RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 UCHL1P09936 223 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 UBBP0CG47 229 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 AQP4P55087 323 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 TPPP2P59282 170 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 FXYD4P59646 89 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 POLR2GP62487 172 aaKnown RBP eCLIP1.2□□□□□ -2.22
CHD1-210ENST00000513064 AKR1C1Q04828 323 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 FXYD3Q14802 87 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 NEDD8Q15843 81 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 RTL8BQ17RB0 113 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 MPV17LQ2QL34 196 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 MORN2Q502X0 79 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 RPL39P5Q59GN2 51 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 AADACL3Q5VUY0 350 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 XAF1Q6GPH4 301 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 Q6ZTI0 123 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 OR11H6Q8NGC7 330 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 OR10J5Q8NHC4 309 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 MRPL30Q8TCC3 161 aaKnown RBP1.2□□□□□ -2.22
CHD1-210ENST00000513064 DYNLRB2Q8TF09 96 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 ARHGAP5-AS1Q96IT6 56 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 SIGMAR1Q99720 223 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 NABP2Q9BQ15 211 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 FAM103A1Q9BTL3 118 aaKnown RBP1.2□□□□□ -2.22
CHD1-210ENST00000513064 C8orf4Q9NR00 106 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 UQCC1Q9NVA1 299 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 METTL1Q9UBP6 276 aaKnown RBP1.2□□□□□ -2.22
CHD1-210ENST00000513064 NF1P21359 2839 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 MXRA5Q9NR99 2828 aa1.2□□□□□ -2.22
CHD1-210ENST00000513064 CSMD2Q7Z408 3487 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 A0A087WXM4 84 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 MEIS3P1A6NDR6 274 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 CCDC160A6NGH7 325 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 G3V318 75 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 SLC22A1O15245 554 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 YPEL1O60688 119 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 PGLYRP1O75594 196 aaPredicted RBP1.19□□□□□ -2.22
CHD1-210ENST00000513064 SNAPC5O75971 98 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 CRYZL1O95825 349 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 IGKV1-5P01602 117 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 PMP2P02689 132 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 PRM2P04554 102 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 CSN2P05814 226 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 SAA2P0DJI9 122 aaPredicted RBP1.19□□□□□ -2.22
CHD1-210ENST00000513064 S100GP29377 79 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 DYNLT3P51808 116 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 ERHP84090 104 aaKnown RBP1.19□□□□□ -2.22
CHD1-210ENST00000513064 DEFA5Q01523 94 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 SLC38A11Q08AI6 406 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 VMA21Q3ZAQ7 101 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 TMEM97Q5BJF2 176 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 IDO2Q6ZQW0 420 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 Q6ZRN7 208 aaPredicted RBP1.19□□□□□ -2.22
CHD1-210ENST00000513064 LINC00311Q8N616 119 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 C5orf56Q8N8D9 126 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 SPACA4Q8TDM5 124 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 S100A16Q96FQ6 103 aaKnown RBP1.19□□□□□ -2.22
CHD1-210ENST00000513064 YPEL2Q96QA6 119 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 HSPB9Q9BQS6 159 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 DERL1Q9BUN8 251 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 LPAR5Q9H1C0 372 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 XAGE1AQ9HD64 81 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 DOK5Q9P104 306 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 COMMD3Q9UBI1 195 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 JPT1Q9UK76 154 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 PAIP2BQ9ULR5 123 aaKnown RBP1.19□□□□□ -2.22
CHD1-210ENST00000513064 TIMM9Q9Y5J7 89 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 NOTCH1P46531 2555 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 NBEAL1Q6ZS30 2694 aa1.19□□□□□ -2.22
CHD1-210ENST00000513064 IGKV3-7A0A075B6H7 116 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 TRAV1-2A0A0B4J238 106 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 TRDV1A0A1B0GX56 115 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 TMEM14DPA8MWL7 114 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 H7C2G1 150 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 K7EIL1 84 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 CYB5BO43169 146 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 DHFRP00374 187 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 PRH1P02810 166 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 TRAPPC2P0DI81 140 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 TRAPPC2BP0DI82 140 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 SULT1A3P0DMM9 295 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 SULT1A4P0DMN0 295 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 NFYAP23511 347 aaPredicted RBP1.18□□□□□ -2.22
CHD1-210ENST00000513064 HIST1H2BOP23527 126 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 HIST1H2BBP33778 126 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 SDC2P34741 201 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 EIF2B2P49770 351 aaKnown RBP1.18□□□□□ -2.22
CHD1-210ENST00000513064 HIST1H2BDP58876 126 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 TMEM258P61165 79 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 HIST1H2BCP62807 126 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 SUPT4H1P63272 117 aaKnown RBP1.18□□□□□ -2.22
CHD1-210ENST00000513064 CCL20P78556 96 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 CATR1Q13166 79 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 HMGN3Q15651 99 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 HIST2H2BEQ16778 126 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 SCGB2B2Q4G0G5 96 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 Q56UQ5 140 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.18□□□□□ -2.22
CHD1-210ENST00000513064 HACD4Q5VWC8 232 aa1.18□□□□□ -2.22
CHD1-210ENST00000513064 LYZL1Q6UWQ5 148 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms