RNA–Protein interactions for RNA: ENST00000513595.1

FOXD1-201, Transcript of forkhead box D1, humanhuman

TSL 3

Gene FOXD1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD1-201ENST00000513595 HIST1H2BMQ99879 126 aa9.48□□□□□ -0.89
FOXD1-201ENST00000513595 MRPL16Q9NX20 251 aaKnown RBP9.48□□□□□ -0.89
FOXD1-201ENST00000513595 DNAH6Q9C0G6 4158 aa9.47□□□□□ -0.89
FOXD1-201ENST00000513595 TRGV1A0A0A0MS02 117 aa9.47□□□□□ -0.89
FOXD1-201ENST00000513595 CIDEAO60543 219 aa9.47□□□□□ -0.89
FOXD1-201ENST00000513595 SRIP30626 198 aa9.47□□□□□ -0.89
FOXD1-201ENST00000513595 POM121L12Q8N7R1 296 aa9.47□□□□□ -0.89
FOXD1-201ENST00000513595 ALKBH7Q9BT30 221 aaPredicted RBP9.47□□□□□ -0.89
FOXD1-201ENST00000513595 NOP10Q9NPE3 64 aaKnown RBP9.47□□□□□ -0.89
FOXD1-201ENST00000513595 LAMTOR2Q9Y2Q5 125 aa9.47□□□□□ -0.89
FOXD1-201ENST00000513595 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
FOXD1-201ENST00000513595 NUPR2A6NF83 97 aa9.46□□□□□ -0.9
FOXD1-201ENST00000513595 LYRM9A8MSI8 78 aa9.46□□□□□ -0.9
FOXD1-201ENST00000513595 RS1O15537 224 aa9.46□□□□□ -0.9
FOXD1-201ENST00000513595 CRYGDP07320 174 aa9.46□□□□□ -0.9
FOXD1-201ENST00000513595 MGPP08493 103 aa9.46□□□□□ -0.9
FOXD1-201ENST00000513595 CKS2P33552 79 aa9.46□□□□□ -0.9
FOXD1-201ENST00000513595 OR10J3Q5JRS4 329 aa9.46□□□□□ -0.9
FOXD1-201ENST00000513595 DNAH17Q9UFH2 4485 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 A0A087WWL8 130 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 TRAV4A0A0B4J268 109 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 IGHV4-28A0A0C4DH34 117 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 TEX48A0A1B0GUV7 120 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 D6R8Y8 96 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 PPP1R17O96001 155 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 S100A6P06703 90 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 LINC00315P59091 139 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 Q0VG73 95 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 LGALS9CQ6DKI2 356 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 CDPF1Q6NVV7 123 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 ZFP2Q6ZN57 461 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 Q8NAQ8 132 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 PRELID3AQ96N28 172 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 JPT2Q9H910 190 aa9.45□□□□□ -0.9
FOXD1-201ENST00000513595 FAM74A4Q5TZK3 123 aa9.44□□□□□ -0.9
FOXD1-201ENST00000513595 CFAP126Q5VTH2 177 aa9.44□□□□□ -0.9
FOXD1-201ENST00000513595 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
FOXD1-201ENST00000513595 Q6ZTI0 123 aa9.44□□□□□ -0.9
FOXD1-201ENST00000513595 LINC00612Q8N6U2 182 aa9.44□□□□□ -0.9
FOXD1-201ENST00000513595 C18orf15Q96N68 181 aa9.44□□□□□ -0.9
FOXD1-201ENST00000513595 SAMD10Q9BYL1 202 aa9.44□□□□□ -0.9
FOXD1-201ENST00000513595 F5H697 171 aa9.43□□□□□ -0.9
FOXD1-201ENST00000513595 H7C1H1 209 aa9.43□□□□□ -0.9
FOXD1-201ENST00000513595 EMP1P54849 157 aa9.43□□□□□ -0.9
FOXD1-201ENST00000513595 ZNF56Q15929 161 aa9.43□□□□□ -0.9
FOXD1-201ENST00000513595 COA6Q5JTJ3 125 aaKnown RBP9.43□□□□□ -0.9
FOXD1-201ENST00000513595 UFSP1Q6NVU6 142 aa9.43□□□□□ -0.9
FOXD1-201ENST00000513595 OR4C5Q8NGB2 326 aa9.43□□□□□ -0.9
FOXD1-201ENST00000513595 C18orf32Q8TCD1 76 aa9.43□□□□□ -0.9
FOXD1-201ENST00000513595 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 GAGE12BA1L429 117 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 GAGE7O76087 117 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 GAGE12FP0CL80 117 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 GAGE12GP0CL81 117 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 GAGE12IP0CL82 117 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 NDUFA6P56556 154 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 C11orf68Q9H3H3 251 aaKnown RBP9.42□□□□□ -0.9
FOXD1-201ENST00000513595 PKD1P98161 4303 aa9.42□□□□□ -0.9
FOXD1-201ENST00000513595 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 SMKR1H3BMG3 65 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 TNFRSF6BO95407 300 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 NCR2O95944 276 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 NPYP01303 97 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 SPART-AS1P0CW21 52 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 FAM222AQ5U5X8 452 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 BAGE3Q86Y29 109 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 DKK2Q9UBU2 259 aa9.41□□□□□ -0.9
FOXD1-201ENST00000513595 KLK5Q9Y337 293 aaPredicted RBP9.41□□□□□ -0.9
FOXD1-201ENST00000513595 TRAV26-2A0A0B4J265 109 aa9.4□□□□□ -0.9
FOXD1-201ENST00000513595 PRSS47A8MTI9 375 aa9.4□□□□□ -0.9
FOXD1-201ENST00000513595 IGHV3-53P01767 116 aa9.4□□□□□ -0.9
FOXD1-201ENST00000513595 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
FOXD1-201ENST00000513595 NRACQ8N912 160 aa9.4□□□□□ -0.9
FOXD1-201ENST00000513595 C20orf78Q9BR46 151 aa9.4□□□□□ -0.9
FOXD1-201ENST00000513595 M0QY20 66 aa9.39□□□□□ -0.91
FOXD1-201ENST00000513595 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
FOXD1-201ENST00000513595 NXT2Q9NPJ8 142 aaKnown RBP9.39□□□□□ -0.91
FOXD1-201ENST00000513595 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 C5orf52A6NGY3 159 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 DEFB130BP0DP73 79 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 DEFB130AP0DP74 79 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 GATA1P15976 413 aaPredicted RBP9.38□□□□□ -0.91
FOXD1-201ENST00000513595 PMCHP20382 165 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 DAD1P61803 113 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 RPL32P62910 135 aaKnown RBP9.38□□□□□ -0.91
FOXD1-201ENST00000513595 IQCJQ1A5X6 159 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 PRSS3P2Q8NHM4 247 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
FOXD1-201ENST00000513595 ZNF479Q96JC4 524 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 NIT2Q9NQR4 276 aa9.38□□□□□ -0.91
FOXD1-201ENST00000513595 IGHV3-73A0A0B4J1V6 119 aa9.37□□□□□ -0.91
FOXD1-201ENST00000513595 TRBV10-1A0A0K0K1A3 114 aa9.37□□□□□ -0.91
FOXD1-201ENST00000513595 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
FOXD1-201ENST00000513595 DEFB4AO15263 64 aa9.37□□□□□ -0.91
FOXD1-201ENST00000513595 SERF1AO75920 110 aa9.37□□□□□ -0.91
FOXD1-201ENST00000513595 GAS8-AS1O95177 125 aa9.37□□□□□ -0.91
FOXD1-201ENST00000513595 ESDP10768 282 aa9.37□□□□□ -0.91
FOXD1-201ENST00000513595 HOXA5P20719 270 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms