RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ELOBQ15370 118 aa8.52□□□□□ -1.05
HMGCS1-205ENST00000508319 Q8N976 141 aa8.52□□□□□ -1.05
HMGCS1-205ENST00000508319 DERL1Q9BUN8 251 aa8.52□□□□□ -1.05
HMGCS1-205ENST00000508319 MUC21A0A0G2JKD1 596 aa8.51□□□□□ -1.05
HMGCS1-205ENST00000508319 MUC21A0A140T8X8 626 aa8.51□□□□□ -1.05
HMGCS1-205ENST00000508319 H2AFB1P0C5Y9 115 aa8.51□□□□□ -1.05
HMGCS1-205ENST00000508319 RPL35P42766 123 aaKnown RBP8.51□□□□□ -1.05
HMGCS1-205ENST00000508319 MPV17L2Q567V2 206 aa8.51□□□□□ -1.05
HMGCS1-205ENST00000508319 KCNIP4Q6PIL6 250 aa8.51□□□□□ -1.05
HMGCS1-205ENST00000508319 SCXQ7RTU7 201 aa8.51□□□□□ -1.05
HMGCS1-205ENST00000508319 RBFOX3A6NFN3 312 aa8.5□□□□□ -1.05
HMGCS1-205ENST00000508319 Q0VG73 95 aa8.5□□□□□ -1.05
HMGCS1-205ENST00000508319 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
HMGCS1-205ENST00000508319 TMUB2Q71RG4 321 aa8.5□□□□□ -1.05
HMGCS1-205ENST00000508319 C11orf52Q96A22 123 aa8.5□□□□□ -1.05
HMGCS1-205ENST00000508319 C1orf43Q9BWL3 253 aa8.5□□□□□ -1.05
HMGCS1-205ENST00000508319 KIF25-AS1Q9Y6Z4 181 aa8.5□□□□□ -1.05
HMGCS1-205ENST00000508319 TMEM262E9PQX1 116 aa8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 GHRHP01286 108 aa8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 PLA2G1BP04054 148 aaKnown RBP8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 EIF5AP63241 154 aaKnown RBP8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 CCL20P78556 96 aa8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 SPANXN1Q5VSR9 72 aa8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 AP1S3Q96PC3 154 aa8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 MANBALQ9NQG1 85 aa8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 VAX2Q9UIW0 290 aa8.49□□□□□ -1.05
HMGCS1-205ENST00000508319 F5H697 171 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 IGLV2-8P01709 118 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 CRPP02741 224 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 SSTP61278 116 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 CENPWQ5EE01 88 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 NTM-AS1Q6ZSK4 140 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 C15orf54Q8N8G6 183 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 SVIPQ8NHG7 77 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 GNG13Q9P2W3 67 aa8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 LRP1Q07954 4544 aaKnown RBP8.48□□□□□ -1.05
HMGCS1-205ENST00000508319 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
HMGCS1-205ENST00000508319 ANGP03950 147 aaKnown RBP8.47□□□□□ -1.05
HMGCS1-205ENST00000508319 IGLC6P0CF74 106 aa8.47□□□□□ -1.05
HMGCS1-205ENST00000508319 GZMBP10144 247 aa8.47□□□□□ -1.05
HMGCS1-205ENST00000508319 CHCHD5Q9BSY4 110 aa8.47□□□□□ -1.05
HMGCS1-205ENST00000508319 CHAC1Q9BUX1 264 aa8.47□□□□□ -1.05
HMGCS1-205ENST00000508319 C19orf71A6NCJ1 209 aa8.46□□□□□ -1.06
HMGCS1-205ENST00000508319 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
HMGCS1-205ENST00000508319 C14orf177Q52M58 125 aa8.46□□□□□ -1.06
HMGCS1-205ENST00000508319 SMIM17P0DL12 118 aa8.45□□□□□ -1.06
HMGCS1-205ENST00000508319 PKIAP61925 76 aa8.45□□□□□ -1.06
HMGCS1-205ENST00000508319 MIAQ16674 131 aa8.45□□□□□ -1.06
HMGCS1-205ENST00000508319 TMEM97Q5BJF2 176 aa8.45□□□□□ -1.06
HMGCS1-205ENST00000508319 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.45□□□□□ -1.06
HMGCS1-205ENST00000508319 CIRBP-AS1Q8TBR5 109 aa8.45□□□□□ -1.06
HMGCS1-205ENST00000508319 TPPP3Q9BW30 176 aa8.45□□□□□ -1.06
HMGCS1-205ENST00000508319 PRR34Q9NV39 138 aa8.45□□□□□ -1.06
HMGCS1-205ENST00000508319 TRBV20OR9-2A0A075B6H5 130 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 TRBV25-1A0A075B6N4 114 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 M0QY20 66 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 HLA-DQA1P01909 254 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 GNG4P50150 75 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 RAB5CP51148 216 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 RBX1P62877 108 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 IQCJQ1A5X6 159 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 CLPSL2Q6UWE3 100 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 FER1L6-AS1Q8NA97 138 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 OR2D3Q8NGH3 330 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 SMIM12Q96EX1 92 aa8.44□□□□□ -1.06
HMGCS1-205ENST00000508319 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 RAB19A4D1S5 217 aa8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 MGPP08493 103 aa8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 RPS20P60866 119 aaKnown RBP8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 MEF2BQ02080 365 aaPredicted RBP8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 GAGE6Q13070 117 aa8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 SUMO4Q6EEV6 95 aa8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 KRTAP26-1Q6PEX3 210 aa8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 DEFB104AQ8WTQ1 72 aa8.43□□□□□ -1.06
HMGCS1-205ENST00000508319 H7C1H1 209 aa8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 PDE6DO43924 150 aa8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 PRSS1P07477 247 aa8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 SULT1A2P50226 295 aa8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 CACNG7P62955 275 aa8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 LINC00269Q8N2A0 174 aa8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 DAZAP1Q96EP5 407 aaKnown RBP8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
HMGCS1-205ENST00000508319 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
HMGCS1-205ENST00000508319 P01737 135 aa8.41□□□□□ -1.06
HMGCS1-205ENST00000508319 BCL2P10415 239 aa8.41□□□□□ -1.06
HMGCS1-205ENST00000508319 EIF5AL1Q6IS14 154 aaKnown RBP8.41□□□□□ -1.06
HMGCS1-205ENST00000508319 IGHV1-24A0A0C4DH33 117 aa8.4□□□□□ -1.06
HMGCS1-205ENST00000508319 F2Z2F3 143 aa8.4□□□□□ -1.06
HMGCS1-205ENST00000508319 IFNA1P01562 189 aa8.4□□□□□ -1.06
HMGCS1-205ENST00000508319 CTRLP40313 264 aa8.4□□□□□ -1.06
HMGCS1-205ENST00000508319 C20orf203Q8NBC4 194 aa8.4□□□□□ -1.06
HMGCS1-205ENST00000508319 XKRY2A2RUG3 117 aa8.39□□□□□ -1.07
HMGCS1-205ENST00000508319 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
HMGCS1-205ENST00000508319 REG3AQ06141 175 aa8.39□□□□□ -1.07
HMGCS1-205ENST00000508319 RASL11AQ6T310 242 aa8.39□□□□□ -1.07
HMGCS1-205ENST00000508319 LYZL1Q6UWQ5 148 aa8.39□□□□□ -1.07
HMGCS1-205ENST00000508319 TCTE3Q8IZS6 198 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms