RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 MEGF8Q7Z7M0 2845 aa0.33□□□□□ -2.36
COL4A3BP-205ENST00000508692 IFT140Q96RY7 1462 aa0.33□□□□□ -2.36
COL4A3BP-205ENST00000508692 PHIPQ8WWQ0 1821 aa0.33□□□□□ -2.36
COL4A3BP-205ENST00000508692 TTC28Q96AY4 2481 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 LRRC37A3O60309 1634 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 MED13LQ71F56 2210 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 TRGV1A0A0A0MS02 117 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 HMGN1P05114 100 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 SMIM6P0DI80 62 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 SELENOWP63302 87 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 PDCD10Q9BUL8 212 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 AKAP11Q9UKA4 1901 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 BICRAQ9NZM4 1560 aa0.32□□□□□ -2.36
COL4A3BP-205ENST00000508692 FRAS1Q86XX4 4008 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 CACNA1HO95180 2353 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 CLPSL1A2RUU4 121 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 Q5VV11 94 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 ARL11Q969Q4 196 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 TSC22D3Q99576 134 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 WFDC6Q9BQY6 131 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 SEC11CQ9BY50 192 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 F5P12259 2224 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 NAV2Q8IVL1 2488 aa0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 MUC22E2RYF6 1773 aaPredicted RBP0.31□□□□□ -2.36
COL4A3BP-205ENST00000508692 PXDNQ92626 1479 aa0.3□□□□□ -2.36
COL4A3BP-205ENST00000508692 TPRP12270 2363 aaKnown RBP0.3□□□□□ -2.36
COL4A3BP-205ENST00000508692 S100A7L2Q5SY68 101 aa0.3□□□□□ -2.36
COL4A3BP-205ENST00000508692 C12orf73Q69YU5 71 aa0.3□□□□□ -2.36
COL4A3BP-205ENST00000508692 CFTRP13569 1480 aa0.29□□□□□ -2.36
COL4A3BP-205ENST00000508692 SPINK1P00995 79 aa0.29□□□□□ -2.36
COL4A3BP-205ENST00000508692 Q5BKY6 102 aa0.29□□□□□ -2.36
COL4A3BP-205ENST00000508692 SNRNP25Q9BV90 132 aaKnown RBP0.29□□□□□ -2.36
COL4A3BP-205ENST00000508692 LINC00470Q9BZP3 86 aa0.29□□□□□ -2.36
COL4A3BP-205ENST00000508692 LINC00312Q9Y6C7 94 aa0.29□□□□□ -2.36
COL4A3BP-205ENST00000508692 MYO7AQ13402 2215 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 TRAV1-2A0A0B4J238 106 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 FAM25AB3EWG3 89 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 FAM25CB3EWG5 89 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 FAM25GB3EWG6 89 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 NDUFA2O43678 99 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 BAGE3Q86Y29 109 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 FAM213BQ8TBF2 198 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 RERGLQ9H628 205 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 MYH6P13533 1939 aa0.28□□□□□ -2.36
COL4A3BP-205ENST00000508692 CASKIN1Q8WXD9 1431 aa0.28□□□□□ -2.37
COL4A3BP-205ENST00000508692 PIEZO1Q92508 2521 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 PIN1P1O15428 100 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 SIX6O95475 246 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 UBE2DNLQ8IWF7 75 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 C1orf54Q8WWF1 131 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 FAM107BQ9H098 131 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 AGPAT4-IT1Q9H0P7 198 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 GOLGA3Q08378 1498 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 ABCA12Q86UK0 2595 aa0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 SIPA1L3O60292 1781 aaPredicted RBP0.27□□□□□ -2.37
COL4A3BP-205ENST00000508692 SPAARA0A1B0GVQ0 90 aa0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 HIST1H1DP16402 221 aaKnown RBP0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 Q6AWC8 147 aa0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 AQP10Q96PS8 301 aa0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 NAA60Q9H7X0 242 aa0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 SERP1Q9Y6X1 66 aa0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 NAIPQ13075 1403 aa0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 PARP14Q460N5 1801 aa0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 CADP27708 2225 aa0.26□□□□□ -2.37
COL4A3BP-205ENST00000508692 TRAV13-2A0A0B4J235 113 aa0.25□□□□□ -2.37
COL4A3BP-205ENST00000508692 G3V318 75 aa0.24□□□□□ -2.37
COL4A3BP-205ENST00000508692 K7EP13 123 aa0.24□□□□□ -2.37
COL4A3BP-205ENST00000508692 GNG7O60262 68 aa0.24□□□□□ -2.37
COL4A3BP-205ENST00000508692 BTG2P78543 158 aa0.24□□□□□ -2.37
COL4A3BP-205ENST00000508692 ZMYM4Q5VZL5 1548 aa0.23□□□□□ -2.37
COL4A3BP-205ENST00000508692 ZNF609O15014 1411 aa0.23□□□□□ -2.37
COL4A3BP-205ENST00000508692 HCG22E2RYF7 251 aa0.23□□□□□ -2.37
COL4A3BP-205ENST00000508692 CCL18P55774 89 aa0.23□□□□□ -2.37
COL4A3BP-205ENST00000508692 R4GMQ9 66 aa0.23□□□□□ -2.37
COL4A3BP-205ENST00000508692 NWD2Q9ULI1 1742 aa0.23□□□□□ -2.37
COL4A3BP-205ENST00000508692 PPP1R17O96001 155 aa0.22□□□□□ -2.37
COL4A3BP-205ENST00000508692 SPINK8P0C7L1 97 aa0.22□□□□□ -2.37
COL4A3BP-205ENST00000508692 FGF7P21781 194 aa0.22□□□□□ -2.37
COL4A3BP-205ENST00000508692 MEIG1Q5JSS6 88 aa0.22□□□□□ -2.37
COL4A3BP-205ENST00000508692 Q8N8P6 123 aa0.22□□□□□ -2.37
COL4A3BP-205ENST00000508692 LENEPQ9Y5L5 61 aa0.22□□□□□ -2.37
COL4A3BP-205ENST00000508692 PTPRZ1P23471 2315 aaPredicted RBP0.22□□□□□ -2.37
COL4A3BP-205ENST00000508692 ZFYVE26Q68DK2 2539 aa0.21□□□□□ -2.38
COL4A3BP-205ENST00000508692 A0A0D9SFI3 127 aa0.21□□□□□ -2.38
COL4A3BP-205ENST00000508692 RBM3P98179 157 aaKnown RBP0.21□□□□□ -2.38
COL4A3BP-205ENST00000508692 CFAP126Q5VTH2 177 aa0.21□□□□□ -2.38
COL4A3BP-205ENST00000508692 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.21□□□□□ -2.38
COL4A3BP-205ENST00000508692 LSM10Q969L4 123 aaKnown RBP0.21□□□□□ -2.38
COL4A3BP-205ENST00000508692 SPEF2Q9C093 1822 aa0.21□□□□□ -2.38
COL4A3BP-205ENST00000508692 POLQO75417 2590 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 ZNF815PA8K554 130 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 Q56UQ5 140 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 C10orf128Q5T292 105 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 SSBP3-AS1Q7Z2R9 100 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 PPP3R2Q96LZ3 170 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 CNFNQ9BYD5 112 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 BCL9LQ86UU0 1499 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 SYNE2Q8WXH0 6885 aaKnown RBP0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 PPIP5K1Q6PFW1 1433 aa0.2□□□□□ -2.38
COL4A3BP-205ENST00000508692 ARFGEF1Q9Y6D6 1849 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms