RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SH2D6Q7Z4S9 175 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 NKAPP1Q8N9T2 125 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 TSKUQ8WUA8 353 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 C11orf52Q96A22 123 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 HHLA3Q9XRX5 114 aa3.72□□□□□ -1.81
TRAPPC11-208ENST00000511955 A8MWL6 223 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 INS-IGF2F8WCM5 200 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGKV1-5P01602 117 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGHV3-7P01780 117 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGHV4-38-2P0DP08 117 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 COX8AP10176 69 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 COX7CP15954 63 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 CBLN1P23435 193 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 LINC01545Q5VT33 79 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 MIC13Q5XKP0 118 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 ZNF702PQ9H963 129 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 HIVEP2P31629 2446 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 MDFIC2A0A1B0GVS7 189 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 INAFM1C9JVW0 142 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 BUB1B-PAK6H3BSN5 160 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 HLA-DQA1P01909 254 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 TMEM136Q6ZRR5 245 aa3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 FGF23Q9GZV9 251 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC11-208ENST00000511955 ABCA1O95477 2261 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGHV3-38A0A0C4DH36 116 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 SMIM13P0DJ93 91 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 S100A4P26447 101 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 UBE2BP63146 152 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 CCL28Q9NRJ3 127 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 TNFRSF19Q9NS68 423 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 TAS2R4Q9NYW5 299 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 ZNF492Q9P255 531 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 RABAC1Q9UI14 185 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 C2orf70A6NJV1 201 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 K7EQG2 157 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 TCL1BO95988 128 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 RNASE1P07998 156 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 SS18Q15532 418 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 LYPD2Q6UXB3 125 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 PHF5AQ7RTV0 110 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 SLC25A2Q9BXI2 301 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 PRO0461Q9UI25 63 aa3.7□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGKV1-9A0A0C4DH69 117 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGLV3-1P01715 115 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGHV3-43DP0DP04 118 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 DYNLT3P51808 116 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 RPL30P62888 115 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 PRB3Q04118 309 aaPredicted RBP3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 NMSQ5H8A3 153 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 FAM19A2Q8N3H0 131 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 GTSF1Q8WW33 167 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 DPH3P1Q9H4G8 78 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 IL36BQ9NZH7 164 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 HILPDAQ9Y5L2 63 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 ATRQ13535 2644 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 NAV3Q8IVL0 2385 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGLV5-52A0A0A0MRZ9 124 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 LY6G6DO95868 133 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGLV2-8P01709 118 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 SLC25A16P16260 332 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 PDPNQ86YL7 162 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 FAM216BQ8N7L0 139 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 PPDPFLQ8WWR9 84 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 ZNF714Q96N38 554 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 NPCDR1Q9BY65 106 aa3.69□□□□□ -1.82
TRAPPC11-208ENST00000511955 WNK2Q9Y3S1 2297 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 ARHGAP32A7KAX9 2087 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 FN1P02751 2386 aaKnown RBP3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 PRM2P04554 102 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 ZNF688P0C7X2 276 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 DSCR9P59020 149 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 KISS1Q15726 138 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 SCXQ7RTU7 201 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 VSIG2Q96IQ7 327 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 SND1-IT1Q9HBX3 110 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 LINC00588Q9Y4M8 146 aa3.68□□□□□ -1.82
TRAPPC11-208ENST00000511955 A0A096LNT2 108 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 LTAP01374 205 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 HBDP02042 147 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 TMEM252Q8N6L7 170 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 C11orf1Q9H5F2 150 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 KIAA2026Q5HYC2 2103 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.67□□□□□ -1.822e-9■■■■□ 20
TRAPPC11-208ENST00000511955 CR1P17927 2039 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGHV3OR16-10A0A075B7F0 116 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGKV1-12A0A0C4DH73 117 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 SRRM5B3KS81 715 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGKV1D-12P01611 117 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 APCSP02743 223 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 C17orf58Q2M2W7 97 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 ZNF876PQ49A33 203 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 FP248Q71RG6 208 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 DAND5Q8N907 189 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 SLC25A22Q9H936 323 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 MALRD1Q5VYJ5 2156 aa3.67□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGKV1D-17A0A075B6S4 117 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms