RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SPCS1Q9Y6A9 102 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV1D-13A0A0B4J2D9 117 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 AVPP01185 164 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IGKCP01834 107 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 NMBP08949 121 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 FRMD6-AS1P0C7T7 363 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV1-13P0DP09 117 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 TRBV24-1A0A075B6N3 115 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 ODF3BA8MYP8 253 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 NDUFA1O15239 70 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV1-16P04430 117 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IGFBP3P17936 291 aaPredicted RBP2.27□□□□□ -2.05
NEDD4-208ENST00000508342 CXCL3P19876 107 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 CRYBA4P53673 196 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 C5orf38Q86SI9 138 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 LINC00479Q96M42 142 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 TPSG1Q9NRR2 321 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 C5orf42Q9H799 3197 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 A0A1W2PPI3 338 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 SH2D1AO60880 128 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 HAMPP81172 84 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 LYZL1Q6UWQ5 148 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 FAM19A2Q8N3H0 131 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV1-12A0A0C4DH73 117 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 PRR20EP86478 221 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 PRR20CP86479 221 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 PRR20DP86480 221 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 PRR20BP86481 221 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 PRR20AP86496 221 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 C9orf47Q6ZRZ4 202 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 UBL5Q9BZL1 73 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 A0A0A6YYD4 124 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV1-9A0A0C4DH69 117 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 C1orf134Q5TEV5 83 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 C9orf85Q96MD7 179 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 PRO0255Q9UI72 69 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 MKI67P46013 3256 aaKnown RBP2.26□□□□□ -2.05
NEDD4-208ENST00000508342 IGHV4-4A0A075B6R2 117 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 IGHV7-81A0A0B4J1V7 117 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 A0A1B0GV90 55 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 A0A1W2PPR1 153 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 HLA-DMBP28068 263 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 HERVK_113P63121 156 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 CASC2Q6XLA1 102 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 STPG4Q8N801 248 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 LYPD6BQ8NI32 183 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 DMBT1Q9UGM3 2413 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-208ENST00000508342 SDHAF1A6NFY7 115 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 SERF1AO75920 110 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 LINC00205P59089 165 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 OSTCQ9NRP0 149 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 IGKV2D-26A0A0A0MRZ7 120 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 CTSGP08311 255 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 RBM3P98179 157 aaKnown RBP2.26□□□□□ -2.05
NEDD4-208ENST00000508342 MSMPQ1L6U9 139 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 SHANK2-AS3Q9BTD1 123 aa2.26□□□□□ -2.05
NEDD4-208ENST00000508342 PARD6GQ9BYG4 376 aaPredicted RBP2.26□□□□□ -2.05
NEDD4-208ENST00000508342 CR1P17927 2039 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 D6R8Y8 96 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 C10orf99Q6UWK7 81 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 HIGD2AQ9BW72 106 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 WDR83OSQ9Y284 106 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 FSTL3O95633 263 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 CXCL2P19875 107 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 MRPS36P82909 103 aaKnown RBP2.25□□□□□ -2.05
NEDD4-208ENST00000508342 DYNAPQ8N1N2 210 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 RNASE2P10153 161 aaKnown RBP2.25□□□□□ -2.05
NEDD4-208ENST00000508342 DAZ2Q13117 558 aaKnown RBP2.25□□□□□ -2.05
NEDD4-208ENST00000508342 ATRAIDQ6UW56 229 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 DAZ4Q86SG3 579 aaKnown RBP2.25□□□□□ -2.05
NEDD4-208ENST00000508342 DAZ3Q9NR90 486 aaKnown RBP2.25□□□□□ -2.05
NEDD4-208ENST00000508342 TRBV19A0A075B6N1 114 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 MRPS12O15235 138 aaKnown RBP2.25□□□□□ -2.05
NEDD4-208ENST00000508342 TRBV12-3P01733 135 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 LINC01545Q5VT33 79 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 MRPL55Q7Z7F7 128 aaKnown RBP2.25□□□□□ -2.05
NEDD4-208ENST00000508342 CDH23Q9H251 3354 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 FAM236DA0A1B0GTK5 79 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 H0Y9J4 135 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 FAM236CP0DP71 79 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 MAP6D1Q9H9H5 199 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 XIRP2A4UGR9 3374 aa2.25□□□□□ -2.05
NEDD4-208ENST00000508342 IGLV5-52A0A0A0MRZ9 124 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 TRAV13-2A0A0B4J235 113 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 SIVA1O15304 175 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 NDUFC2O95298 119 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 BRI3O95415 125 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 IFITM3Q01628 133 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 C2orf82Q6UX34 121 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 LINC00322Q6ZN03 302 aaPredicted RBP2.24□□□□□ -2.05
NEDD4-208ENST00000508342 TRAV26-2A0A0B4J265 109 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 COLCA2A8K830 154 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 HSD52Q0P140 79 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 GFI1Q99684 422 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 ZNF581Q9P0T4 197 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 ANKRD17O75179 2603 aaKnown RBP2.24□□□□□ -2.05
NEDD4-208ENST00000508342 A0A096LNI7 61 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 TRAV8-4A0A0B4J246 113 aa2.24□□□□□ -2.05
NEDD4-208ENST00000508342 IGHV4-28A0A0C4DH34 117 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms