RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 BPTFQ12830 3046 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 ERCC6Q03468 1493 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 LRP1BQ9NZR2 4599 aa-0.05□□□□□ -2.42
GYPB-210ENST00000508841 TNRC18O15417 2968 aaPredicted RBP-0.06□□□□□ -2.42
GYPB-210ENST00000508841 TNXBP22105 4242 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 NRXN2Q9P2S2 1712 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 SPRR2EP22531 72 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 SPRR2BP35325 72 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 SPRR2AP35326 72 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 SPANXN1Q5VSR9 72 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 LINC01545Q5VT33 79 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 DOCK11Q5JSL3 2073 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 FAT1Q14517 4588 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 SETD2Q9BYW2 2564 aaPredicted RBP-0.06□□□□□ -2.42
GYPB-210ENST00000508841 F8P00451 2351 aa-0.06□□□□□ -2.42
GYPB-210ENST00000508841 DOPEY1Q5JWR5 2465 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 SPRR2DP22532 72 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 GSKIPQ9P0R6 139 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 NDUFA12Q9UI09 145 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 U3KQA8 63 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 DISP2A7MBM2 1401 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 EP400Q96L91 3159 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 HECTD1Q9ULT8 2610 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 UBR5O95071 2799 aaPredicted RBP-0.07□□□□□ -2.42
GYPB-210ENST00000508841 MYO18BQ8IUG5 2567 aa-0.07□□□□□ -2.42
GYPB-210ENST00000508841 HSPG2P98160 4391 aa-0.08□□□□□ -2.42
GYPB-210ENST00000508841 HIVEP1P15822 2718 aa-0.08□□□□□ -2.42
GYPB-210ENST00000508841 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
GYPB-210ENST00000508841 CELSR3Q9NYQ7 3312 aa-0.08□□□□□ -2.42
GYPB-210ENST00000508841 FASNP49327 2511 aaKnown RBP-0.08□□□□□ -2.42
GYPB-210ENST00000508841 ANKRD11Q6UB99 2663 aaPredicted RBP-0.08□□□□□ -2.42
GYPB-210ENST00000508841 SETXQ7Z333 2677 aaKnown RBP-0.08□□□□□ -2.42
GYPB-210ENST00000508841 COL7A1Q02388 2944 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 ZNF292O60281 2723 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 SSC5DA1L4H1 1573 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 SYNJ1O43426 1573 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 CHD8Q9HCK8 2581 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 J3QR89 54 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 LELP1Q5T871 98 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 Q96NJ1 140 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 NBEAL2Q6ZNJ1 2754 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 LAMB1P07942 1786 aa-0.09□□□□□ -2.42
GYPB-210ENST00000508841 TRANK1O15050 2925 aa-0.1□□□□□ -2.42
GYPB-210ENST00000508841 MGAM2Q2M2H8 2515 aa-0.1□□□□□ -2.42
GYPB-210ENST00000508841 KMT2AQ03164 3969 aa-0.1□□□□□ -2.42
GYPB-210ENST00000508841 CELSR1Q9NYQ6 3014 aa-0.1□□□□□ -2.42
GYPB-210ENST00000508841 DNAH1Q9P2D7 4330 aa-0.1□□□□□ -2.43
GYPB-210ENST00000508841 PDZD2O15018 2839 aa-0.1□□□□□ -2.43
GYPB-210ENST00000508841 NCR2O95944 276 aa-0.1□□□□□ -2.43
GYPB-210ENST00000508841 IGLC6P0CF74 106 aa-0.1□□□□□ -2.43
GYPB-210ENST00000508841 ACYP2P14621 99 aa-0.1□□□□□ -2.43
GYPB-210ENST00000508841 ASIPP42127 132 aa-0.1□□□□□ -2.43
GYPB-210ENST00000508841 CCDC168Q8NDH2 2452 aa-0.11□□□□□ -2.43
GYPB-210ENST00000508841 ITPR3Q14573 2671 aa-0.11□□□□□ -2.43
GYPB-210ENST00000508841 PCNX1Q96RV3 2341 aa-0.11□□□□□ -2.43
GYPB-210ENST00000508841 HIST1H1AQ02539 215 aaPredicted RBP-0.11□□□□□ -2.43
GYPB-210ENST00000508841 SRCAPQ6ZRS2 3230 aa-0.11□□□□□ -2.43
GYPB-210ENST00000508841 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
GYPB-210ENST00000508841 ITPR1Q14643 2758 aa-0.11□□□□□ -2.43
GYPB-210ENST00000508841 COL14A1Q05707 1796 aaKnown RBP-0.11□□□□□ -2.43
GYPB-210ENST00000508841 ANK2Q01484 3957 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 WNK2Q9Y3S1 2297 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 FAM186AA6NE01 2351 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 MYH6P13533 1939 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 TMEM14DPA8MWL7 114 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 KALRNO60229 2985 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 TSPAN19P0C672 248 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 INSL4Q14641 139 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 Q5VSD8 79 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 Q6ZRX8 168 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 MXRA5Q9NR99 2828 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 MYCBP2O75592 4640 aa-0.12□□□□□ -2.43
GYPB-210ENST00000508841 MYO15AQ9UKN7 3530 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 LYSTQ99698 3801 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 WDFY4Q6ZS81 3184 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 SRRM2Q9UQ35 2752 aaKnown RBP-0.13□□□□□ -2.43
GYPB-210ENST00000508841 AHCTF1Q8WYP5 2266 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 PKD1P98161 4303 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 CKS1BP61024 79 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 SPRR2FQ96RM1 72 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 RPRMQ9NS64 109 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 FLNCQ14315 2725 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 GVINP1Q7Z2Y8 2422 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 SPG11Q96JI7 2443 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 BOD1L1Q8NFC6 3051 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 C2CD3Q4AC94 2353 aa-0.13□□□□□ -2.43
GYPB-210ENST00000508841 LAMA2P24043 3122 aaKnown RBP-0.13□□□□□ -2.43
GYPB-210ENST00000508841 DYNC1H1Q14204 4646 aaKnown RBP-0.14□□□□□ -2.43
GYPB-210ENST00000508841 UTP20O75691 2785 aaKnown RBP-0.14□□□□□ -2.43
GYPB-210ENST00000508841 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
GYPB-210ENST00000508841 LAMA5O15230 3695 aa-0.14□□□□□ -2.43
GYPB-210ENST00000508841 ZFHX4Q86UP3 3567 aa-0.14□□□□□ -2.43
GYPB-210ENST00000508841 PIRTP0C851 137 aa-0.14□□□□□ -2.43
GYPB-210ENST00000508841 C9orf116Q5BN46 136 aaPredicted RBP-0.14□□□□□ -2.43
GYPB-210ENST00000508841 CTAGE3PQ8IX95 158 aa-0.14□□□□□ -2.43
GYPB-210ENST00000508841 BATF3Q9NR55 127 aa-0.14□□□□□ -2.43
GYPB-210ENST00000508841 ATRQ13535 2644 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms