RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ODF1Q14990 250 aa10.14□□□□□ -0.79
RAB40C-202ENST00000509637 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
RAB40C-202ENST00000509637 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
RAB40C-202ENST00000509637 VAX2Q9UIW0 290 aa10.14□□□□□ -0.79
RAB40C-202ENST00000509637 TNXBP22105 4242 aa10.13□□□□□ -0.79
RAB40C-202ENST00000509637 PAGE4O60829 102 aa10.13□□□□□ -0.79
RAB40C-202ENST00000509637 SSTP61278 116 aa10.13□□□□□ -0.79
RAB40C-202ENST00000509637 UBE2G1P62253 170 aa10.13□□□□□ -0.79
RAB40C-202ENST00000509637 CIRBPQ14011 172 aaKnown RBP10.13□□□□□ -0.79
RAB40C-202ENST00000509637 ZNF56Q15929 161 aa10.13□□□□□ -0.79
RAB40C-202ENST00000509637 DGAT2L7PQ6IED9 249 aa10.13□□□□□ -0.79
RAB40C-202ENST00000509637 LINC00269Q8N2A0 174 aa10.13□□□□□ -0.79
RAB40C-202ENST00000509637 NKX6-2Q9C056 277 aaPredicted RBP10.13□□□□□ -0.79
RAB40C-202ENST00000509637 BORCS7-ASMTA0A0B4J1R7 106 aa10.12□□□□□ -0.79
RAB40C-202ENST00000509637 CRPP02741 224 aa10.12□□□□□ -0.79
RAB40C-202ENST00000509637 CHTF8P0CG12 524 aa10.12□□□□□ -0.79
RAB40C-202ENST00000509637 MIAQ16674 131 aa10.12□□□□□ -0.79
RAB40C-202ENST00000509637 AKR1C8PQ5T2L2 129 aa10.12□□□□□ -0.79
RAB40C-202ENST00000509637 CST9LP1Q5W188 147 aa10.12□□□□□ -0.79
RAB40C-202ENST00000509637 ZNF471Q9BX82 626 aaPredicted RBP10.12□□□□□ -0.79
RAB40C-202ENST00000509637 IGLV10-54A0A075B6I4 117 aa10.11□□□□□ -0.79
RAB40C-202ENST00000509637 SCO2A0A1W2PP80 73 aa10.11□□□□□ -0.79
RAB40C-202ENST00000509637 AKR1C3P42330 323 aa10.11□□□□□ -0.79
RAB40C-202ENST00000509637 KCNIP4Q6PIL6 250 aa10.11□□□□□ -0.79
RAB40C-202ENST00000509637 Q6ZNX1 250 aa10.11□□□□□ -0.79
RAB40C-202ENST00000509637 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
RAB40C-202ENST00000509637 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
RAB40C-202ENST00000509637 IGLV4-60A0A075B6I1 120 aa10.1□□□□□ -0.79
RAB40C-202ENST00000509637 CXCL1P09341 107 aa10.09□□□□□ -0.79
RAB40C-202ENST00000509637 OR5AL1P0C617 328 aa10.09□□□□□ -0.79
RAB40C-202ENST00000509637 DERL1Q9BUN8 251 aa10.09□□□□□ -0.79
RAB40C-202ENST00000509637 A0A1B0GV50 99 aa10.08□□□□□ -0.8
RAB40C-202ENST00000509637 F5H697 171 aa10.08□□□□□ -0.8
RAB40C-202ENST00000509637 SMLR1H3BR10 107 aa10.08□□□□□ -0.8
RAB40C-202ENST00000509637 M0QY20 66 aa10.08□□□□□ -0.8
RAB40C-202ENST00000509637 GZMBP10144 247 aa10.08□□□□□ -0.8
RAB40C-202ENST00000509637 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
RAB40C-202ENST00000509637 BAGE2Q86Y30 109 aa10.08□□□□□ -0.8
RAB40C-202ENST00000509637 A0A087WYN8 130 aa10.07□□□□□ -0.8
RAB40C-202ENST00000509637 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
RAB40C-202ENST00000509637 MBD3L1Q8WWY6 194 aa10.07□□□□□ -0.8
RAB40C-202ENST00000509637 LRP2P98164 4655 aa10.07□□□□□ -0.8
RAB40C-202ENST00000509637 REG3AQ06141 175 aa10.06□□□□□ -0.8
RAB40C-202ENST00000509637 Q6ZRU5 148 aa10.06□□□□□ -0.8
RAB40C-202ENST00000509637 ARPC5O15511 151 aa10.05□□□□□ -0.8
RAB40C-202ENST00000509637 RAB5CP51148 216 aa10.05□□□□□ -0.8
RAB40C-202ENST00000509637 SPANXN1Q5VSR9 72 aa10.05□□□□□ -0.8
RAB40C-202ENST00000509637 STOML3Q8TAV4 291 aa10.05□□□□□ -0.8
RAB40C-202ENST00000509637 TCEAL7Q9BRU2 100 aa10.05□□□□□ -0.8
RAB40C-202ENST00000509637 hCG_2014768A0A024R1R8 64 aa10.04□□□□□ -0.8
RAB40C-202ENST00000509637 TRBV25-1A0A075B6N4 114 aa10.04□□□□□ -0.8
RAB40C-202ENST00000509637 IGLC6P0CF74 106 aa10.04□□□□□ -0.8
RAB40C-202ENST00000509637 CCL20P78556 96 aa10.04□□□□□ -0.8
RAB40C-202ENST00000509637 SUMO4Q6EEV6 95 aa10.04□□□□□ -0.8
RAB40C-202ENST00000509637 TMUB2Q71RG4 321 aa10.04□□□□□ -0.8
RAB40C-202ENST00000509637 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
RAB40C-202ENST00000509637 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
RAB40C-202ENST00000509637 CLRN3Q8NCR9 226 aa10.03□□□□□ -0.8
RAB40C-202ENST00000509637 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
RAB40C-202ENST00000509637 IGHV1-24A0A0C4DH33 117 aa10.02□□□□□ -0.81
RAB40C-202ENST00000509637 HMSDA8MTL9 139 aa10.02□□□□□ -0.81
RAB40C-202ENST00000509637 NKX2-5P52952 324 aaPredicted RBP10.02□□□□□ -0.81
RAB40C-202ENST00000509637 C15orf56Q8N910 161 aa10.02□□□□□ -0.81
RAB40C-202ENST00000509637 FAM213BQ8TBF2 198 aa10.02□□□□□ -0.81
RAB40C-202ENST00000509637 PHOX2AO14813 284 aa10.01□□□□□ -0.81
RAB40C-202ENST00000509637 S100A9P06702 114 aaKnown RBP10.01□□□□□ -0.81
RAB40C-202ENST00000509637 PKIAP61925 76 aa10.01□□□□□ -0.81
RAB40C-202ENST00000509637 TMEM97Q5BJF2 176 aa10.01□□□□□ -0.81
RAB40C-202ENST00000509637 AKAP14Q86UN6 197 aa10.01□□□□□ -0.81
RAB40C-202ENST00000509637 TCTE3Q8IZS6 198 aa10.01□□□□□ -0.81
RAB40C-202ENST00000509637 PLAC8Q9NZF1 115 aa10.01□□□□□ -0.81
RAB40C-202ENST00000509637 A0A0D9SG52 128 aa10□□□□□ -0.81
RAB40C-202ENST00000509637 A0A1B0GUV1 79 aa10□□□□□ -0.81
RAB40C-202ENST00000509637 C19orf71A6NCJ1 209 aa10□□□□□ -0.81
RAB40C-202ENST00000509637 MGPP08493 103 aa10□□□□□ -0.81
RAB40C-202ENST00000509637 RPL35P42766 123 aaKnown RBP10□□□□□ -0.81
RAB40C-202ENST00000509637 ZNF345Q14585 488 aa10□□□□□ -0.81
RAB40C-202ENST00000509637 KCNRGQ8N5I3 272 aa10□□□□□ -0.81
RAB40C-202ENST00000509637 PRSS3P2Q8NHM4 247 aa10□□□□□ -0.81
RAB40C-202ENST00000509637 AP1S3Q96PC3 154 aa9.99□□□□□ -0.81
RAB40C-202ENST00000509637 IGHV3-64A0A075B6Q5 118 aa9.98□□□□□ -0.81
RAB40C-202ENST00000509637 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
RAB40C-202ENST00000509637 RAB19A4D1S5 217 aa9.98□□□□□ -0.81
RAB40C-202ENST00000509637 P01737 135 aa9.98□□□□□ -0.81
RAB40C-202ENST00000509637 C11orf52Q96A22 123 aa9.98□□□□□ -0.81
RAB40C-202ENST00000509637 TMEM243Q9BU79 118 aa9.98□□□□□ -0.81
RAB40C-202ENST00000509637 RNF213Q63HN8 5207 aa9.98□□□□□ -0.81
RAB40C-202ENST00000509637 A0A1B0GVG6 124 aa9.97□□□□□ -0.81
RAB40C-202ENST00000509637 COX6A2Q02221 97 aa9.97□□□□□ -0.81
RAB40C-202ENST00000509637 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
RAB40C-202ENST00000509637 RNF185Q96GF1 192 aa9.97□□□□□ -0.81
RAB40C-202ENST00000509637 TPPP3Q9BW30 176 aa9.97□□□□□ -0.81
RAB40C-202ENST00000509637 TRBV20OR9-2A0A075B6H5 130 aa9.96□□□□□ -0.82
RAB40C-202ENST00000509637 KANTRA0A1W2PQU2 76 aa9.96□□□□□ -0.82
RAB40C-202ENST00000509637 GAGE12HA6NDE8 117 aa9.96□□□□□ -0.82
RAB40C-202ENST00000509637 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
RAB40C-202ENST00000509637 HIGD2BQ4VC39 106 aa9.96□□□□□ -0.82
RAB40C-202ENST00000509637 RASL11AQ6T310 242 aa9.96□□□□□ -0.82
RAB40C-202ENST00000509637 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.96□□□□□ -0.82
RAB40C-202ENST00000509637 OR2D3Q8NGH3 330 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms