RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ERCC8Q13216 396 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 MRPL51Q4U2R6 128 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 FAM19A2Q8N3H0 131 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 RNF182Q8N6D2 247 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 Q8TAT8 98 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 DCANP1Q8TF63 244 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 MAP1LC3AQ9H492 121 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 LINC00527Q9UJ94 153 aa4.84□□□□□ -1.63
TRAPPC11-206ENST00000509857 COL12A1Q99715 3063 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGHV3OR16-8A0A075B7F1 116 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 TMEM213A2RRL7 107 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 A8MTW9 85 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 D6R8Y8 96 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 M0R143 59 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 ZNF207O43670 478 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGHV3-11P01762 117 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 HBDP02042 147 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 G0S2P27469 103 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 RPL32P62910 135 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 CXCL6P80162 114 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 LGALS9BQ3B8N2 356 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 TDRG1Q3Y452 100 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 LINC01545Q5VT33 79 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 LGALS9CQ6DKI2 356 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 EBLN2Q6P2I7 272 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 AMN1Q8IY45 258 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 C4orf3Q8WVX3 66 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 NRGNQ92686 78 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 RNF185Q96GF1 192 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 FOXC2Q99958 501 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 PRO1933Q9H354 126 aa4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 MRPS16Q9Y3D3 137 aaKnown RBP4.83□□□□□ -1.64
TRAPPC11-206ENST00000509857 UBR5O95071 2799 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 ZFYVE26Q68DK2 2539 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGHV3-66A0A0C4DH42 116 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 HSBP1L1C9JCN9 74 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 J3QKU1 62 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGLC3P0DOY3 106 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 ASIPP42127 132 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 SPATA45Q537H7 98 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 FOXI2Q6ZQN5 318 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 PMCHL2Q9BQD1 86 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 C20orf78Q9BR46 151 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 TPPP3Q9BW30 176 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 SIGLEC8Q9NYZ4 499 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 TACC2O95359 2948 aa4.82□□□□□ -1.64
TRAPPC11-206ENST00000509857 FLNCQ14315 2725 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGHV3OR16-13A0A075B7E8 117 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 TMSB15BA0A087X1C1 80 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGHV3-74A0A0B4J1X5 117 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 TRAV25A0A0B4J276 109 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 A0A0J9YX75 114 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 OR4C46A6NHA9 309 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 LY6G6DO95868 133 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 S100A4P26447 101 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 FCER1GP30273 86 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 SPANXN1Q5VSR9 72 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 ADAMTSL5Q6ZMM2 481 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 ZNF705AQ6ZN79 300 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 Q8N8P6 123 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 OR1N2Q8NGR9 330 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 AP1S3Q96PC3 154 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 DPH3P1Q9H4G8 78 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 EPG5Q9HCE0 2579 aa4.81□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGLV2-18A0A075B6J9 118 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGHV3-49A0A0A0MS15 119 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 LINC01619G3V211 115 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 TCAPO15273 167 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 CD5LO43866 347 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 ATP5LO75964 103 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 NPYP01303 97 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 IFI27P40305 119 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 FAM159AQ6UWV7 190 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 OR2K2Q8NGT1 345 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 PTH2Q96A98 100 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 C16orf95Q9H693 158 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 PHLDA3Q9Y5J5 127 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 DOPEY2Q9Y3R5 2298 aa4.8□□□□□ -1.64
TRAPPC11-206ENST00000509857 A0A096LNJ9 63 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 C7orf71A4D174 169 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 DLEU1O43261 78 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 HLA-DRB4P13762 266 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 CDKN1BP46527 198 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 CMC4P56277 68 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 KRTAP12-2P59991 146 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 ORMDL2Q53FV1 153 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 C2orf66Q6UXQ4 117 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 IFI27L1Q96BM0 104 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 C9orf85Q96MD7 179 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 LINC00467Q9BRT7 94 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 EDA2RQ9HAV5 297 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 ZNF256Q9Y2P7 627 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 HLA-DRB4X5D2U9 266 aa4.79□□□□□ -1.64
TRAPPC11-206ENST00000509857 H3BVH4 76 aa4.78□□□□□ -1.64
TRAPPC11-206ENST00000509857 RNASE3P12724 160 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-206ENST00000509857 IGLL1P15814 213 aa4.78□□□□□ -1.64
TRAPPC11-206ENST00000509857 HNRNPA3P51991 378 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-206ENST00000509857 SYNJ2BPP57105 145 aa4.78□□□□□ -1.64
TRAPPC11-206ENST00000509857 LAGE3Q14657 143 aa4.78□□□□□ -1.64
TRAPPC11-206ENST00000509857 COL5A1-AS1Q5SY13 56 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms