RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SSBP4Q9BWG4 385 aaPredicted RBP16.13■□□□□ 0.17
HERC4-212ENST00000505760 ANGP03950 147 aaKnown RBP16.12■□□□□ 0.17
HERC4-212ENST00000505760 OR5AL1P0C617 328 aa16.12■□□□□ 0.17
HERC4-212ENST00000505760 H2AFB1P0C5Y9 115 aa16.11■□□□□ 0.17
HERC4-212ENST00000505760 PKIAP61925 76 aa16.11■□□□□ 0.17
HERC4-212ENST00000505760 TMUB2Q71RG4 321 aa16.11■□□□□ 0.17
HERC4-212ENST00000505760 A0A0D9SG52 128 aa16.1■□□□□ 0.17
HERC4-212ENST00000505760 KANTRA0A1W2PQU2 76 aa16.1■□□□□ 0.17
HERC4-212ENST00000505760 SMIM17P0DL12 118 aa16.1■□□□□ 0.17
HERC4-212ENST00000505760 HMSDA8MTL9 139 aa16.09■□□□□ 0.17
HERC4-212ENST00000505760 BCL2L11O43521 198 aa16.09■□□□□ 0.17
HERC4-212ENST00000505760 TMEM97Q5BJF2 176 aa16.08■□□□□ 0.16
HERC4-212ENST00000505760 CIRBP-AS1Q8TBR5 109 aa16.08■□□□□ 0.16
HERC4-212ENST00000505760 AP1S3Q96PC3 154 aa16.08■□□□□ 0.16
HERC4-212ENST00000505760 KRTAP29-1A8MX34 341 aaPredicted RBP16.07■□□□□ 0.16
HERC4-212ENST00000505760 HLA-DQA1P01909 254 aa16.07■□□□□ 0.16
HERC4-212ENST00000505760 RPL35P42766 123 aaKnown RBP16.07■□□□□ 0.16
HERC4-212ENST00000505760 EIF5AP63241 154 aaKnown RBP16.06■□□□□ 0.16
HERC4-212ENST00000505760 MIAQ16674 131 aa16.06■□□□□ 0.16
HERC4-212ENST00000505760 VAX2Q9UIW0 290 aa16.06■□□□□ 0.16
HERC4-212ENST00000505760 USP17L23D6RBM5 183 aa16.05■□□□□ 0.16
HERC4-212ENST00000505760 NTM-AS1Q6ZSK4 140 aa16.05■□□□□ 0.16
HERC4-212ENST00000505760 DERL1Q9BUN8 251 aa16.05■□□□□ 0.16
HERC4-212ENST00000505760 KIF25-AS1Q9Y6Z4 181 aa16.05■□□□□ 0.16
HERC4-212ENST00000505760 TPPP3Q9BW30 176 aa16.04■□□□□ 0.16
HERC4-212ENST00000505760 MANBALQ9NQG1 85 aa16.04■□□□□ 0.16
HERC4-212ENST00000505760 GNG13Q9P2W3 67 aa16.04■□□□□ 0.16
HERC4-212ENST00000505760 TRBV25-1A0A075B6N4 114 aa16.03■□□□□ 0.16
HERC4-212ENST00000505760 GAGE6Q13070 117 aa16.03■□□□□ 0.16
HERC4-212ENST00000505760 RBX1P62877 108 aa16.02■□□□□ 0.16
HERC4-212ENST00000505760 CLPSL2Q6UWE3 100 aa16.02■□□□□ 0.16
HERC4-212ENST00000505760 DAZAP1Q96EP5 407 aaKnown RBP16.02■□□□□ 0.16
HERC4-212ENST00000505760 IGLV2-8P01709 118 aa16.01■□□□□ 0.15
HERC4-212ENST00000505760 MGPP08493 103 aa16.01■□□□□ 0.15
HERC4-212ENST00000505760 LINC00269Q8N2A0 174 aa16.01■□□□□ 0.15
HERC4-212ENST00000505760 GZMBP10144 247 aa16■□□□□ 0.15
HERC4-212ENST00000505760 KRTAP10-4P60372 401 aaPredicted RBP16■□□□□ 0.15
HERC4-212ENST00000505760 CCL20P78556 96 aa16■□□□□ 0.15
HERC4-212ENST00000505760 CENPWQ5EE01 88 aa16■□□□□ 0.15
HERC4-212ENST00000505760 FER1L6-AS1Q8NA97 138 aa16■□□□□ 0.15
HERC4-212ENST00000505760 C11orf52Q96A22 123 aa16■□□□□ 0.15
HERC4-212ENST00000505760 PRR34Q9NV39 138 aa16■□□□□ 0.15
HERC4-212ENST00000505760 H7C1H1 209 aa15.99■□□□□ 0.15
HERC4-212ENST00000505760 PRSS1P07477 247 aa15.99■□□□□ 0.15
HERC4-212ENST00000505760 RPS20P60866 119 aaKnown RBP15.99■□□□□ 0.15
HERC4-212ENST00000505760 OR2D3Q8NGH3 330 aa15.99■□□□□ 0.15
HERC4-212ENST00000505760 IGHV1-24A0A0C4DH33 117 aa15.98■□□□□ 0.15
HERC4-212ENST00000505760 IQCJQ1A5X6 159 aa15.98■□□□□ 0.15
HERC4-212ENST00000505760 DGAT2L7PQ6IED9 249 aa15.98■□□□□ 0.15
HERC4-212ENST00000505760 LRP1Q07954 4544 aaKnown RBP15.97■□□□□ 0.15
HERC4-212ENST00000505760 M0QY20 66 aa15.97■□□□□ 0.15
HERC4-212ENST00000505760 IGLC6P0CF74 106 aa15.97■□□□□ 0.15
HERC4-212ENST00000505760 TRAV1-1A0A0B4J248 108 aa15.96■□□□□ 0.15
HERC4-212ENST00000505760 TEX46H3BTG2 121 aa15.96■□□□□ 0.15
HERC4-212ENST00000505760 CACNG7P62955 275 aa15.96■□□□□ 0.15
HERC4-212ENST00000505760 GNG4P50150 75 aa15.95■□□□□ 0.14
HERC4-212ENST00000505760 RAB5CP51148 216 aa15.95■□□□□ 0.14
HERC4-212ENST00000505760 SUMO4Q6EEV6 95 aa15.95■□□□□ 0.14
HERC4-212ENST00000505760 XKRY2A2RUG3 117 aa15.94■□□□□ 0.14
HERC4-212ENST00000505760 REG3AQ06141 175 aa15.94■□□□□ 0.14
HERC4-212ENST00000505760 EIF5AL1Q6IS14 154 aaKnown RBP15.94■□□□□ 0.14
HERC4-212ENST00000505760 C9orf163Q8N9P6 203 aa15.94■□□□□ 0.14
HERC4-212ENST00000505760 IGLV10-54A0A075B6I4 117 aa15.93■□□□□ 0.14
HERC4-212ENST00000505760 RAB19A4D1S5 217 aa15.93■□□□□ 0.14
HERC4-212ENST00000505760 C19orf71A6NCJ1 209 aa15.93■□□□□ 0.14
HERC4-212ENST00000505760 P01737 135 aa15.93■□□□□ 0.14
HERC4-212ENST00000505760 NKX2-5P52952 324 aaPredicted RBP15.93■□□□□ 0.14
HERC4-212ENST00000505760 KRTAP26-1Q6PEX3 210 aa15.93■□□□□ 0.14
HERC4-212ENST00000505760 SMIM12Q96EX1 92 aa15.93■□□□□ 0.14
HERC4-212ENST00000505760 PKHD1L1Q86WI1 4243 aa15.92■□□□□ 0.14
HERC4-212ENST00000505760 F2Z2F3 143 aa15.92■□□□□ 0.14
HERC4-212ENST00000505760 OXTP01178 125 aa15.92■□□□□ 0.14
HERC4-212ENST00000505760 RPL37AP61513 92 aaKnown RBP15.92■□□□□ 0.14
HERC4-212ENST00000505760 FAT3Q8TDW7 4589 aa15.92■□□□□ 0.14
HERC4-212ENST00000505760 PDE6DO43924 150 aa15.91■□□□□ 0.14
HERC4-212ENST00000505760 IFNA1P01562 189 aa15.91■□□□□ 0.14
HERC4-212ENST00000505760 TRGC1P0CF51 173 aa15.91■□□□□ 0.14
HERC4-212ENST00000505760 MEF2BQ02080 365 aaPredicted RBP15.91■□□□□ 0.14
HERC4-212ENST00000505760 RASL11AQ6T310 242 aa15.91■□□□□ 0.14
HERC4-212ENST00000505760 CLRN3Q8NCR9 226 aa15.91■□□□□ 0.14
HERC4-212ENST00000505760 TMEM243Q9BU79 118 aa15.91■□□□□ 0.14
HERC4-212ENST00000505760 LYZL1Q6UWQ5 148 aa15.9■□□□□ 0.14
HERC4-212ENST00000505760 MED9Q9NWA0 146 aa15.9■□□□□ 0.14
HERC4-212ENST00000505760 TRAV8-4A0A0B4J246 113 aa15.89■□□□□ 0.13
HERC4-212ENST00000505760 C20orf203Q8NBC4 194 aa15.89■□□□□ 0.13
HERC4-212ENST00000505760 BIN3Q9NQY0 253 aa15.89■□□□□ 0.13
HERC4-212ENST00000505760 A0A1B0GUV1 79 aa15.88■□□□□ 0.13
HERC4-212ENST00000505760 SERTAD4-AS1Q5TG53 156 aa15.88■□□□□ 0.13
HERC4-212ENST00000505760 DPH3P1Q9H4G8 78 aa15.88■□□□□ 0.13
HERC4-212ENST00000505760 NIT2Q9NQR4 276 aa15.88■□□□□ 0.13
HERC4-212ENST00000505760 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.88■□□□□ 0.13
HERC4-212ENST00000505760 hDV102S1A0JD36 115 aa15.87■□□□□ 0.13
HERC4-212ENST00000505760 NTF3P20783 257 aa15.87■□□□□ 0.13
HERC4-212ENST00000505760 SULT1A2P50226 295 aa15.87■□□□□ 0.13
HERC4-212ENST00000505760 TRBV20OR9-2A0A075B6H5 130 aa15.86■□□□□ 0.13
HERC4-212ENST00000505760 IGLV4-60A0A075B6I1 120 aa15.86■□□□□ 0.13
HERC4-212ENST00000505760 UBE2L6O14933 153 aa15.86■□□□□ 0.13
HERC4-212ENST00000505760 PGLYRP4Q96LB8 373 aa15.86■□□□□ 0.13
HERC4-212ENST00000505760 SDIM1Q6ZPB5 146 aa15.85■□□□□ 0.13
HERC4-212ENST00000505760 BCL2P10415 239 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms