RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 RIGQ13278 110 aa10.78□□□□□ -0.68
SGCA-208ENST00000512526 SMIM15Q7Z3B0 74 aa10.78□□□□□ -0.68
SGCA-208ENST00000512526 RPL36ALQ969Q0 106 aaKnown RBP10.78□□□□□ -0.68
SGCA-208ENST00000512526 ANAPC16Q96DE5 110 aa10.78□□□□□ -0.68
SGCA-208ENST00000512526 LELP1Q5T871 98 aa10.77□□□□□ -0.69
SGCA-208ENST00000512526 TMEM191AQ9H0A3 160 aa10.77□□□□□ -0.69
SGCA-208ENST00000512526 NBDYA0A0U1RRE5 68 aa10.76□□□□□ -0.69
SGCA-208ENST00000512526 H7C1H1 209 aa10.76□□□□□ -0.69
SGCA-208ENST00000512526 SIVA1O15304 175 aa10.76□□□□□ -0.69
SGCA-208ENST00000512526 GATD1Q8NB37 220 aa10.76□□□□□ -0.69
SGCA-208ENST00000512526 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
SGCA-208ENST00000512526 RASL11AQ6T310 242 aa10.75□□□□□ -0.69
SGCA-208ENST00000512526 WFDC10BQ8IUB3 73 aa10.75□□□□□ -0.69
SGCA-208ENST00000512526 RNF185Q96GF1 192 aa10.75□□□□□ -0.69
SGCA-208ENST00000512526 CARHSP1Q9Y2V2 147 aaKnown RBP10.75□□□□□ -0.69
SGCA-208ENST00000512526 KRTAP1-5Q9BYS1 174 aa10.74□□□□□ -0.69
SGCA-208ENST00000512526 NIT2Q9NQR4 276 aa10.74□□□□□ -0.69
SGCA-208ENST00000512526 A0A087WWC5 75 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 TRAV8-6A0A0B4J262 113 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 A0A1B0GW15 77 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 A0A1B0GXF2 115 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 DNAH10OSP0CZ25 163 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 RAB4AP20338 218 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 FRZBQ92765 325 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 TNFRSF18Q9Y5U5 241 aa10.73□□□□□ -0.69
SGCA-208ENST00000512526 OR10J3Q5JRS4 329 aa10.72□□□□□ -0.69
SGCA-208ENST00000512526 DAZ4Q86SG3 579 aaKnown RBP10.72□□□□□ -0.69
SGCA-208ENST00000512526 AMN1Q8IY45 258 aa10.72□□□□□ -0.69
SGCA-208ENST00000512526 CTDSP1Q9GZU7 261 aa10.72□□□□□ -0.69
SGCA-208ENST00000512526 DAZ3Q9NR90 486 aaKnown RBP10.72□□□□□ -0.69
SGCA-208ENST00000512526 DNAH17Q9UFH2 4485 aa10.72□□□□□ -0.69
SGCA-208ENST00000512526 FRAS1Q86XX4 4008 aa10.71□□□□□ -0.69
SGCA-208ENST00000512526 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.69
SGCA-208ENST00000512526 GAS8-AS1O95177 125 aa10.71□□□□□ -0.69
SGCA-208ENST00000512526 TTC32Q5I0X7 151 aa10.71□□□□□ -0.69
SGCA-208ENST00000512526 MRPL54Q6P161 138 aaKnown RBP10.71□□□□□ -0.69
SGCA-208ENST00000512526 IMMP2LQ96T52 175 aa10.71□□□□□ -0.69
SGCA-208ENST00000512526 FAT2Q9NYQ8 4349 aa10.7□□□□□ -0.7
SGCA-208ENST00000512526 TRBV6-8A0A0A6YYG3 113 aa10.7□□□□□ -0.7
SGCA-208ENST00000512526 CAMPP49913 170 aa10.7□□□□□ -0.7
SGCA-208ENST00000512526 HBBP68871 147 aa10.7□□□□□ -0.7
SGCA-208ENST00000512526 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
SGCA-208ENST00000512526 FAM104BQ5XKR9 115 aa10.7□□□□□ -0.7
SGCA-208ENST00000512526 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
SGCA-208ENST00000512526 ATP5L2Q7Z4Y8 100 aa10.7□□□□□ -0.7
SGCA-208ENST00000512526 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
SGCA-208ENST00000512526 C7orf77A4D0Y5 90 aa10.69□□□□□ -0.7
SGCA-208ENST00000512526 K7EP13 123 aa10.69□□□□□ -0.7
SGCA-208ENST00000512526 RTL8CO15255 209 aa10.69□□□□□ -0.7
SGCA-208ENST00000512526 C1orf134Q5TEV5 83 aa10.69□□□□□ -0.7
SGCA-208ENST00000512526 CLRN3Q8NCR9 226 aa10.69□□□□□ -0.7
SGCA-208ENST00000512526 MRAP2Q96G30 205 aa10.69□□□□□ -0.7
SGCA-208ENST00000512526 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
SGCA-208ENST00000512526 TRAV9-2A0A087WT02 112 aa10.68□□□□□ -0.7
SGCA-208ENST00000512526 TRBV6-5A0A0K0K1A5 114 aa10.68□□□□□ -0.7
SGCA-208ENST00000512526 S100A8P05109 93 aa10.68□□□□□ -0.7
SGCA-208ENST00000512526 BTF3P20290 206 aaKnown RBP10.68□□□□□ -0.7
SGCA-208ENST00000512526 TMEM97Q5BJF2 176 aa10.68□□□□□ -0.7
SGCA-208ENST00000512526 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.68□□□□□ -0.7
SGCA-208ENST00000512526 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
SGCA-208ENST00000512526 NIT1Q86X76 327 aa10.67□□□□□ -0.7
SGCA-208ENST00000512526 C6orf223Q8N319 242 aa10.67□□□□□ -0.7
SGCA-208ENST00000512526 BTF3L4Q96K17 158 aa10.67□□□□□ -0.7
SGCA-208ENST00000512526 RPS10P46783 165 aaKnown RBP10.66□□□□□ -0.7
SGCA-208ENST00000512526 RHEBQ15382 184 aa10.66□□□□□ -0.7
SGCA-208ENST00000512526 SLC7A5P1Q8MH63 180 aa10.66□□□□□ -0.7
SGCA-208ENST00000512526 Q8N3U1 123 aa10.66□□□□□ -0.7
SGCA-208ENST00000512526 SMKR1H3BMG3 65 aa10.65□□□□□ -0.7
SGCA-208ENST00000512526 IQCJQ1A5X6 159 aa10.65□□□□□ -0.7
SGCA-208ENST00000512526 NRACQ8N912 160 aa10.65□□□□□ -0.7
SGCA-208ENST00000512526 SDHAF1A6NFY7 115 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 IBA57-AS1B1ANH7 110 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 IGHV3-30P01768 117 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 IGHV3-33P01772 117 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 APOC3P02656 99 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 IGHV3-30-3P0DP02 117 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 IGHV3-30-5P0DP03 117 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
SGCA-208ENST00000512526 C10orf126Q8N4M7 172 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 RPS10P5Q9NQ39 176 aa10.64□□□□□ -0.71
SGCA-208ENST00000512526 TRAV9-1A0A075B6T8 112 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 NCR2O95944 276 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 PPP1R17O96001 155 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 KCNIP4Q6PIL6 250 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 SVBPQ8N300 66 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 DEFB104AQ8WTQ1 72 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 TMEM70Q9BUB7 260 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 ST20Q9HBF5 79 aa10.63□□□□□ -0.71
SGCA-208ENST00000512526 TRBV24-1A0A075B6N3 115 aa10.62□□□□□ -0.71
SGCA-208ENST00000512526 TRBV25-1A0A075B6N4 114 aa10.62□□□□□ -0.71
SGCA-208ENST00000512526 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
SGCA-208ENST00000512526 COTL1Q14019 142 aa10.62□□□□□ -0.71
SGCA-208ENST00000512526 NDUFA5Q16718 116 aa10.62□□□□□ -0.71
SGCA-208ENST00000512526 Q6ZRN7 208 aaPredicted RBP10.62□□□□□ -0.71
SGCA-208ENST00000512526 CHCHD7Q9BUK0 85 aa10.62□□□□□ -0.71
SGCA-208ENST00000512526 TRBV27A0A0K0K1C4 114 aa10.61□□□□□ -0.71
SGCA-208ENST00000512526 TMEM262E9PQX1 116 aa10.61□□□□□ -0.71
SGCA-208ENST00000512526 I3L3M4 83 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms