RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 Q0VG73 95 aa6.17□□□□□ -1.42
TCOF1-212ENST00000513538 C14orf177Q52M58 125 aa6.17□□□□□ -1.42
TCOF1-212ENST00000513538 KRTAP26-1Q6PEX3 210 aa6.17□□□□□ -1.42
TCOF1-212ENST00000513538 C9orf163Q8N9P6 203 aa6.17□□□□□ -1.42
TCOF1-212ENST00000513538 TRAV1-1A0A0B4J248 108 aa6.16□□□□□ -1.42
TCOF1-212ENST00000513538 SCO2A0A1W2PP80 73 aa6.16□□□□□ -1.42
TCOF1-212ENST00000513538 S100A9P06702 114 aaKnown RBP6.16□□□□□ -1.42
TCOF1-212ENST00000513538 H2AFB1P0C5Y9 115 aa6.16□□□□□ -1.42
TCOF1-212ENST00000513538 TPT1P13693 172 aaKnown RBP6.16□□□□□ -1.42
TCOF1-212ENST00000513538 AKR1C3P42330 323 aa6.16□□□□□ -1.42
TCOF1-212ENST00000513538 EIF5AP63241 154 aaKnown RBP6.16□□□□□ -1.42
TCOF1-212ENST00000513538 ELOBQ15370 118 aa6.16□□□□□ -1.42
TCOF1-212ENST00000513538 Q6ZNX1 250 aa6.16□□□□□ -1.42
TCOF1-212ENST00000513538 TCTE3Q8IZS6 198 aa6.16□□□□□ -1.42
TCOF1-212ENST00000513538 OR10G8Q8NGN5 311 aa6.16□□□□□ -1.42
TCOF1-212ENST00000513538 SSBP4Q9BWG4 385 aaPredicted RBP6.16□□□□□ -1.42
TCOF1-212ENST00000513538 TNXBP22105 4242 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 TRBV7-3A0A075B6L6 115 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 TMSB15BA0A087X1C1 80 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 TRBV6-8A0A0A6YYG3 113 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 TRBV10-1A0A0K0K1A3 114 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 A0A1B0GV50 99 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 TMEM262E9PQX1 116 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 M0R381 172 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 CRPP02741 224 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 CXCL1P09341 107 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 RPL36AP83881 106 aaKnown RBP6.15□□□□□ -1.42
TCOF1-212ENST00000513538 ODF1Q14990 250 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 CLPSL2Q6UWE3 100 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 SDIM1Q6ZPB5 146 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 RPL36ALQ969Q0 106 aaKnown RBP6.15□□□□□ -1.42
TCOF1-212ENST00000513538 C11orf52Q96A22 123 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 PHLDA3Q9Y5J5 127 aa6.15□□□□□ -1.42
TCOF1-212ENST00000513538 SNAI2O43623 268 aa6.14□□□□□ -1.43
TCOF1-212ENST00000513538 ANGP03950 147 aaKnown RBP6.14□□□□□ -1.43
TCOF1-212ENST00000513538 SULT1A2P50226 295 aa6.14□□□□□ -1.43
TCOF1-212ENST00000513538 RAB5CP51148 216 aa6.14□□□□□ -1.43
TCOF1-212ENST00000513538 RPL19P84098 196 aaKnown RBP6.14□□□□□ -1.43
TCOF1-212ENST00000513538 CIRBPQ14011 172 aaKnown RBP6.14□□□□□ -1.43
TCOF1-212ENST00000513538 KCNIP4Q6PIL6 250 aa6.14□□□□□ -1.43
TCOF1-212ENST00000513538 Q6ZRU5 148 aa6.14□□□□□ -1.43
TCOF1-212ENST00000513538 NTM-AS1Q6ZSK4 140 aa6.14□□□□□ -1.43
TCOF1-212ENST00000513538 BAGE2Q86Y30 109 aa6.14□□□□□ -1.43
TCOF1-212ENST00000513538 PRR34Q9NV39 138 aa6.14□□□□□ -1.43
TCOF1-212ENST00000513538 PFDN1O60925 122 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 CHTF8P0CG12 524 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 MIAQ16674 131 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 DGAT2L7PQ6IED9 249 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 PRR27Q6MZM9 219 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 ZFP82Q8N141 532 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 DERL1Q9BUN8 251 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 MANBALQ9NQG1 85 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 LRP2P98164 4655 aa6.13□□□□□ -1.43
TCOF1-212ENST00000513538 SLPIP03973 132 aa6.12□□□□□ -1.43
TCOF1-212ENST00000513538 OR5AL1P0C617 328 aa6.12□□□□□ -1.43
TCOF1-212ENST00000513538 RPL35P42766 123 aaKnown RBP6.12□□□□□ -1.43
TCOF1-212ENST00000513538 RBX1P62877 108 aa6.12□□□□□ -1.43
TCOF1-212ENST00000513538 OR10AG1Q8NH19 301 aa6.12□□□□□ -1.43
TCOF1-212ENST00000513538 CHCHD5Q9BSY4 110 aa6.12□□□□□ -1.43
TCOF1-212ENST00000513538 KIF25-AS1Q9Y6Z4 181 aa6.12□□□□□ -1.43
TCOF1-212ENST00000513538 TRBV20OR9-2A0A075B6H5 130 aa6.11□□□□□ -1.43
TCOF1-212ENST00000513538 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
TCOF1-212ENST00000513538 RAB4BP61018 213 aa6.11□□□□□ -1.43
TCOF1-212ENST00000513538 CNBPP62633 177 aaKnown RBP6.11□□□□□ -1.43
TCOF1-212ENST00000513538 GAGE6Q13070 117 aa6.11□□□□□ -1.43
TCOF1-212ENST00000513538 EIF5AL1Q6IS14 154 aaKnown RBP6.11□□□□□ -1.43
TCOF1-212ENST00000513538 SLC51BQ86UW2 128 aa6.11□□□□□ -1.43
TCOF1-212ENST00000513538 LINC00269Q8N2A0 174 aa6.11□□□□□ -1.43
TCOF1-212ENST00000513538 GNG13Q9P2W3 67 aa6.11□□□□□ -1.43
TCOF1-212ENST00000513538 IGLV10-54A0A075B6I4 117 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 A0A087WYN8 130 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 MUC21A0A0G2JKD1 596 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 MUC21A0A140T8X8 626 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 TMEM238LA0A1B0GVL6 79 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 IGLC6P0CF74 106 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 MEF2BQ02080 365 aaPredicted RBP6.1□□□□□ -1.43
TCOF1-212ENST00000513538 ZNF56Q15929 161 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 C9orf62Q8N4C0 152 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 SPACA4Q8TDM5 124 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 SMIM12Q96EX1 92 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 VAX2Q9UIW0 290 aa6.1□□□□□ -1.43
TCOF1-212ENST00000513538 RAB19A4D1S5 217 aa6.09□□□□□ -1.43
TCOF1-212ENST00000513538 TEX46H3BTG2 121 aa6.09□□□□□ -1.43
TCOF1-212ENST00000513538 CENPWQ5EE01 88 aa6.09□□□□□ -1.43
TCOF1-212ENST00000513538 GFRA4Q9GZZ7 299 aa6.09□□□□□ -1.43
TCOF1-212ENST00000513538 PHOX2AO14813 284 aa6.08□□□□□ -1.44
TCOF1-212ENST00000513538 PDE6DO43924 150 aa6.08□□□□□ -1.44
TCOF1-212ENST00000513538 BCL2P10415 239 aa6.08□□□□□ -1.44
TCOF1-212ENST00000513538 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.08□□□□□ -1.44
TCOF1-212ENST00000513538 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
TCOF1-212ENST00000513538 LYPD6BQ8NI32 183 aa6.08□□□□□ -1.44
TCOF1-212ENST00000513538 IGLV4-60A0A075B6I1 120 aa6.07□□□□□ -1.44
TCOF1-212ENST00000513538 hDV102S1A0JD36 115 aa6.07□□□□□ -1.44
TCOF1-212ENST00000513538 GZMBP10144 247 aa6.07□□□□□ -1.44
TCOF1-212ENST00000513538 PKIAP61925 76 aa6.07□□□□□ -1.44
TCOF1-212ENST00000513538 REG3AQ06141 175 aa6.07□□□□□ -1.44
TCOF1-212ENST00000513538 IQCJQ1A5X6 159 aa6.07□□□□□ -1.44
TCOF1-212ENST00000513538 CLRN3Q8NCR9 226 aa6.07□□□□□ -1.44
TCOF1-212ENST00000513538 PLAC8Q9NZF1 115 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms