RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ANGP03950 147 aaKnown RBP10.09□□□□□ -0.79
TPM3-219ENST00000509409 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
TPM3-219ENST00000509409 MLST8Q9BVC4 326 aa10.09□□□□□ -0.79
TPM3-219ENST00000509409 HMSDA8MTL9 139 aa10.08□□□□□ -0.8
TPM3-219ENST00000509409 BCL2L11O43521 198 aa10.08□□□□□ -0.8
TPM3-219ENST00000509409 SNAI2O43623 268 aa10.08□□□□□ -0.8
TPM3-219ENST00000509409 C14orf177Q52M58 125 aa10.08□□□□□ -0.8
TPM3-219ENST00000509409 OR5AL1P0C617 328 aa10.07□□□□□ -0.8
TPM3-219ENST00000509409 PKIAP61925 76 aa10.07□□□□□ -0.8
TPM3-219ENST00000509409 ENHOQ6UWT2 76 aa10.07□□□□□ -0.8
TPM3-219ENST00000509409 SCXQ7RTU7 201 aa10.07□□□□□ -0.8
TPM3-219ENST00000509409 SSBP4Q9BWG4 385 aaPredicted RBP10.07□□□□□ -0.8
TPM3-219ENST00000509409 RPL35P42766 123 aaKnown RBP10.06□□□□□ -0.8
TPM3-219ENST00000509409 MPV17L2Q567V2 206 aa10.06□□□□□ -0.8
TPM3-219ENST00000509409 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
TPM3-219ENST00000509409 ATRAIDQ6UW56 229 aa10.06□□□□□ -0.8
TPM3-219ENST00000509409 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
TPM3-219ENST00000509409 DAZAP1Q96EP5 407 aaKnown RBP10.06□□□□□ -0.8
TPM3-219ENST00000509409 DERL1Q9BUN8 251 aa10.06□□□□□ -0.8
TPM3-219ENST00000509409 CHAC1Q9BUX1 264 aa10.06□□□□□ -0.8
TPM3-219ENST00000509409 TPPP3Q9BW30 176 aa10.06□□□□□ -0.8
TPM3-219ENST00000509409 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
TPM3-219ENST00000509409 HLA-DQA1P01909 254 aa10.04□□□□□ -0.8
TPM3-219ENST00000509409 MGPP08493 103 aa10.04□□□□□ -0.8
TPM3-219ENST00000509409 CCL20P78556 96 aa10.04□□□□□ -0.8
TPM3-219ENST00000509409 GAGE6Q13070 117 aa10.04□□□□□ -0.8
TPM3-219ENST00000509409 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
TPM3-219ENST00000509409 MANBALQ9NQG1 85 aa10.04□□□□□ -0.8
TPM3-219ENST00000509409 GZMBP10144 247 aa10.03□□□□□ -0.8
TPM3-219ENST00000509409 NTM-AS1Q6ZSK4 140 aa10.03□□□□□ -0.8
TPM3-219ENST00000509409 CIRBP-AS1Q8TBR5 109 aa10.03□□□□□ -0.8
TPM3-219ENST00000509409 TRBV25-1A0A075B6N4 114 aa10.02□□□□□ -0.81
TPM3-219ENST00000509409 USP17L23D6RBM5 183 aa10.02□□□□□ -0.81
TPM3-219ENST00000509409 TEX46H3BTG2 121 aa10.02□□□□□ -0.81
TPM3-219ENST00000509409 RPS20P60866 119 aaKnown RBP10.02□□□□□ -0.81
TPM3-219ENST00000509409 MIAQ16674 131 aa10.02□□□□□ -0.81
TPM3-219ENST00000509409 LCE2AQ5TA79 106 aaPredicted RBP10.02□□□□□ -0.81
TPM3-219ENST00000509409 CLPSL2Q6UWE3 100 aa10.02□□□□□ -0.81
TPM3-219ENST00000509409 FER1L6-AS1Q8NA97 138 aa10.02□□□□□ -0.81
TPM3-219ENST00000509409 OR2D3Q8NGH3 330 aa10.02□□□□□ -0.81
TPM3-219ENST00000509409 KIF25-AS1Q9Y6Z4 181 aa10.02□□□□□ -0.81
TPM3-219ENST00000509409 RBX1P62877 108 aa10.01□□□□□ -0.81
TPM3-219ENST00000509409 CENPWQ5EE01 88 aa10.01□□□□□ -0.81
TPM3-219ENST00000509409 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
TPM3-219ENST00000509409 VAX2Q9UIW0 290 aa10.01□□□□□ -0.81
TPM3-219ENST00000509409 IGHV1-24A0A0C4DH33 117 aa10□□□□□ -0.81
TPM3-219ENST00000509409 RAB19A4D1S5 217 aa10□□□□□ -0.81
TPM3-219ENST00000509409 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
TPM3-219ENST00000509409 H7C1H1 209 aa10□□□□□ -0.81
TPM3-219ENST00000509409 RAB5CP51148 216 aa10□□□□□ -0.81
TPM3-219ENST00000509409 CACNG7P62955 275 aa10□□□□□ -0.81
TPM3-219ENST00000509409 EIF5AL1Q6IS14 154 aaKnown RBP10□□□□□ -0.81
TPM3-219ENST00000509409 C11orf52Q96A22 123 aa10□□□□□ -0.81
TPM3-219ENST00000509409 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
TPM3-219ENST00000509409 XKRY2A2RUG3 117 aa9.99□□□□□ -0.81
TPM3-219ENST00000509409 GNG4P50150 75 aa9.99□□□□□ -0.81
TPM3-219ENST00000509409 M0QY20 66 aa9.98□□□□□ -0.81
TPM3-219ENST00000509409 IGLV2-8P01709 118 aa9.98□□□□□ -0.81
TPM3-219ENST00000509409 P01737 135 aa9.98□□□□□ -0.81
TPM3-219ENST00000509409 PRSS1P07477 247 aa9.98□□□□□ -0.81
TPM3-219ENST00000509409 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
TPM3-219ENST00000509409 NKX2-5P52952 324 aaPredicted RBP9.98□□□□□ -0.81
TPM3-219ENST00000509409 SUMO4Q6EEV6 95 aa9.98□□□□□ -0.81
TPM3-219ENST00000509409 MED9Q9NWA0 146 aa9.98□□□□□ -0.81
TPM3-219ENST00000509409 C19orf71A6NCJ1 209 aa9.97□□□□□ -0.81
TPM3-219ENST00000509409 F2Z2F3 143 aa9.97□□□□□ -0.81
TPM3-219ENST00000509409 IFNA1P01562 189 aa9.97□□□□□ -0.81
TPM3-219ENST00000509409 IQCJQ1A5X6 159 aa9.97□□□□□ -0.81
TPM3-219ENST00000509409 DGAT2L7PQ6IED9 249 aa9.97□□□□□ -0.81
TPM3-219ENST00000509409 PRR34Q9NV39 138 aa9.97□□□□□ -0.81
TPM3-219ENST00000509409 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
TPM3-219ENST00000509409 PDE6DO43924 150 aa9.96□□□□□ -0.82
TPM3-219ENST00000509409 TRGC1P0CF51 173 aa9.96□□□□□ -0.82
TPM3-219ENST00000509409 REG3AQ06141 175 aa9.96□□□□□ -0.82
TPM3-219ENST00000509409 RASL11AQ6T310 242 aa9.96□□□□□ -0.82
TPM3-219ENST00000509409 LYZL1Q6UWQ5 148 aa9.96□□□□□ -0.82
TPM3-219ENST00000509409 BIN3Q9NQY0 253 aa9.96□□□□□ -0.82
TPM3-219ENST00000509409 SULT1A2P50226 295 aa9.95□□□□□ -0.82
TPM3-219ENST00000509409 MEF2BQ02080 365 aaPredicted RBP9.95□□□□□ -0.82
TPM3-219ENST00000509409 SMIM12Q96EX1 92 aa9.95□□□□□ -0.82
TPM3-219ENST00000509409 TMEM243Q9BU79 118 aa9.95□□□□□ -0.82
TPM3-219ENST00000509409 UBE2L6O14933 153 aa9.94□□□□□ -0.82
TPM3-219ENST00000509409 NTF3P20783 257 aa9.94□□□□□ -0.82
TPM3-219ENST00000509409 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
TPM3-219ENST00000509409 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
TPM3-219ENST00000509409 CLRN3Q8NCR9 226 aa9.94□□□□□ -0.82
TPM3-219ENST00000509409 DPH3P1Q9H4G8 78 aa9.94□□□□□ -0.82
TPM3-219ENST00000509409 NIT2Q9NQR4 276 aa9.94□□□□□ -0.82
TPM3-219ENST00000509409 TWIST1Q15672 202 aa9.93□□□□□ -0.82
TPM3-219ENST00000509409 KRTAP26-1Q6PEX3 210 aa9.93□□□□□ -0.82
TPM3-219ENST00000509409 C20orf203Q8NBC4 194 aa9.93□□□□□ -0.82
TPM3-219ENST00000509409 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
TPM3-219ENST00000509409 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
TPM3-219ENST00000509409 TRAV8-4A0A0B4J246 113 aa9.92□□□□□ -0.82
TPM3-219ENST00000509409 hDV102S1A0JD36 115 aa9.92□□□□□ -0.82
TPM3-219ENST00000509409 OXTP01178 125 aa9.92□□□□□ -0.82
TPM3-219ENST00000509409 BCL2P10415 239 aa9.92□□□□□ -0.82
TPM3-219ENST00000509409 KRTAP10-4P60372 401 aaPredicted RBP9.92□□□□□ -0.82
TPM3-219ENST00000509409 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
TPM3-219ENST00000509409 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms