RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 ISOC2Q96AB3 205 aa13.12□□□□□ -0.31
LMNA-221ENST00000506981 IGHV3-30P01768 117 aa13.11□□□□□ -0.31
LMNA-221ENST00000506981 IGHV3-33P01772 117 aa13.11□□□□□ -0.31
LMNA-221ENST00000506981 IGHV3-30-3P0DP02 117 aa13.11□□□□□ -0.31
LMNA-221ENST00000506981 IGHV3-30-5P0DP03 117 aa13.11□□□□□ -0.31
LMNA-221ENST00000506981 SUMO4Q6EEV6 95 aa13.11□□□□□ -0.31
LMNA-221ENST00000506981 GFRA4Q9GZZ7 299 aa13.11□□□□□ -0.31
LMNA-221ENST00000506981 TNFRSF18Q9Y5U5 241 aa13.11□□□□□ -0.31
LMNA-221ENST00000506981 A0A1B0GVY2 172 aa13.1□□□□□ -0.31
LMNA-221ENST00000506981 DNAJC30Q96LL9 226 aa13.1□□□□□ -0.31
LMNA-221ENST00000506981 URGCP-MRPS24S4R325 110 aa13.1□□□□□ -0.31
LMNA-221ENST00000506981 FAM231BA6NCW3 169 aa13.09□□□□□ -0.31
LMNA-221ENST00000506981 HIGD1CA8MV81 97 aa13.09□□□□□ -0.31
LMNA-221ENST00000506981 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
LMNA-221ENST00000506981 CLLU1Q5K131 121 aa13.09□□□□□ -0.31
LMNA-221ENST00000506981 KCNIP4Q6PIL6 250 aa13.09□□□□□ -0.31
LMNA-221ENST00000506981 RASL11AQ6T310 242 aa13.09□□□□□ -0.31
LMNA-221ENST00000506981 M0QY20 66 aa13.08□□□□□ -0.32
LMNA-221ENST00000506981 FOXA3P55318 350 aaPredicted RBP13.08□□□□□ -0.32
LMNA-221ENST00000506981 DAZ4Q86SG3 579 aaKnown RBP13.08□□□□□ -0.32
LMNA-221ENST00000506981 DAZ3Q9NR90 486 aaKnown RBP13.08□□□□□ -0.32
LMNA-221ENST00000506981 V9GYV3 84 aa13.08□□□□□ -0.32
LMNA-221ENST00000506981 A0A1B0GUT8 65 aa13.07□□□□□ -0.32
LMNA-221ENST00000506981 DNAH2Q9P225 4427 aa13.06□□□□□ -0.32
LMNA-221ENST00000506981 DNAH17Q9UFH2 4485 aa13.06□□□□□ -0.32
LMNA-221ENST00000506981 IBA57-AS1B1ANH7 110 aa13.06□□□□□ -0.32
LMNA-221ENST00000506981 A0A087WX48 190 aa13.05□□□□□ -0.32
LMNA-221ENST00000506981 TRBV6-8A0A0A6YYG3 113 aa13.05□□□□□ -0.32
LMNA-221ENST00000506981 Q6ZRN7 208 aaPredicted RBP13.05□□□□□ -0.32
LMNA-221ENST00000506981 NIT1Q86X76 327 aa13.05□□□□□ -0.32
LMNA-221ENST00000506981 NIT2Q9NQR4 276 aa13.05□□□□□ -0.32
LMNA-221ENST00000506981 NAT8BQ9UHF3 227 aa13.05□□□□□ -0.32
LMNA-221ENST00000506981 BIRC6Q9NR09 4857 aa13.05□□□□□ -0.32
LMNA-221ENST00000506981 EREGO14944 169 aa13.04□□□□□ -0.32
LMNA-221ENST00000506981 PKIAP61925 76 aa13.04□□□□□ -0.32
LMNA-221ENST00000506981 RIGQ13278 110 aa13.04□□□□□ -0.32
LMNA-221ENST00000506981 LAGE3Q14657 143 aa13.04□□□□□ -0.32
LMNA-221ENST00000506981 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
LMNA-221ENST00000506981 Q9HAA7 133 aa13.04□□□□□ -0.32
LMNA-221ENST00000506981 PSCAO43653 123 aa13.03□□□□□ -0.32
LMNA-221ENST00000506981 FRZBQ92765 325 aa13.03□□□□□ -0.32
LMNA-221ENST00000506981 TRBV25-1A0A075B6N4 114 aa13.02□□□□□ -0.33
LMNA-221ENST00000506981 TMEM262E9PQX1 116 aa13.02□□□□□ -0.33
LMNA-221ENST00000506981 IFITM2Q01629 132 aa13.02□□□□□ -0.33
LMNA-221ENST00000506981 ELOBQ15370 118 aa13.02□□□□□ -0.33
LMNA-221ENST00000506981 Q8N3U1 123 aa13.02□□□□□ -0.33
LMNA-221ENST00000506981 NUP35Q8NFH5 326 aa13.02□□□□□ -0.33
LMNA-221ENST00000506981 CHCHD5Q9BSY4 110 aa13.02□□□□□ -0.33
LMNA-221ENST00000506981 TRAV26-2A0A0B4J265 109 aa13.01□□□□□ -0.33
LMNA-221ENST00000506981 GATD1Q8NB37 220 aa13.01□□□□□ -0.33
LMNA-221ENST00000506981 HECTD4Q9Y4D8 3996 aa13.01□□□□□ -0.33
LMNA-221ENST00000506981 TRAV8-3A0A0A6YYJ7 113 aa13□□□□□ -0.33
LMNA-221ENST00000506981 IGHV1-24A0A0C4DH33 117 aa13□□□□□ -0.33
LMNA-221ENST00000506981 PNRC1Q12796 327 aaPredicted RBP13□□□□□ -0.33
LMNA-221ENST00000506981 TMEM191AQ9H0A3 160 aa13□□□□□ -0.33
LMNA-221ENST00000506981 FAT2Q9NYQ8 4349 aa12.99□□□□□ -0.33
LMNA-221ENST00000506981 SMIM27A0A1W2PRY6 76 aa12.99□□□□□ -0.33
LMNA-221ENST00000506981 TM2D2Q9BX73 214 aa12.99□□□□□ -0.33
LMNA-221ENST00000506981 PPP1R2P9O14990 202 aa12.98□□□□□ -0.33
LMNA-221ENST00000506981 NTM-AS1Q6ZSK4 140 aa12.98□□□□□ -0.33
LMNA-221ENST00000506981 SPATA12Q7Z6I5 190 aa12.98□□□□□ -0.33
LMNA-221ENST00000506981 RMI2Q96E14 147 aa12.98□□□□□ -0.33
LMNA-221ENST00000506981 KLK12Q9UKR0 248 aa12.98□□□□□ -0.33
LMNA-221ENST00000506981 COTL1Q14019 142 aa12.97□□□□□ -0.33
LMNA-221ENST00000506981 IQCJQ1A5X6 159 aa12.97□□□□□ -0.33
LMNA-221ENST00000506981 UQCC3Q6UW78 93 aa12.97□□□□□ -0.33
LMNA-221ENST00000506981 RPL39LQ96EH5 51 aaKnown RBP12.97□□□□□ -0.33
LMNA-221ENST00000506981 A0A1B0GW15 77 aa12.96□□□□□ -0.33
LMNA-221ENST00000506981 C16orf90A8MZG2 172 aa12.96□□□□□ -0.33
LMNA-221ENST00000506981 TMEM243Q9BU79 118 aa12.96□□□□□ -0.33
LMNA-221ENST00000506981 A0A087WTM6 91 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 CRPP02741 224 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 S100A8P05109 93 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 GAGE6Q13070 117 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 MPV17L2Q567V2 206 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 AMN1Q8IY45 258 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 UBE2WQ96B02 151 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 MRAP2Q96G30 205 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 COX11Q9Y6N1 276 aa12.95□□□□□ -0.34
LMNA-221ENST00000506981 UBE2L6O14933 153 aa12.94□□□□□ -0.34
LMNA-221ENST00000506981 MT-ND4LP03901 98 aa12.94□□□□□ -0.34
LMNA-221ENST00000506981 ANGP03950 147 aaKnown RBP12.94□□□□□ -0.34
LMNA-221ENST00000506981 AMTP48728 403 aa12.94□□□□□ -0.34
LMNA-221ENST00000506981 Q0VG73 95 aa12.94□□□□□ -0.34
LMNA-221ENST00000506981 RAB4AP20338 218 aa12.93□□□□□ -0.34
LMNA-221ENST00000506981 CAMPP49913 170 aa12.93□□□□□ -0.34
LMNA-221ENST00000506981 ATRAIDQ6UW56 229 aa12.93□□□□□ -0.34
LMNA-221ENST00000506981 ANAPC16Q96DE5 110 aa12.93□□□□□ -0.34
LMNA-221ENST00000506981 SDHAF1A6NFY7 115 aa12.92□□□□□ -0.34
LMNA-221ENST00000506981 MRPL54Q6P161 138 aaKnown RBP12.92□□□□□ -0.34
LMNA-221ENST00000506981 RNF185Q96GF1 192 aa12.92□□□□□ -0.34
LMNA-221ENST00000506981 ST20Q9HBF5 79 aa12.92□□□□□ -0.34
LMNA-221ENST00000506981 PKD1P98161 4303 aa12.92□□□□□ -0.34
LMNA-221ENST00000506981 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
LMNA-221ENST00000506981 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
LMNA-221ENST00000506981 F8W036 122 aa12.91□□□□□ -0.34
LMNA-221ENST00000506981 NCR2O95944 276 aa12.91□□□□□ -0.34
LMNA-221ENST00000506981 PPP1R17O96001 155 aa12.91□□□□□ -0.34
LMNA-221ENST00000506981 APCSP02743 223 aa12.91□□□□□ -0.34
LMNA-221ENST00000506981 RBX1P62877 108 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms