RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 TWIST1Q15672 202 aa3.93□□□□□ -1.78
USP46-206ENST00000506707 NUP35Q8NFH5 326 aa3.93□□□□□ -1.78
USP46-206ENST00000506707 ZNRF2Q8NHG8 242 aa3.93□□□□□ -1.78
USP46-206ENST00000506707 KMT2AQ03164 3969 aa3.93□□□□□ -1.78
USP46-206ENST00000506707 GAGE12JA6NER3 117 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 M0QY20 66 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 LINC00694P0DN24 101 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 SRIP30626 198 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 FAM3BP58499 235 aaPredicted RBP3.92□□□□□ -1.78
USP46-206ENST00000506707 GAGE1Q13065 139 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 GAGE4Q13068 117 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 GAGE5Q13069 117 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 GAGE13Q4V321 117 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 C10orf91Q5T1B1 145 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 SH2D6Q7Z4S9 175 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 AP1S3Q96PC3 154 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 UPK3BQ9BT76 320 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 SEC11CQ9BY50 192 aa3.92□□□□□ -1.78
USP46-206ENST00000506707 TRBV7-3A0A075B6L6 115 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 TRBV10-1A0A0K0K1A3 114 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 A0A1B0GUT8 65 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 F5H697 171 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 F8W036 122 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 PPP1R2P9O14990 202 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 TRGC1P0CF51 173 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 SMIM17P0DL12 118 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 TIRAPP58753 221 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 ZNF56Q15929 161 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 Q6ZR54 194 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 UBE2DNLQ8IWF7 75 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 ATP6V0E2Q8NHE4 81 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 ANAPC16Q96DE5 110 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 DPH3P1Q9H4G8 78 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 Q9H8V8 135 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 NAT8BQ9UHF3 227 aa3.91□□□□□ -1.78
USP46-206ENST00000506707 MRPS16Q9Y3D3 137 aaKnown RBP3.91□□□□□ -1.78
USP46-206ENST00000506707 NACAE9PAV3 2078 aa3.9□□□□□ -1.78
USP46-206ENST00000506707 IGLV2-18A0A075B6J9 118 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 MT-ND4LP03901 98 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 UBE2D3P61077 147 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 UBE2D2P62837 147 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 RPL36AP83881 106 aaKnown RBP3.9□□□□□ -1.79
USP46-206ENST00000506707 RIGQ13278 110 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 SUMO4Q6EEV6 95 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 GATD1Q8NB37 220 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 NEXN-AS1Q8NBZ9 246 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 RPL36ALQ969Q0 106 aaKnown RBP3.9□□□□□ -1.79
USP46-206ENST00000506707 BORCS7Q96B45 105 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 RNF185Q96GF1 192 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 TMEM191AQ9H0A3 160 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 GTSF1LQ9H1H1 148 aa3.9□□□□□ -1.79
USP46-206ENST00000506707 CARHSP1Q9Y2V2 147 aaKnown RBP3.9□□□□□ -1.79
USP46-206ENST00000506707 TRAV26-2A0A0B4J265 109 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 A0A1B0GXF2 115 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 M0R2N4 97 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 MGPP08493 103 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 RAB4AP20338 218 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 LELP1Q5T871 98 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 RASL11AQ6T310 242 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 SMIM15Q7Z3B0 74 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 WFDC10BQ8IUB3 73 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 AMN1Q8IY45 258 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 DNAJC30Q96LL9 226 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 NIT2Q9NQR4 276 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 DNAH2Q9P225 4427 aa3.89□□□□□ -1.79
USP46-206ENST00000506707 DNAH6Q9C0G6 4158 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 IGHV3-38A0A0C4DH36 116 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 NBDYA0A0U1RRE5 68 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 A0A1B0GW15 77 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 C7orf77A4D0Y5 90 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 H7C1H1 209 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 SIVA1O15304 175 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 DNAH10OSP0CZ25 163 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 CAMPP49913 170 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 FAM104BQ5XKR9 115 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 MRPL54Q6P161 138 aaKnown RBP3.88□□□□□ -1.79
USP46-206ENST00000506707 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 SLC7A5P1Q8MH63 180 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 CLRN3Q8NCR9 226 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 FRZBQ92765 325 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 RPL39LQ96EH5 51 aaKnown RBP3.88□□□□□ -1.79
USP46-206ENST00000506707 IMMP2LQ96T52 175 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 CTDSP1Q9GZU7 261 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 TMEM242Q9NWH2 141 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 TNFRSF18Q9Y5U5 241 aa3.88□□□□□ -1.79
USP46-206ENST00000506707 A0A087WWC5 75 aa3.87□□□□□ -1.79
USP46-206ENST00000506707 TRBV6-8A0A0A6YYG3 113 aa3.87□□□□□ -1.79
USP46-206ENST00000506707 TRAV8-6A0A0B4J262 113 aa3.87□□□□□ -1.79
USP46-206ENST00000506707 TRBV6-5A0A0K0K1A5 114 aa3.87□□□□□ -1.79
USP46-206ENST00000506707 HBBP68871 147 aa3.87□□□□□ -1.79
USP46-206ENST00000506707 MRPL51Q4U2R6 128 aaKnown RBP3.87□□□□□ -1.79
USP46-206ENST00000506707 OR10J3Q5JRS4 329 aa3.87□□□□□ -1.79
USP46-206ENST00000506707 ATP5L2Q7Z4Y8 100 aa3.87□□□□□ -1.79
USP46-206ENST00000506707 DAZ4Q86SG3 579 aaKnown RBP3.87□□□□□ -1.79
USP46-206ENST00000506707 BTF3L4Q96K17 158 aa3.87□□□□□ -1.79
USP46-206ENST00000506707 DAZ3Q9NR90 486 aaKnown RBP3.87□□□□□ -1.79
USP46-206ENST00000506707 DNAH10Q8IVF4 4471 aa3.86□□□□□ -1.79
USP46-206ENST00000506707 SMKR1H3BMG3 65 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms