RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 KRTAP26-1Q6PEX3 210 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 C15orf54Q8N8G6 183 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 OR11H4Q8NGC9 324 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 RMI2Q96E14 147 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 AQP10Q96PS8 301 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 ACTR3CQ9C0K3 210 aaPredicted RBP3.76□□□□□ -1.81
GYPB-205ENST00000505583 TNFSF18Q9UNG2 199 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 ALG5Q9Y673 324 aa3.76□□□□□ -1.81
GYPB-205ENST00000505583 TRBV7-3A0A075B6L6 115 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 TRBV6-8A0A0A6YYG3 113 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 TMEM262E9PQX1 116 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 RHODO00212 210 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 PRYO14603 147 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 HLA-DQA1P01909 254 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 DEFA3P59666 94 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 RPL19P84098 196 aaKnown RBP3.75□□□□□ -1.81
GYPB-205ENST00000505583 SERF2P84101 59 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 ZNF674Q2M3X9 581 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 CLPSL2Q6UWE3 100 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 NTM-AS1Q6ZSK4 140 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 COX8CQ7Z4L0 72 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 NEXN-AS1Q8NBZ9 246 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 PHLDA3Q9Y5J5 127 aa3.75□□□□□ -1.81
GYPB-205ENST00000505583 MUC21A0A0G2JKD1 596 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 TRBV10-1A0A0K0K1A3 114 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 MUC21A0A140T8X8 626 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 CTXND1A0A1B0GTU2 59 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 PAGE4O60829 102 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 MBP02144 154 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 ANGP03950 147 aaKnown RBP3.74□□□□□ -1.81
GYPB-205ENST00000505583 TPT1P13693 172 aaKnown RBP3.74□□□□□ -1.81
GYPB-205ENST00000505583 RPL36AP83881 106 aaKnown RBP3.74□□□□□ -1.81
GYPB-205ENST00000505583 Q0VG73 95 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 ELOBQ15370 118 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 FAM162BQ5T6X4 162 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 PRR27Q6MZM9 219 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 SDIM1Q6ZPB5 146 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 C9orf163Q8N9P6 203 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 OR10G8Q8NGN5 311 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 OR10AG1Q8NH19 301 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 RPL36ALQ969Q0 106 aaKnown RBP3.74□□□□□ -1.81
GYPB-205ENST00000505583 CHCHD7Q9BUK0 85 aa3.74□□□□□ -1.81
GYPB-205ENST00000505583 G3V3Q6 166 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 PTTG1O95997 202 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 LTAP01374 205 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 CRPP02741 224 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 SLPIP03973 132 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 SEC11BP0C7V7 166 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 FHITP49789 147 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 SSTP61278 116 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 RBX1P62877 108 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 Q6ZNX1 250 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 ZFP82Q8N141 532 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 HIST1H2BAQ96A08 127 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 CHCHD5Q9BSY4 110 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 ZFP30Q9Y2G7 519 aa3.73□□□□□ -1.81
GYPB-205ENST00000505583 IGLV10-54A0A075B6I4 117 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 TRBV6-1A0A0K0K1D8 114 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 MAP1LC3B2A6NCE7 125 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 CHTF8P0CG12 524 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 DEFA1P59665 94 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 RAB4BP61018 213 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 GAGE6Q13070 117 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 ZNF56Q15929 161 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 MIAQ16674 131 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 C14orf177Q52M58 125 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 KCNIP4Q6PIL6 250 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 LINC00269Q8N2A0 174 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 FMC1Q96HJ9 113 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 MAP1LC3BQ9GZQ8 125 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 GFRA4Q9GZZ7 299 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 CYTL1Q9NRR1 136 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 KIF25-AS1Q9Y6Z4 181 aa3.72□□□□□ -1.81
GYPB-205ENST00000505583 FXYD6-FXYD2A0A087WZ82 144 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 CAMPP49913 170 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 UBE2G1P62253 170 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 CIRBPQ14011 172 aaKnown RBP3.71□□□□□ -1.82
GYPB-205ENST00000505583 CST9LP1Q5W188 147 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 C20orf203Q8NBC4 194 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 DERL1Q9BUN8 251 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 MLST8Q9BVC4 326 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 ZNF471Q9BX82 626 aaPredicted RBP3.71□□□□□ -1.82
GYPB-205ENST00000505583 NKX6-2Q9C056 277 aaPredicted RBP3.71□□□□□ -1.82
GYPB-205ENST00000505583 MED28Q9H204 178 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 VAX2Q9UIW0 290 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 TNXBP22105 4242 aa3.71□□□□□ -1.82
GYPB-205ENST00000505583 IGLV4-60A0A075B6I1 120 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 A0A087WYN8 130 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 BORCS7-ASMTA0A0B4J1R7 106 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 A0A1B0GV50 99 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 SNAI2O43623 268 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 GIPP09681 153 aaPredicted RBP3.7□□□□□ -1.82
GYPB-205ENST00000505583 AKR1C3P42330 323 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 RAB5CP51148 216 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 REG3AQ06141 175 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 AKR1C8PQ5T2L2 129 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 PET117Q6UWS5 81 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms