RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 Q8NAQ8 132 aa5.18□□□□□ -1.58
NUP54-204ENST00000506098 GTSF1Q8WW33 167 aa5.18□□□□□ -1.58
NUP54-204ENST00000506098 DNAJC30Q96LL9 226 aa5.18□□□□□ -1.58
NUP54-204ENST00000506098 SPANXDQ9BXN6 97 aa5.18□□□□□ -1.58
NUP54-204ENST00000506098 CNFNQ9BYD5 112 aa5.18□□□□□ -1.58
NUP54-204ENST00000506098 MDFICQ9P1T7 246 aa5.18□□□□□ -1.58
NUP54-204ENST00000506098 SS18L2Q9UHA2 77 aa5.18□□□□□ -1.58
NUP54-204ENST00000506098 IGHV4-4A0A075B6R2 117 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 TRAV9-1A0A075B6T8 112 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 TMSB15BA0A087X1C1 80 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 GRIFINA4D1Z8 144 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 HIGD1CA8MV81 97 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 ARMS2P0C7Q2 107 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 HTN1P15515 57 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 S100A4P26447 101 aaKnown RBP5.17□□□□□ -1.58
NUP54-204ENST00000506098 AMTP48728 403 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 DAZ2Q13117 558 aaKnown RBP5.17□□□□□ -1.58
NUP54-204ENST00000506098 PIK3CD-AS1Q5SR53 167 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 LYZL1Q6UWQ5 148 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 Q6ZN92 141 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 NUP35Q8NFH5 326 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 SAMD10Q9BYL1 202 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 CYSLTR1Q9Y271 337 aa5.17□□□□□ -1.58
NUP54-204ENST00000506098 GAGE10A6NGK3 116 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 SNURFLB1AK76 121 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.16□□□□□ -1.58
NUP54-204ENST00000506098 H3BVH4 76 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 M0R2P5 195 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 TAX1BP3O14907 124 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 SPINK4O60575 86 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 NXPH4O95158 308 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 NHLRC4P0CG21 123 aaPredicted RBP5.16□□□□□ -1.58
NUP54-204ENST00000506098 CACNG7P62955 275 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 SEC11AP67812 179 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 LGALS9BQ3B8N2 356 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 ZFAND6Q6FIF0 208 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 RASL10AQ92737 203 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 MAP1LC3CQ9BXW4 147 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 C11orf68Q9H3H3 251 aaKnown RBP5.16□□□□□ -1.58
NUP54-204ENST00000506098 ZMAT4Q9H898 229 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 RETNQ9HD89 108 aa5.16□□□□□ -1.58
NUP54-204ENST00000506098 TIMM8BQ9Y5J9 83 aaPredicted RBP5.16□□□□□ -1.58
NUP54-204ENST00000506098 A0A087WX48 190 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 IGHV4-28A0A0C4DH34 117 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 A0A1B0GUT8 65 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 LYRM9A8MSI8 78 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 NTF3P20783 257 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 EVI2AP22794 236 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 SMCPP49901 116 aaPredicted RBP5.15□□□□□ -1.59
NUP54-204ENST00000506098 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
NUP54-204ENST00000506098 TMEM97Q5BJF2 176 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 KCNIP4Q6PIL6 250 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 ATP5L2Q7Z4Y8 100 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 LINC00612Q8N6U2 182 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 OR10AG1Q8NH19 301 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 PGLYRP4Q96LB8 373 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 PHLDA3Q9Y5J5 127 aa5.15□□□□□ -1.59
NUP54-204ENST00000506098 A0A1B0GX51 115 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 A0A1B0GXF2 115 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 GAGE12JA6NER3 117 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 K7EP34 96 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 GAGE7O76087 117 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 GAGE12FP0CL80 117 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 GAGE12GP0CL81 117 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 GAGE12IP0CL82 117 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 GAGE4Q13068 117 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 ZNF876PQ49A33 203 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 SPATA45Q537H7 98 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 AMMECR1LQ6DCA0 310 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 RNASEKQ6P5S7 137 aaKnown RBP5.14□□□□□ -1.59
NUP54-204ENST00000506098 RASL11AQ6T310 242 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 GATD1Q8NB37 220 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 SYT8Q8NBV8 401 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 C18orf15Q96N68 181 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 PMCHL2Q9BQD1 86 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 GTSF1LQ9H1H1 148 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 NOP10Q9NPE3 64 aaKnown RBP5.14□□□□□ -1.59
NUP54-204ENST00000506098 DKK2Q9UBU2 259 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 MEGF8Q7Z7M0 2845 aa5.14□□□□□ -1.59
NUP54-204ENST00000506098 TEX48A0A1B0GUV7 120 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 RIGQ13278 110 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 SPANXN1Q5VSR9 72 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 BORCS7Q96B45 105 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 ANAPC13Q9BS18 74 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 ST20Q9HBF5 79 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 SPANXB1Q9NS25 103 aaPredicted RBP5.13□□□□□ -1.59
NUP54-204ENST00000506098 MSRB1Q9NZV6 116 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 PAM16Q9Y3D7 125 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 KIF25-AS1Q9Y6Z4 181 aa5.13□□□□□ -1.59
NUP54-204ENST00000506098 TRAV4A0A0B4J268 109 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 MUC21A0A0G2JKD1 596 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 MUC21A0A140T8X8 626 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 A8MWV9 139 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 M0R381 172 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 RS1O15537 224 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 CRYGDP07320 174 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 SPART-AS1P0CW21 52 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 SEC61GP60059 68 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 HBBP68871 147 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms