RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 PANO1I0J062 215 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 MGPP08493 103 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 CHTF8P0CG12 524 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 SMIM17P0DL12 118 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 CRIP1P50238 77 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 RAB4BP61018 213 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 PKIAP61925 76 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 RPL19P84098 196 aaKnown RBP5.3□□□□□ -1.56
SNF8-204ENST00000506104 SERF2P84101 59 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 IFITM3Q01628 133 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 AKR1C8PQ5T2L2 129 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 SPANXN1Q5VSR9 72 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 C9orf163Q8N9P6 203 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 NEXN-AS1Q8NBZ9 246 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 DERL1Q9BUN8 251 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 ZNF471Q9BX82 626 aaPredicted RBP5.3□□□□□ -1.56
SNF8-204ENST00000506104 TNFSF18Q9UNG2 199 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 UBR4Q5T4S7 5183 aa5.3□□□□□ -1.56
SNF8-204ENST00000506104 TRBV25-1A0A075B6N4 114 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 IGHV3-64A0A075B6Q5 118 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 FXYD6-FXYD2A0A087WZ82 144 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 A0A1B0GV50 99 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 FAM74A7A6NL05 159 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 B5MCH6 92 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 H2AFB1P0C5Y9 115 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 RBX1P62877 108 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 RPL7L1Q6DKI1 246 aaKnown RBP5.29□□□□□ -1.56
SNF8-204ENST00000506104 PRR27Q6MZM9 219 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 INO80EQ8NBZ0 244 aaPredicted RBP5.29□□□□□ -1.56
SNF8-204ENST00000506104 OR10AG1Q8NH19 301 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 SUN5Q8TC36 379 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 GTSF1Q8WW33 167 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 HIST1H2BAQ96A08 127 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 FMC1Q96HJ9 113 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 MARVELD1Q9BSK0 173 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 TPPP3Q9BW30 176 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 ZFP30Q9Y2G7 519 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 ALG5Q9Y673 324 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 DNAH8Q96JB1 4490 aa5.29□□□□□ -1.56
SNF8-204ENST00000506104 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.28□□□□□ -1.56
SNF8-204ENST00000506104 MAP1LC3B2A6NCE7 125 aa5.28□□□□□ -1.56
SNF8-204ENST00000506104 ZNF726P1Q15940 193 aa5.28□□□□□ -1.56
SNF8-204ENST00000506104 DNLZQ5SXM8 178 aa5.28□□□□□ -1.56
SNF8-204ENST00000506104 Q6ZRU5 148 aa5.28□□□□□ -1.56
SNF8-204ENST00000506104 LYPD6BQ8NI32 183 aa5.28□□□□□ -1.56
SNF8-204ENST00000506104 C7orf33Q8WU49 177 aa5.28□□□□□ -1.56
SNF8-204ENST00000506104 MAP1LC3BQ9GZQ8 125 aa5.28□□□□□ -1.56
SNF8-204ENST00000506104 MED28Q9H204 178 aa5.28□□□□□ -1.56
SNF8-204ENST00000506104 A0A087WYN8 130 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 IGHV1-24A0A0C4DH33 117 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 IGKV2-24A0A0C4DH68 120 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 TRBV6-1A0A0K0K1D8 114 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 PHOX2AO14813 284 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 MT1HL1P0DM35 61 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 SULT1A2P50226 295 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 REG3AQ06141 175 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 ZNF674Q2M3X9 581 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 MAJINQ3KP22 176 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 TMEM97Q5BJF2 176 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 SDIM1Q6ZPB5 146 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 NTM-AS1Q6ZSK4 140 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 OR10G8Q8NGN5 311 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 AQP10Q96PS8 301 aa5.27□□□□□ -1.57
SNF8-204ENST00000506104 NKX6-2Q9C056 277 aaPredicted RBP5.27□□□□□ -1.57
SNF8-204ENST00000506104 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
SNF8-204ENST00000506104 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
SNF8-204ENST00000506104 UBE2L6O14933 153 aa5.26□□□□□ -1.57
SNF8-204ENST00000506104 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
SNF8-204ENST00000506104 PCP4P48539 62 aa5.26□□□□□ -1.57
SNF8-204ENST00000506104 HIGD2BQ4VC39 106 aa5.26□□□□□ -1.57
SNF8-204ENST00000506104 WDR73Q6P4I2 378 aa5.26□□□□□ -1.57
SNF8-204ENST00000506104 PAGE4O60829 102 aa5.25□□□□□ -1.57
SNF8-204ENST00000506104 PFDN1O60925 122 aa5.25□□□□□ -1.57
SNF8-204ENST00000506104 LTAP01374 205 aa5.25□□□□□ -1.57
SNF8-204ENST00000506104 NKX2-5P52952 324 aaPredicted RBP5.25□□□□□ -1.57
SNF8-204ENST00000506104 Q5BKY6 102 aa5.25□□□□□ -1.57
SNF8-204ENST00000506104 BAGE2Q86Y30 109 aa5.25□□□□□ -1.57
SNF8-204ENST00000506104 AP1S3Q96PC3 154 aa5.25□□□□□ -1.57
SNF8-204ENST00000506104 TMEM243Q9BU79 118 aa5.25□□□□□ -1.57
SNF8-204ENST00000506104 KIF25-AS1Q9Y6Z4 181 aa5.25□□□□□ -1.57
SNF8-204ENST00000506104 GAGE12HA6NDE8 117 aa5.24□□□□□ -1.57
SNF8-204ENST00000506104 GAGE10A6NGK3 116 aa5.24□□□□□ -1.57
SNF8-204ENST00000506104 COX6A2Q02221 97 aa5.24□□□□□ -1.57
SNF8-204ENST00000506104 LINC00299Q6ZSB3 139 aa5.24□□□□□ -1.57
SNF8-204ENST00000506104 PRR34Q9NV39 138 aa5.24□□□□□ -1.57
SNF8-204ENST00000506104 IGLV4-60A0A075B6I1 120 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 TRAV8-4A0A0B4J246 113 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 SCO2A0A1W2PP80 73 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 H7C1H1 209 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 P01737 135 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 GZMBP10144 247 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 PTTG1IPP53801 180 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 KRTAP26-1Q6PEX3 210 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 C20orf203Q8NBC4 194 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 SPACA4Q8TDM5 124 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
SNF8-204ENST00000506104 ARPC5O15511 151 aa5.22□□□□□ -1.57
SNF8-204ENST00000506104 S100A9P06702 114 aaKnown RBP5.22□□□□□ -1.57
SNF8-204ENST00000506104 AMTP48728 403 aa5.22□□□□□ -1.57
SNF8-204ENST00000506104 FHITP49789 147 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms