RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GCSHP23434 173 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 FUSP35637 526 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBE3D-207ENST00000509102 PKIAP61925 76 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 TMEM97Q5BJF2 176 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 Q8N3U1 123 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 NEXN-AS1Q8NBZ9 246 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 KRTAP17-1Q9BYP8 105 aa12.47□□□□□ -0.41
UBE3D-207ENST00000509102 LRCOL1A6NCL2 159 aa12.46□□□□□ -0.41
UBE3D-207ENST00000509102 TMEM262E9PQX1 116 aa12.46□□□□□ -0.41
UBE3D-207ENST00000509102 IGLC6P0CF74 106 aa12.46□□□□□ -0.41
UBE3D-207ENST00000509102 Q8N814 137 aa12.46□□□□□ -0.41
UBE3D-207ENST00000509102 HSPG2P98160 4391 aa12.46□□□□□ -0.42
UBE3D-207ENST00000509102 TRBV20OR9-2A0A075B6H5 130 aa12.45□□□□□ -0.42
UBE3D-207ENST00000509102 TRBV6-8A0A0A6YYG3 113 aa12.45□□□□□ -0.42
UBE3D-207ENST00000509102 MGPP08493 103 aa12.45□□□□□ -0.42
UBE3D-207ENST00000509102 TRGC1P0CF51 173 aa12.45□□□□□ -0.42
UBE3D-207ENST00000509102 Q8N1X5 172 aa12.45□□□□□ -0.42
UBE3D-207ENST00000509102 KLK12Q9UKR0 248 aa12.44□□□□□ -0.42
UBE3D-207ENST00000509102 TMEM250H0YL14 139 aa12.43□□□□□ -0.42
UBE3D-207ENST00000509102 Q0VG73 95 aa12.43□□□□□ -0.42
UBE3D-207ENST00000509102 CHCHD5Q9BSY4 110 aa12.43□□□□□ -0.42
UBE3D-207ENST00000509102 KIF25-AS1Q9Y6Z4 181 aa12.43□□□□□ -0.42
UBE3D-207ENST00000509102 CRPP02741 224 aa12.42□□□□□ -0.42
UBE3D-207ENST00000509102 LYZL1Q6UWQ5 148 aa12.42□□□□□ -0.42
UBE3D-207ENST00000509102 NUDT10Q8NFP7 164 aa12.42□□□□□ -0.42
UBE3D-207ENST00000509102 UBE2WQ96B02 151 aa12.42□□□□□ -0.42
UBE3D-207ENST00000509102 NUDT11Q96G61 164 aa12.42□□□□□ -0.42
UBE3D-207ENST00000509102 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
UBE3D-207ENST00000509102 RPP21Q9H633 154 aaKnown RBP12.42□□□□□ -0.42
UBE3D-207ENST00000509102 DNAH5Q8TE73 4624 aa12.42□□□□□ -0.42
UBE3D-207ENST00000509102 IGKV2D-24A0A075B6R9 120 aa12.41□□□□□ -0.42
UBE3D-207ENST00000509102 KRTAP10-1P60331 282 aa12.41□□□□□ -0.42
UBE3D-207ENST00000509102 APOBP04114 4563 aaKnown RBP12.4□□□□□ -0.42
UBE3D-207ENST00000509102 CEBPGP53567 150 aa12.4□□□□□ -0.42
UBE3D-207ENST00000509102 WDR73Q6P4I2 378 aa12.4□□□□□ -0.42
UBE3D-207ENST00000509102 OCC1Q8TAD7 63 aa12.4□□□□□ -0.42
UBE3D-207ENST00000509102 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
UBE3D-207ENST00000509102 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
UBE3D-207ENST00000509102 NTF3P20783 257 aa12.39□□□□□ -0.43
UBE3D-207ENST00000509102 EIF5A2Q9GZV4 153 aaKnown RBP12.39□□□□□ -0.43
UBE3D-207ENST00000509102 RNASE7Q9H1E1 156 aaKnown RBP12.39□□□□□ -0.43
UBE3D-207ENST00000509102 M0QY20 66 aa12.38□□□□□ -0.43
UBE3D-207ENST00000509102 ANGP03950 147 aaKnown RBP12.38□□□□□ -0.43
UBE3D-207ENST00000509102 CTRLP40313 264 aa12.38□□□□□ -0.43
UBE3D-207ENST00000509102 TWIST1Q15672 202 aa12.38□□□□□ -0.43
UBE3D-207ENST00000509102 SUMO4Q6EEV6 95 aa12.38□□□□□ -0.43
UBE3D-207ENST00000509102 SMIM15Q7Z3B0 74 aa12.38□□□□□ -0.43
UBE3D-207ENST00000509102 LYPD6BQ8NI32 183 aa12.38□□□□□ -0.43
UBE3D-207ENST00000509102 C1orf43Q9BWL3 253 aa12.38□□□□□ -0.43
UBE3D-207ENST00000509102 KRTAP4-5Q9BYR2 181 aa12.38□□□□□ -0.43
UBE3D-207ENST00000509102 K7EN84 100 aa12.37□□□□□ -0.43
UBE3D-207ENST00000509102 LECT2O14960 151 aa12.37□□□□□ -0.43
UBE3D-207ENST00000509102 RASL11AQ6T310 242 aa12.37□□□□□ -0.43
UBE3D-207ENST00000509102 C15orf54Q8N8G6 183 aa12.37□□□□□ -0.43
UBE3D-207ENST00000509102 Q8N976 141 aa12.37□□□□□ -0.43
UBE3D-207ENST00000509102 TMEM70Q9BUB7 260 aa12.37□□□□□ -0.43
UBE3D-207ENST00000509102 IGHV1-24A0A0C4DH33 117 aa12.36□□□□□ -0.43
UBE3D-207ENST00000509102 EPM2AB3EWF7 344 aa12.36□□□□□ -0.43
UBE3D-207ENST00000509102 NKX2-5P52952 324 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-207ENST00000509102 MPV17L2Q567V2 206 aa12.36□□□□□ -0.43
UBE3D-207ENST00000509102 BAALCQ8WXS3 180 aa12.36□□□□□ -0.43
UBE3D-207ENST00000509102 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
UBE3D-207ENST00000509102 XGP55808 180 aa12.35□□□□□ -0.43
UBE3D-207ENST00000509102 FRZBQ92765 325 aa12.35□□□□□ -0.43
UBE3D-207ENST00000509102 CNFNQ9BYD5 112 aa12.35□□□□□ -0.43
UBE3D-207ENST00000509102 NIT2Q9NQR4 276 aa12.35□□□□□ -0.43
UBE3D-207ENST00000509102 ABCA13Q86UQ4 5058 aa12.35□□□□□ -0.43
UBE3D-207ENST00000509102 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.34□□□□□ -0.43
UBE3D-207ENST00000509102 A8MWL6 223 aa12.34□□□□□ -0.43
UBE3D-207ENST00000509102 NDUFS6O75380 124 aaKnown RBP12.34□□□□□ -0.43
UBE3D-207ENST00000509102 IQCJQ1A5X6 159 aa12.34□□□□□ -0.43
UBE3D-207ENST00000509102 C14orf177Q52M58 125 aa12.34□□□□□ -0.43
UBE3D-207ENST00000509102 ATRAIDQ6UW56 229 aa12.34□□□□□ -0.43
UBE3D-207ENST00000509102 BORCS7Q96B45 105 aa12.34□□□□□ -0.43
UBE3D-207ENST00000509102 SMIM7Q9BQ49 75 aa12.34□□□□□ -0.43
UBE3D-207ENST00000509102 GAGE6Q13070 117 aa12.33□□□□□ -0.44
UBE3D-207ENST00000509102 WFDC2Q14508 124 aa12.33□□□□□ -0.44
UBE3D-207ENST00000509102 MIAQ16674 131 aa12.33□□□□□ -0.44
UBE3D-207ENST00000509102 NTM-AS1Q6ZSK4 140 aa12.33□□□□□ -0.44
UBE3D-207ENST00000509102 FAM231DQ6ZW35 169 aa12.33□□□□□ -0.44
UBE3D-207ENST00000509102 FAM210AQ96ND0 272 aa12.32□□□□□ -0.44
UBE3D-207ENST00000509102 RBX1P62877 108 aa12.31□□□□□ -0.44
UBE3D-207ENST00000509102 CT83Q5H943 113 aa12.31□□□□□ -0.44
UBE3D-207ENST00000509102 ENHOQ6UWT2 76 aa12.31□□□□□ -0.44
UBE3D-207ENST00000509102 PGLYRP4Q96LB8 373 aa12.31□□□□□ -0.44
UBE3D-207ENST00000509102 TMEM243Q9BU79 118 aa12.31□□□□□ -0.44
UBE3D-207ENST00000509102 A0A1B0GVG6 124 aa12.3□□□□□ -0.44
UBE3D-207ENST00000509102 ZNF727A8MUV8 499 aa12.3□□□□□ -0.44
UBE3D-207ENST00000509102 UBE2L6O14933 153 aa12.3□□□□□ -0.44
UBE3D-207ENST00000509102 COTL1Q14019 142 aa12.3□□□□□ -0.44
UBE3D-207ENST00000509102 TEX261Q6UWH6 196 aa12.3□□□□□ -0.44
UBE3D-207ENST00000509102 GTSF1Q8WW33 167 aa12.3□□□□□ -0.44
UBE3D-207ENST00000509102 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
UBE3D-207ENST00000509102 HLA-DQA1P01909 254 aa12.28□□□□□ -0.44
UBE3D-207ENST00000509102 LCE2AQ5TA79 106 aaPredicted RBP12.28□□□□□ -0.44
UBE3D-207ENST00000509102 LINC01551Q86U37 167 aa12.28□□□□□ -0.44
UBE3D-207ENST00000509102 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
UBE3D-207ENST00000509102 AMTP48728 403 aa12.27□□□□□ -0.45
UBE3D-207ENST00000509102 Q5VSD8 79 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms