RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 TNFRSF18Q9Y5U5 241 aa8.28□□□□□ -1.08
NFKB1-205ENST00000505458 HELZ2Q9BYK8 2649 aaKnown RBP8.27□□□□□ -1.08
NFKB1-205ENST00000505458 TAL2Q16559 108 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 C2orf91Q6ZV80 131 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 C11orf44Q8N8P7 122 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 TMEM263Q8WUH6 116 aaKnown RBP8.27□□□□□ -1.09
NFKB1-205ENST00000505458 MPV17L2Q567V2 206 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 UFSP1Q6NVU6 142 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 MXRA5Q9NR99 2828 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 TENM4Q6N022 2769 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 MAP1AP78559 2803 aaPredicted RBP8.27□□□□□ -1.09
NFKB1-205ENST00000505458 IGIPA6NJ69 53 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 IGHV3-53P01767 116 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 PF4P02776 101 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 SMAGPQ0VAQ4 97 aa8.27□□□□□ -1.09
NFKB1-205ENST00000505458 SONP18583 2426 aaKnown RBP8.26□□□□□ -1.09
NFKB1-205ENST00000505458 PDZD2O15018 2839 aa8.26□□□□□ -1.09
NFKB1-205ENST00000505458 IL17DQ8TAD2 202 aa8.26□□□□□ -1.09
NFKB1-205ENST00000505458 PYGO1Q9Y3Y4 419 aa8.26□□□□□ -1.09
NFKB1-205ENST00000505458 HIVEP2P31629 2446 aa8.26□□□□□ -1.09
NFKB1-205ENST00000505458 OR11H2Q8NH07 326 aa8.26□□□□□ -1.09
NFKB1-205ENST00000505458 C20orf203Q8NBC4 194 aa8.26□□□□□ -1.09
NFKB1-205ENST00000505458 C16orf74Q96GX8 76 aa8.26□□□□□ -1.09
NFKB1-205ENST00000505458 PRSS29PA6NIE9 313 aa8.25□□□□□ -1.09
NFKB1-205ENST00000505458 CFAP126Q5VTH2 177 aa8.25□□□□□ -1.09
NFKB1-205ENST00000505458 TRBV10-1A0A0K0K1A3 114 aa8.25□□□□□ -1.09
NFKB1-205ENST00000505458 TSHBP01222 138 aa8.25□□□□□ -1.09
NFKB1-205ENST00000505458 HTN1P15515 57 aa8.25□□□□□ -1.09
NFKB1-205ENST00000505458 XCL2Q9UBD3 114 aa8.25□□□□□ -1.09
NFKB1-205ENST00000505458 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
NFKB1-205ENST00000505458 E9PLD3 99 aa8.24□□□□□ -1.09
NFKB1-205ENST00000505458 ZNF25P17030 456 aaPredicted RBP8.24□□□□□ -1.09
NFKB1-205ENST00000505458 DAZ2Q13117 558 aaKnown RBP8.24□□□□□ -1.09
NFKB1-205ENST00000505458 GTSCR1Q86UQ5 136 aa8.24□□□□□ -1.09
NFKB1-205ENST00000505458 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
NFKB1-205ENST00000505458 C1orf158Q8N1D5 194 aa8.23□□□□□ -1.09
NFKB1-205ENST00000505458 RNASE8Q8TDE3 154 aaKnown RBP8.23□□□□□ -1.09
NFKB1-205ENST00000505458 TRAV4A0A0B4J268 109 aa8.23□□□□□ -1.09
NFKB1-205ENST00000505458 LINC00482Q8N8I6 264 aa8.23□□□□□ -1.09
NFKB1-205ENST00000505458 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
NFKB1-205ENST00000505458 SORL1Q92673 2214 aa8.23□□□□□ -1.09
NFKB1-205ENST00000505458 VPS13CQ709C8 3753 aa8.23□□□□□ -1.09
NFKB1-205ENST00000505458 C11orf86A6NJI1 115 aa8.23□□□□□ -1.09
NFKB1-205ENST00000505458 C9orf66Q5T8R8 295 aa8.23□□□□□ -1.09
NFKB1-205ENST00000505458 NFE4Q86UQ8 179 aa8.22□□□□□ -1.09
NFKB1-205ENST00000505458 CELSR1Q9NYQ6 3014 aa8.22□□□□□ -1.09
NFKB1-205ENST00000505458 C21orf62-AS1Q17RA5 79 aa8.22□□□□□ -1.09
NFKB1-205ENST00000505458 NEGR1Q7Z3B1 354 aa8.22□□□□□ -1.09
NFKB1-205ENST00000505458 PCP2Q8IVA1 136 aa8.22□□□□□ -1.09
NFKB1-205ENST00000505458 OR4C5Q8NGB2 326 aa8.22□□□□□ -1.09
NFKB1-205ENST00000505458 AZU1P20160 251 aa8.21□□□□□ -1.09
NFKB1-205ENST00000505458 COTL1Q14019 142 aa8.21□□□□□ -1.09
NFKB1-205ENST00000505458 CHAC1Q9BUX1 264 aa8.21□□□□□ -1.09
NFKB1-205ENST00000505458 TIMM21Q9BVV7 248 aa8.21□□□□□ -1.1
NFKB1-205ENST00000505458 C19orf73Q9NVV2 129 aa8.21□□□□□ -1.1
NFKB1-205ENST00000505458 H3BRM9 83 aa8.2□□□□□ -1.1
NFKB1-205ENST00000505458 VCX2Q9H322 139 aa8.2□□□□□ -1.1
NFKB1-205ENST00000505458 MRPL16Q9NX20 251 aaKnown RBP8.2□□□□□ -1.1
NFKB1-205ENST00000505458 TRBV25-1A0A075B6N4 114 aa8.2□□□□□ -1.1
NFKB1-205ENST00000505458 MYMXA0A1B0GTQ4 84 aa8.2□□□□□ -1.1
NFKB1-205ENST00000505458 CRLF1O75462 422 aa8.2□□□□□ -1.1
NFKB1-205ENST00000505458 IGKV2D-26A0A0A0MRZ7 120 aa8.2□□□□□ -1.1
NFKB1-205ENST00000505458 RPL36AP83881 106 aaKnown RBP8.2□□□□□ -1.1
NFKB1-205ENST00000505458 RRN3P1Q2M238 152 aa8.2□□□□□ -1.1
NFKB1-205ENST00000505458 RPL36ALQ969Q0 106 aaKnown RBP8.2□□□□□ -1.1
NFKB1-205ENST00000505458 CSMD1Q96PZ7 3565 aa8.2□□□□□ -1.1
NFKB1-205ENST00000505458 TRGV1A0A0A0MS02 117 aa8.19□□□□□ -1.1
NFKB1-205ENST00000505458 OVOL2Q9BRP0 275 aa8.19□□□□□ -1.1
NFKB1-205ENST00000505458 IGLV4-69A0A075B6H9 119 aa8.19□□□□□ -1.1
NFKB1-205ENST00000505458 DAZ4Q86SG3 579 aaKnown RBP8.19□□□□□ -1.1
NFKB1-205ENST00000505458 SMR3AQ99954 134 aa8.19□□□□□ -1.1
NFKB1-205ENST00000505458 DAZ3Q9NR90 486 aaKnown RBP8.19□□□□□ -1.1
NFKB1-205ENST00000505458 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
NFKB1-205ENST00000505458 TM2D2Q9BX73 214 aa8.19□□□□□ -1.1
NFKB1-205ENST00000505458 INAFM1C9JVW0 142 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 K7EQD1 137 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 P0DMU3 169 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 FAM231AP0DMU4 169 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 FAM231CP0DMU5 169 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 TRAV8-6A0A0B4J262 113 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 SMIM9A6NGZ8 99 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 TAX1BP3O14907 124 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 PRADC1Q9BSG0 188 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 ACANP16112 2415 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 MRPS36P82909 103 aaKnown RBP8.18□□□□□ -1.1
NFKB1-205ENST00000505458 PLEKHB2Q96CS7 222 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 NACAE9PAV3 2078 aa8.18□□□□□ -1.1
NFKB1-205ENST00000505458 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 TRBV7-3A0A075B6L6 115 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 TMEM238LA0A1B0GVL6 79 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 A6NJY4 79 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 AMELXQ99217 191 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 FASNP49327 2511 aaKnown RBP8.17□□□□□ -1.1
NFKB1-205ENST00000505458 UBE2V1Q13404 147 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 SVEP1Q4LDE5 3571 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 ITPR2Q14571 2701 aa8.17□□□□□ -1.1
NFKB1-205ENST00000505458 IGHV3-73A0A0B4J1V6 119 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms