RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 HAMPP81172 84 aa11.82□□□□□ -0.52
TPM3-220ENST00000509601 UBE2WQ96B02 151 aa11.82□□□□□ -0.52
TPM3-220ENST00000509601 DAZAP1Q96EP5 407 aaKnown RBP11.82□□□□□ -0.52
TPM3-220ENST00000509601 SMIM12Q96EX1 92 aa11.82□□□□□ -0.52
TPM3-220ENST00000509601 TMEM70Q9BUB7 260 aa11.82□□□□□ -0.52
TPM3-220ENST00000509601 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
TPM3-220ENST00000509601 GNG4P50150 75 aa11.81□□□□□ -0.52
TPM3-220ENST00000509601 RPS20P60866 119 aaKnown RBP11.81□□□□□ -0.52
TPM3-220ENST00000509601 ATRAIDQ6UW56 229 aa11.81□□□□□ -0.52
TPM3-220ENST00000509601 NTM-AS1Q6ZSK4 140 aa11.81□□□□□ -0.52
TPM3-220ENST00000509601 VAX2Q9UIW0 290 aa11.81□□□□□ -0.52
TPM3-220ENST00000509601 IGKV2D-24A0A075B6R9 120 aa11.8□□□□□ -0.52
TPM3-220ENST00000509601 IFNA1P01562 189 aa11.8□□□□□ -0.52
TPM3-220ENST00000509601 ELOBQ15370 118 aa11.8□□□□□ -0.52
TPM3-220ENST00000509601 Q5VSD8 79 aa11.8□□□□□ -0.52
TPM3-220ENST00000509601 C9orf62Q8N4C0 152 aa11.8□□□□□ -0.52
TPM3-220ENST00000509601 FER1L6-AS1Q8NA97 138 aa11.8□□□□□ -0.52
TPM3-220ENST00000509601 RMI2Q96E14 147 aa11.8□□□□□ -0.52
TPM3-220ENST00000509601 MYCBP2O75592 4640 aa11.79□□□□□ -0.52
TPM3-220ENST00000509601 M0QY20 66 aa11.79□□□□□ -0.52
TPM3-220ENST00000509601 SMIM17P0DL12 118 aa11.79□□□□□ -0.52
TPM3-220ENST00000509601 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
TPM3-220ENST00000509601 NUDT10Q8NFP7 164 aa11.79□□□□□ -0.52
TPM3-220ENST00000509601 NUDT11Q96G61 164 aa11.79□□□□□ -0.52
TPM3-220ENST00000509601 AP1S3Q96PC3 154 aa11.79□□□□□ -0.52
TPM3-220ENST00000509601 TPPP3Q9BW30 176 aa11.79□□□□□ -0.52
TPM3-220ENST00000509601 SRRM2Q9UQ35 2752 aaKnown RBP11.78□□□□□ -0.52
TPM3-220ENST00000509601 P01737 135 aa11.78□□□□□ -0.52
TPM3-220ENST00000509601 CACNG7P62955 275 aa11.78□□□□□ -0.52
TPM3-220ENST00000509601 MPV17L2Q567V2 206 aa11.78□□□□□ -0.52
TPM3-220ENST00000509601 FRZBQ92765 325 aa11.78□□□□□ -0.52
TPM3-220ENST00000509601 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.77□□□□□ -0.53
TPM3-220ENST00000509601 INAFM2P0DMQ5 153 aa11.77□□□□□ -0.53
TPM3-220ENST00000509601 Q0VG73 95 aa11.77□□□□□ -0.53
TPM3-220ENST00000509601 KCNIP4Q6PIL6 250 aa11.77□□□□□ -0.53
TPM3-220ENST00000509601 LYZL1Q6UWQ5 148 aa11.77□□□□□ -0.53
TPM3-220ENST00000509601 Q8N976 141 aa11.77□□□□□ -0.53
TPM3-220ENST00000509601 OCC1Q8TAD7 63 aa11.77□□□□□ -0.53
TPM3-220ENST00000509601 F2Z2F3 143 aa11.76□□□□□ -0.53
TPM3-220ENST00000509601 SUMO4Q6EEV6 95 aa11.76□□□□□ -0.53
TPM3-220ENST00000509601 C15orf54Q8N8G6 183 aa11.76□□□□□ -0.53
TPM3-220ENST00000509601 BIN3Q9NQY0 253 aa11.76□□□□□ -0.53
TPM3-220ENST00000509601 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
TPM3-220ENST00000509601 NTF3P20783 257 aa11.75□□□□□ -0.53
TPM3-220ENST00000509601 TAGLN2P37802 199 aaKnown RBP11.75□□□□□ -0.53
TPM3-220ENST00000509601 TMEM97Q5BJF2 176 aa11.75□□□□□ -0.53
TPM3-220ENST00000509601 Q6ZSA8 131 aa11.75□□□□□ -0.53
TPM3-220ENST00000509601 AKAP14Q86UN6 197 aa11.75□□□□□ -0.53
TPM3-220ENST00000509601 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.75□□□□□ -0.53
TPM3-220ENST00000509601 CHCHD5Q9BSY4 110 aa11.75□□□□□ -0.53
TPM3-220ENST00000509601 K7EN84 100 aa11.74□□□□□ -0.53
TPM3-220ENST00000509601 MGPP08493 103 aa11.74□□□□□ -0.53
TPM3-220ENST00000509601 LINC01620Q4KN68 170 aa11.74□□□□□ -0.53
TPM3-220ENST00000509601 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
TPM3-220ENST00000509601 hCG_2014768A0A024R1R8 64 aa11.73□□□□□ -0.53
TPM3-220ENST00000509601 ANGP03950 147 aaKnown RBP11.73□□□□□ -0.53
TPM3-220ENST00000509601 FLG2Q5D862 2391 aaPredicted RBP11.73□□□□□ -0.53
TPM3-220ENST00000509601 ALKAL2Q6UX46 152 aa11.73□□□□□ -0.53
TPM3-220ENST00000509601 LYPD6BQ8NI32 183 aa11.73□□□□□ -0.53
TPM3-220ENST00000509601 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
TPM3-220ENST00000509601 FAM229AH3BQW9 127 aa11.72□□□□□ -0.53
TPM3-220ENST00000509601 RBX1P62877 108 aa11.72□□□□□ -0.53
TPM3-220ENST00000509601 GAGE6Q13070 117 aa11.72□□□□□ -0.53
TPM3-220ENST00000509601 IQCJQ1A5X6 159 aa11.72□□□□□ -0.53
TPM3-220ENST00000509601 C1orf43Q9BWL3 253 aa11.72□□□□□ -0.53
TPM3-220ENST00000509601 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 H7C1H1 209 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 TRGC1P0CF51 173 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 NKX2-5P52952 324 aaPredicted RBP11.71□□□□□ -0.53
TPM3-220ENST00000509601 PKIAP61925 76 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 BLOC1S1P78537 153 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 RASL11AQ6T310 242 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 CNFNQ9BYD5 112 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 DPH3P1Q9H4G8 78 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 PRR34Q9NV39 138 aa11.71□□□□□ -0.53
TPM3-220ENST00000509601 CRPP02741 224 aa11.7□□□□□ -0.54
TPM3-220ENST00000509601 CTRLP40313 264 aa11.7□□□□□ -0.54
TPM3-220ENST00000509601 KRTAP26-1Q6PEX3 210 aa11.7□□□□□ -0.54
TPM3-220ENST00000509601 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
TPM3-220ENST00000509601 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
TPM3-220ENST00000509601 IGHV1-24A0A0C4DH33 117 aa11.69□□□□□ -0.54
TPM3-220ENST00000509601 MIAQ16674 131 aa11.69□□□□□ -0.54
TPM3-220ENST00000509601 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
TPM3-220ENST00000509601 GTSF1Q8WW33 167 aa11.69□□□□□ -0.54
TPM3-220ENST00000509601 TMEM250H0YL14 139 aa11.68□□□□□ -0.54
TPM3-220ENST00000509601 TWIST1Q15672 202 aa11.68□□□□□ -0.54
TPM3-220ENST00000509601 DEFB104AQ8WTQ1 72 aa11.67□□□□□ -0.54
TPM3-220ENST00000509601 FOXA3P55318 350 aaPredicted RBP11.66□□□□□ -0.54
TPM3-220ENST00000509601 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
TPM3-220ENST00000509601 C20orf203Q8NBC4 194 aa11.66□□□□□ -0.54
TPM3-220ENST00000509601 PGLYRP4Q96LB8 373 aa11.66□□□□□ -0.54
TPM3-220ENST00000509601 A0A1B0GUV1 79 aa11.65□□□□□ -0.54
TPM3-220ENST00000509601 USP17L23D6RBM5 183 aa11.65□□□□□ -0.54
TPM3-220ENST00000509601 C14orf177Q52M58 125 aa11.65□□□□□ -0.54
TPM3-220ENST00000509601 CLPSL2Q6UWE3 100 aa11.65□□□□□ -0.54
TPM3-220ENST00000509601 FAM231DQ6ZW35 169 aa11.65□□□□□ -0.54
TPM3-220ENST00000509601 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
TPM3-220ENST00000509601 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
TPM3-220ENST00000509601 GATCO43716 136 aaKnown RBP11.64□□□□□ -0.55
TPM3-220ENST00000509601 PRSS1P07477 247 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms