RNA–Protein interactions for RNA: ENST00000512331.5

RUFY3-210, Transcript of RUN and FYVE domain containing 3, human

TSL 3

Gene RUFY3, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-210	ENST00000512331	HBB	P68871	147 aa		4.64	□□□□□ -1.67
RUFY3-210	ENST00000512331	FOXI2	Q6ZQN5	318 aa		4.64	□□□□□ -1.67
RUFY3-210	ENST00000512331	ATP5L2	Q7Z4Y8	100 aa		4.64	□□□□□ -1.67
RUFY3-210	ENST00000512331	APRG1	Q8IVJ8	170 aa		4.64	□□□□□ -1.67
RUFY3-210	ENST00000512331	SPATA3	Q8NHX4	192 aa		4.64	□□□□□ -1.67
RUFY3-210	ENST00000512331	GNB1L	Q9BYB4	327 aa		4.64	□□□□□ -1.67
RUFY3-210	ENST00000512331	GEMIN7	Q9H840	131 aa	Known RBP	4.64	□□□□□ -1.67
RUFY3-210	ENST00000512331	NAGK	Q9UJ70	344 aa		4.64	□□□□□ -1.67
RUFY3-210	ENST00000512331	STAB1	Q9NY15	2570 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	TRAV25	A0A0B4J276	109 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	TRAV21	A0A0B4J279	112 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	MUC21	A0A0G2JKD1	596 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	MUC21	A0A140T8X8	626 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	OR4C46	A6NHA9	309 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	KLLN	B2CW77	178 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331		M0R2Z0	102 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	HLA-DQA1	P01909	254 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	MT-ND6	P03923	174 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	S100A6	P06703	90 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	GPX1	P07203	203 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	HLA-DRB4	P13762	266 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	RNASE4	P34096	147 aa	Known RBP	4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	CTRL	P40313	264 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	FOXA3	P55318	350 aa	Predicted RBP	4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	SLA	Q13239	276 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	SPINK13	Q1W4C9	94 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	COX19	Q49B96	90 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331		Q6AWC8	147 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	EBLN2	Q6P2I7	272 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	RASL11A	Q6T310	242 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	LYZL1	Q6UWQ5	148 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	AMTN	Q6UX39	209 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331		Q6ZTC4	211 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	FER1L6-AS1	Q8NA97	138 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	GATD1	Q8NB37	220 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	ODF3	Q96PU9	254 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	HLA-DRB4	X5D2U9	266 aa		4.63	□□□□□ -1.67
RUFY3-210	ENST00000512331	NOTCH3	Q9UM47	2321 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331	TRAV12-2	A0A075B6T6	113 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331		A0A1B0GUT8	65 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331	C7orf71	A4D174	169 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331		A8MTW9	85 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331		F2Z2F3	143 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331		H3BVH4	76 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331	IGLV1-51	P01701	117 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331	APCS	P02743	223 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331	FXYD7	P58549	80 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331	PDZD11	Q5EBL8	140 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331	TP53TG3	Q9ULZ0	132 aa		4.62	□□□□□ -1.67
RUFY3-210	ENST00000512331	DNAH3	Q8TD57	4116 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	IGHV1OR15-1	A0A075B7D0	117 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	TRAV12-3	A0A0B4J271	114 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	KRTAP16-1	A8MUX0	517 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331		H3BMM0	161 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	RBMY1A1	P0DJD3	496 aa	Known RBP	4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	SRI	P30626	198 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	CDKN1B	P46527	198 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	RBMY1F	Q15415	496 aa	Known RBP	4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	PRR4	Q16378	134 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	IQCJ	Q1A5X6	159 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	HIGD2B	Q4VC39	106 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	HIST3H2BB	Q8N257	126 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	OR10AG1	Q8NH19	301 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	BORCS7	Q96B45	105 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	WFDC10A	Q9H1F0	79 aa		4.61	□□□□□ -1.67
RUFY3-210	ENST00000512331	TRRAP	Q9Y4A5	3859 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	IGLV8-61	A0A075B6I0	122 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331		A0A1B0GW15	77 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	OR11H12	B2RN74	326 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	CRX	O43186	299 aa	Predicted RBP	4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	GNRH2	O43555	120 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	SNAI2	O43623	268 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	CD7	P09564	240 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	TSPO	P30536	169 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	COA6	Q5JTJ3	125 aa	Known RBP	4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	KRTAP7-1	Q8IUC3	87 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	TMEM256	Q8N2U0	113 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	OR2K2	Q8NGT1	345 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	CNFN	Q9BYD5	112 aa		4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.6	□□□□□ -1.67
RUFY3-210	ENST00000512331	NUPR1	O60356	82 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	ZNF324	O75467	553 aa	Predicted RBP	4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	SERF1A	O75920	110 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	S100A8	P05109	93 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	OR5AL1	P0C617	328 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	RNASE3	P12724	160 aa	Known RBP	4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	GATA1	P15976	413 aa	Predicted RBP	4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	NTF3	P20783	257 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	ASIP	P42127	132 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	AKR1D1	P51857	326 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	ZNF493	Q6ZR52	646 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	AMN1	Q8IY45	258 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	C18orf32	Q8TCD1	76 aa		4.59	□□□□□ -1.67
RUFY3-210	ENST00000512331	ANK2	Q01484	3957 aa		4.59	□□□□□ -1.68
RUFY3-210	ENST00000512331	SMKR1	H3BMG3	65 aa		4.58	□□□□□ -1.68
RUFY3-210	ENST00000512331		M0R381	172 aa		4.58	□□□□□ -1.68
RUFY3-210	ENST00000512331	NCR2	O95944	276 aa		4.58	□□□□□ -1.68
RUFY3-210	ENST00000512331	MT3	P25713	68 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms