RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 A0A087WTM6 91 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 LINC00862A6NCI5 91 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 A8MWV9 139 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 K7EP13 123 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 ERVFC1-1P60608 527 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 GAGE1Q13065 139 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 GAGE4Q13068 117 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 GAGE5Q13069 117 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 ZNF674Q2M3X9 581 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 LINC01556Q5JQF7 62 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 OR10J3Q5JRS4 329 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 CLLU1Q5K131 121 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 DNLZQ5SXM8 178 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 UFSP1Q6NVU6 142 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 ZFP2Q6ZN57 461 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 TMUB2Q71RG4 321 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 C14orf178Q8N769 122 aaPredicted RBP5.78□□□□□ -1.48
PDPN-209ENST00000510906 ATP6V0E2Q8NHE4 81 aa5.78□□□□□ -1.48
PDPN-209ENST00000510906 MYCBP2O75592 4640 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 TRAV8-6A0A0B4J262 113 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 LINC00694P0DN24 101 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 LELP1Q5T871 98 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 SLC51BQ86UW2 128 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 C10orf126Q8N4M7 172 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 MAPKAPK5-AS1Q8N8E1 139 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 GTSF1LQ9H1H1 148 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 SCRT2Q9NQ03 307 aa5.77□□□□□ -1.49
PDPN-209ENST00000510906 IBA57-AS1B1ANH7 110 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 M0R381 172 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 IGHV3-30P01768 117 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 IGHV3-33P01772 117 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 IGHV3-30-3P0DP02 117 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 IGHV3-30-5P0DP03 117 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 TPT1P13693 172 aaKnown RBP5.76□□□□□ -1.49
PDPN-209ENST00000510906 EIF5AP63241 154 aaKnown RBP5.76□□□□□ -1.49
PDPN-209ENST00000510906 CCL20P78556 96 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 RPL19P84098 196 aaKnown RBP5.76□□□□□ -1.49
PDPN-209ENST00000510906 FAM74A4Q5TZK3 123 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 BAGE2Q86Y30 109 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 NEXN-AS1Q8NBZ9 246 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 Q9HAA7 133 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 MED9Q9NWA0 146 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 PHLDA3Q9Y5J5 127 aa5.76□□□□□ -1.49
PDPN-209ENST00000510906 S100A9P06702 114 aaKnown RBP5.75□□□□□ -1.49
PDPN-209ENST00000510906 RPL36ALQ969Q0 106 aaKnown RBP5.75□□□□□ -1.49
PDPN-209ENST00000510906 SFRP2Q96HF1 295 aa5.75□□□□□ -1.49
PDPN-209ENST00000510906 GNG13Q9P2W3 67 aa5.75□□□□□ -1.49
PDPN-209ENST00000510906 LRCOL1A6NCL2 159 aa5.74□□□□□ -1.49
PDPN-209ENST00000510906 TWIST1Q15672 202 aa5.74□□□□□ -1.49
PDPN-209ENST00000510906 PRR27Q6MZM9 219 aa5.74□□□□□ -1.49
PDPN-209ENST00000510906 ZFP82Q8N141 532 aa5.74□□□□□ -1.49
PDPN-209ENST00000510906 OR10AG1Q8NH19 301 aa5.74□□□□□ -1.49
PDPN-209ENST00000510906 DERL1Q9BUN8 251 aa5.74□□□□□ -1.49
PDPN-209ENST00000510906 TRAV1-1A0A0B4J248 108 aa5.73□□□□□ -1.49
PDPN-209ENST00000510906 MUC21A0A0G2JKD1 596 aa5.73□□□□□ -1.49
PDPN-209ENST00000510906 MUC21A0A140T8X8 626 aa5.73□□□□□ -1.49
PDPN-209ENST00000510906 PSCAO43653 123 aa5.73□□□□□ -1.49
PDPN-209ENST00000510906 RPL35P42766 123 aaKnown RBP5.73□□□□□ -1.49
PDPN-209ENST00000510906 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
PDPN-209ENST00000510906 NRACQ8N912 160 aa5.73□□□□□ -1.49
PDPN-209ENST00000510906 C11orf52Q96A22 123 aa5.73□□□□□ -1.49
PDPN-209ENST00000510906 MANBALQ9NQG1 85 aa5.73□□□□□ -1.49
PDPN-209ENST00000510906 MUC2Q02817 5179 aa5.72□□□□□ -1.49
PDPN-209ENST00000510906 CXCL1P09341 107 aa5.72□□□□□ -1.49
PDPN-209ENST00000510906 SULT1A2P50226 295 aa5.72□□□□□ -1.49
PDPN-209ENST00000510906 RAB5CP51148 216 aa5.72□□□□□ -1.49
PDPN-209ENST00000510906 SSTP61278 116 aa5.72□□□□□ -1.49
PDPN-209ENST00000510906 EIF5AL1Q6IS14 154 aaKnown RBP5.72□□□□□ -1.49
PDPN-209ENST00000510906 DAZ4Q86SG3 579 aaKnown RBP5.72□□□□□ -1.49
PDPN-209ENST00000510906 DAZ3Q9NR90 486 aaKnown RBP5.72□□□□□ -1.49
PDPN-209ENST00000510906 PAM16Q9Y3D7 125 aa5.72□□□□□ -1.49
PDPN-209ENST00000510906 FAT1Q14517 4588 aa5.72□□□□□ -1.49
PDPN-209ENST00000510906 A0A087WWC5 75 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 TRBV10-1A0A0K0K1A3 114 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 RAB19A4D1S5 217 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 SNAI2O43623 268 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 IGLV2-8P01709 118 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 XGP55808 180 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 WFDC2Q14508 124 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 LAGE3Q14657 143 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 ZNF56Q15929 161 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 CENPWQ5EE01 88 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 COMMD7Q86VX2 200 aa5.71□□□□□ -1.5
PDPN-209ENST00000510906 TRBV7-3A0A075B6L6 115 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 RBFOX3A6NFN3 312 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 TEX46H3BTG2 121 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 OR5AL1P0C617 328 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 GZMBP10144 247 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 AMTP48728 403 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 RAB4BP61018 213 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 UBE2D3P61077 147 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 UBE2D2P62837 147 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 RPL36AP83881 106 aaKnown RBP5.7□□□□□ -1.5
PDPN-209ENST00000510906 SPANXN1Q5VSR9 72 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 ALKAL2Q6UX46 152 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 NIT1Q86X76 327 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 Q8N814 137 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 DNAJC30Q96LL9 226 aa5.7□□□□□ -1.5
PDPN-209ENST00000510906 TRBV20OR9-2A0A075B6H5 130 aa5.69□□□□□ -1.5
PDPN-209ENST00000510906 IGLV5-52A0A0A0MRZ9 124 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms