RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 Q8N8P6 123 aa2□□□□□ -2.09
RFC1-214ENST00000512726 KTN1Q86UP2 1357 aaKnown RBP1.99□□□□□ -2.09
RFC1-214ENST00000512726 CORTO00230 105 aa1.99□□□□□ -2.09
RFC1-214ENST00000512726 MRPS10P82664 201 aaKnown RBP1.99□□□□□ -2.09
RFC1-214ENST00000512726 PPP3R2Q96LZ3 170 aa1.99□□□□□ -2.09
RFC1-214ENST00000512726 V9GYV3 84 aa1.99□□□□□ -2.09
RFC1-214ENST00000512726 A0A096LNT2 108 aa1.98□□□□□ -2.09
RFC1-214ENST00000512726 TRBV7-1A0A0A6YYK4 115 aa1.98□□□□□ -2.09
RFC1-214ENST00000512726 ZNF137PP52743 207 aa1.98□□□□□ -2.09
RFC1-214ENST00000512726 TPPP2P59282 170 aa1.98□□□□□ -2.09
RFC1-214ENST00000512726 CATR1Q13166 79 aa1.98□□□□□ -2.09
RFC1-214ENST00000512726 ARFGEF1Q9Y6D6 1849 aa1.98□□□□□ -2.09
RFC1-214ENST00000512726 FAM135AQ9P2D6 1515 aa1.97□□□□□ -2.09
RFC1-214ENST00000512726 CUL7Q14999 1698 aa1.97□□□□□ -2.09
RFC1-214ENST00000512726 A0A087WTM6 91 aa1.97□□□□□ -2.09
RFC1-214ENST00000512726 TNFP01375 233 aa1.97□□□□□ -2.09
RFC1-214ENST00000512726 GNG4P50150 75 aa1.97□□□□□ -2.09
RFC1-214ENST00000512726 C6orf52Q5T4I8 152 aa1.97□□□□□ -2.09
RFC1-214ENST00000512726 QRICH2Q9H0J4 1663 aa1.96□□□□□ -2.1
RFC1-214ENST00000512726 INSL4Q14641 139 aa1.96□□□□□ -2.1
RFC1-214ENST00000512726 MRPL54Q6P161 138 aaKnown RBP1.96□□□□□ -2.1
RFC1-214ENST00000512726 MYOM2P54296 1465 aa1.95□□□□□ -2.1
RFC1-214ENST00000512726 TRAV13-2A0A0B4J235 113 aa1.95□□□□□ -2.1
RFC1-214ENST00000512726 RIMS1Q86UR5 1692 aaKnown RBP1.95□□□□□ -2.1
RFC1-214ENST00000512726 LOC285556D6RIA3 1793 aa1.95□□□□□ -2.1
RFC1-214ENST00000512726 HCG22E2RYF7 251 aa1.94□□□□□ -2.1
RFC1-214ENST00000512726 S100A1P23297 94 aa1.94□□□□□ -2.1
RFC1-214ENST00000512726 EDDM3BP56851 147 aa1.94□□□□□ -2.1
RFC1-214ENST00000512726 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
RFC1-214ENST00000512726 CASKIN1Q8WXD9 1431 aa1.93□□□□□ -2.1
RFC1-214ENST00000512726 SIX6O95475 246 aa1.93□□□□□ -2.1
RFC1-214ENST00000512726 C8orf59Q8N0T1 100 aaPredicted RBP1.93□□□□□ -2.1
RFC1-214ENST00000512726 SPANXDQ9BXN6 97 aa1.93□□□□□ -2.1
RFC1-214ENST00000512726 LINC00312Q9Y6C7 94 aa1.93□□□□□ -2.1
RFC1-214ENST00000512726 PATJQ8NI35 1801 aa1.92□□□□□ -2.1
RFC1-214ENST00000512726 MYH8P13535 1937 aa1.92□□□□□ -2.1
RFC1-214ENST00000512726 CLPSL1A2RUU4 121 aa1.92□□□□□ -2.1
RFC1-214ENST00000512726 CGREF1Q99674 301 aa1.92□□□□□ -2.1
RFC1-214ENST00000512726 F5P12259 2224 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 TANC1Q9C0D5 1861 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 F2Z2F3 143 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 S100PP25815 95 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 PPP3R1P63098 170 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 C9orf153Q5TBE3 101 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 AQP10Q96PS8 301 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 IER3IP1Q9Y5U9 82 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 FBN3Q75N90 2809 aa1.91□□□□□ -2.1
RFC1-214ENST00000512726 LRRC37A3O60309 1634 aa1.9□□□□□ -2.11
RFC1-214ENST00000512726 TENM1Q9UKZ4 2725 aa1.89□□□□□ -2.11
RFC1-214ENST00000512726 ASH1LQ9NR48 2969 aaKnown RBP1.89□□□□□ -2.11
RFC1-214ENST00000512726 ARAP2Q8WZ64 1704 aa1.89□□□□□ -2.11
RFC1-214ENST00000512726 A0A0D9SG42 100 aa1.87□□□□□ -2.11
RFC1-214ENST00000512726 OOSP1A8MZH6 123 aa1.87□□□□□ -2.11
RFC1-214ENST00000512726 PRB3Q04118 309 aaPredicted RBP1.87□□□□□ -2.11
RFC1-214ENST00000512726 Q96NJ1 140 aa1.87□□□□□ -2.11
RFC1-214ENST00000512726 DOCK1Q14185 1865 aa1.86□□□□□ -2.11
RFC1-214ENST00000512726 CPSF1Q10570 1443 aaKnown RBP1.86□□□□□ -2.11
RFC1-214ENST00000512726 C5orf38Q86SI9 138 aa1.86□□□□□ -2.11
RFC1-214ENST00000512726 BPESC1Q9GZL8 116 aa1.86□□□□□ -2.11
RFC1-214ENST00000512726 SCP2D1Q9UJQ7 156 aa1.86□□□□□ -2.11
RFC1-214ENST00000512726 DOCK2Q92608 1830 aa1.86□□□□□ -2.11
RFC1-214ENST00000512726 ZNF462Q96JM2 2506 aa1.86□□□□□ -2.11
RFC1-214ENST00000512726 TNS1Q9HBL0 1735 aaKnown RBP1.85□□□□□ -2.11
RFC1-214ENST00000512726 SIPA1L3O60292 1781 aaPredicted RBP1.85□□□□□ -2.11
RFC1-214ENST00000512726 DOCK11Q5JSL3 2073 aa1.84□□□□□ -2.11
RFC1-214ENST00000512726 SSSCA1O60232 199 aa1.84□□□□□ -2.11
RFC1-214ENST00000512726 ACYP2P14621 99 aa1.84□□□□□ -2.11
RFC1-214ENST00000512726 C10orf128Q5T292 105 aa1.84□□□□□ -2.11
RFC1-214ENST00000512726 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.84□□□□□ -2.11
RFC1-214ENST00000512726 PXDNQ92626 1479 aa1.83□□□□□ -2.12
RFC1-214ENST00000512726 C20orf202A1L168 122 aa1.83□□□□□ -2.12
RFC1-214ENST00000512726 SMIM6P0DI80 62 aa1.83□□□□□ -2.12
RFC1-214ENST00000512726 PI4KAP42356 2102 aa1.83□□□□□ -2.12
RFC1-214ENST00000512726 SVBPQ8N300 66 aa1.83□□□□□ -2.12
RFC1-214ENST00000512726 TTC9CQ8N5M4 171 aa1.83□□□□□ -2.12
RFC1-214ENST00000512726 SMIM11BQ8TCY0 68 aa1.83□□□□□ -2.12
RFC1-214ENST00000512726 PPIP5K1Q6PFW1 1433 aa1.83□□□□□ -2.12
RFC1-214ENST00000512726 COMMD6Q7Z4G1 85 aa1.82□□□□□ -2.12
RFC1-214ENST00000512726 CDK13Q14004 1512 aaKnown RBP1.81□□□□□ -2.12
RFC1-214ENST00000512726 ROBO1Q9Y6N7 1651 aa1.81□□□□□ -2.12
RFC1-214ENST00000512726 TRGV1A0A0A0MS02 117 aa1.81□□□□□ -2.12
RFC1-214ENST00000512726 FAM24AA6NFZ4 105 aa1.81□□□□□ -2.12
RFC1-214ENST00000512726 WFDC6Q9BQY6 131 aa1.81□□□□□ -2.12
RFC1-214ENST00000512726 TCEAL7Q9BRU2 100 aa1.81□□□□□ -2.12
RFC1-214ENST00000512726 CYP4F30PQ9H0H9 118 aa1.81□□□□□ -2.12
RFC1-214ENST00000512726 CRCT1Q9UGL9 99 aa1.81□□□□□ -2.12
RFC1-214ENST00000512726 MAPKBP1O60336 1514 aa1.81□□□□□ -2.12
RFC1-214ENST00000512726 GTF2H5Q6ZYL4 71 aa1.8□□□□□ -2.12
RFC1-214ENST00000512726 NAV3Q8IVL0 2385 aa1.8□□□□□ -2.12
RFC1-214ENST00000512726 PZPP20742 1482 aa1.8□□□□□ -2.12
RFC1-214ENST00000512726 NRKQ7Z2Y5 1582 aa1.8□□□□□ -2.12
RFC1-214ENST00000512726 GVQW2A0A096LPI5 108 aaPredicted RBP1.79□□□□□ -2.12
RFC1-214ENST00000512726 PRR15LQ9BU68 103 aa1.79□□□□□ -2.12
RFC1-214ENST00000512726 UBE2L5PA0A1B0GUS4 154 aa1.78□□□□□ -2.12
RFC1-214ENST00000512726 PPP1R17O96001 155 aa1.78□□□□□ -2.12
RFC1-214ENST00000512726 IFITM1P13164 125 aa1.78□□□□□ -2.12
RFC1-214ENST00000512726 UBE2L3P68036 154 aaKnown RBP1.78□□□□□ -2.12
RFC1-214ENST00000512726 VMO1Q7Z5L0 202 aa1.78□□□□□ -2.12
RFC1-214ENST00000512726 PRDM2Q13029 1718 aa1.77□□□□□ -2.13
RFC1-214ENST00000512726 ATP5EP56381 51 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms