RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 V9GYV3 84 aa13.78□□□□□ -0.2
HERC6-205ENST00000504905 RTL8CO15255 209 aa13.77□□□□□ -0.21
HERC6-205ENST00000504905 FOXA3P55318 350 aaPredicted RBP13.77□□□□□ -0.21
HERC6-205ENST00000504905 C6orf223Q8N319 242 aa13.77□□□□□ -0.21
HERC6-205ENST00000504905 NEXN-AS1Q8NBZ9 246 aa13.77□□□□□ -0.21
HERC6-205ENST00000504905 FAM231BA6NCW3 169 aa13.76□□□□□ -0.21
HERC6-205ENST00000504905 HIGD1CA8MV81 97 aa13.76□□□□□ -0.21
HERC6-205ENST00000504905 H7C1H1 209 aa13.76□□□□□ -0.21
HERC6-205ENST00000504905 UBE2D3P61077 147 aa13.76□□□□□ -0.21
HERC6-205ENST00000504905 UBE2D2P62837 147 aa13.76□□□□□ -0.21
HERC6-205ENST00000504905 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
HERC6-205ENST00000504905 TRAV9-2A0A087WT02 112 aa13.75□□□□□ -0.21
HERC6-205ENST00000504905 A0A087WWC5 75 aa13.75□□□□□ -0.21
HERC6-205ENST00000504905 IGHV3-38A0A0C4DH36 116 aa13.75□□□□□ -0.21
HERC6-205ENST00000504905 DNAH10OSP0CZ25 163 aa13.75□□□□□ -0.21
HERC6-205ENST00000504905 SUMO4Q6EEV6 95 aa13.75□□□□□ -0.21
HERC6-205ENST00000504905 ABCA13Q86UQ4 5058 aa13.75□□□□□ -0.21
HERC6-205ENST00000504905 A0A1B0GUT8 65 aa13.73□□□□□ -0.21
HERC6-205ENST00000504905 PRSS29PA6NIE9 313 aa13.73□□□□□ -0.21
HERC6-205ENST00000504905 K7EP13 123 aa13.73□□□□□ -0.21
HERC6-205ENST00000504905 M0QY20 66 aa13.73□□□□□ -0.21
HERC6-205ENST00000504905 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.73□□□□□ -0.21
HERC6-205ENST00000504905 PKD1P98161 4303 aa13.73□□□□□ -0.21
HERC6-205ENST00000504905 DYNC1H1Q14204 4646 aaKnown RBP13.73□□□□□ -0.21
HERC6-205ENST00000504905 BTF3P20290 206 aaKnown RBP13.72□□□□□ -0.21
HERC6-205ENST00000504905 TNFRSF18Q9Y5U5 241 aa13.72□□□□□ -0.21
HERC6-205ENST00000504905 TMEM218A2RU14 115 aa13.71□□□□□ -0.21
HERC6-205ENST00000504905 LINC01556Q5JQF7 62 aa13.71□□□□□ -0.21
HERC6-205ENST00000504905 RASL11AQ6T310 242 aa13.71□□□□□ -0.21
HERC6-205ENST00000504905 C10orf126Q8N4M7 172 aa13.71□□□□□ -0.21
HERC6-205ENST00000504905 DNAJC30Q96LL9 226 aa13.71□□□□□ -0.21
HERC6-205ENST00000504905 NAT8BQ9UHF3 227 aa13.71□□□□□ -0.21
HERC6-205ENST00000504905 DNAH11Q96DT5 4516 aa13.7□□□□□ -0.22
HERC6-205ENST00000504905 NUP35Q8NFH5 326 aa13.7□□□□□ -0.22
HERC6-205ENST00000504905 SMIM27A0A1W2PRY6 76 aa13.69□□□□□ -0.22
HERC6-205ENST00000504905 PNRC1Q12796 327 aaPredicted RBP13.69□□□□□ -0.22
HERC6-205ENST00000504905 RIGQ13278 110 aa13.69□□□□□ -0.22
HERC6-205ENST00000504905 IGHV3-30P01768 117 aa13.68□□□□□ -0.22
HERC6-205ENST00000504905 IGHV3-33P01772 117 aa13.68□□□□□ -0.22
HERC6-205ENST00000504905 IGHV3-30-3P0DP02 117 aa13.68□□□□□ -0.22
HERC6-205ENST00000504905 IGHV3-30-5P0DP03 117 aa13.68□□□□□ -0.22
HERC6-205ENST00000504905 DAZ4Q86SG3 579 aaKnown RBP13.68□□□□□ -0.22
HERC6-205ENST00000504905 DAZ3Q9NR90 486 aaKnown RBP13.68□□□□□ -0.22
HERC6-205ENST00000504905 NIT2Q9NQR4 276 aa13.67□□□□□ -0.22
HERC6-205ENST00000504905 TRAV26-2A0A0B4J265 109 aa13.66□□□□□ -0.22
HERC6-205ENST00000504905 F8W036 122 aa13.66□□□□□ -0.22
HERC6-205ENST00000504905 PPP1R2P9O14990 202 aa13.66□□□□□ -0.22
HERC6-205ENST00000504905 TMEM97Q5BJF2 176 aa13.66□□□□□ -0.22
HERC6-205ENST00000504905 GATD1Q8NB37 220 aa13.66□□□□□ -0.22
HERC6-205ENST00000504905 TMEM191AQ9H0A3 160 aa13.66□□□□□ -0.22
HERC6-205ENST00000504905 TRBV6-8A0A0A6YYG3 113 aa13.65□□□□□ -0.22
HERC6-205ENST00000504905 NFE4Q86UQ8 179 aa13.65□□□□□ -0.22
HERC6-205ENST00000504905 SEC11CQ9BY50 192 aa13.65□□□□□ -0.22
HERC6-205ENST00000504905 URGCP-MRPS24S4R325 110 aa13.65□□□□□ -0.22
HERC6-205ENST00000504905 ADCYAP1P18509 176 aa13.64□□□□□ -0.23
HERC6-205ENST00000504905 TNP2Q05952 138 aa13.64□□□□□ -0.23
HERC6-205ENST00000504905 FRZBQ92765 325 aa13.64□□□□□ -0.23
HERC6-205ENST00000504905 MT-ND4LP03901 98 aa13.63□□□□□ -0.23
HERC6-205ENST00000504905 NDUFA5Q16718 116 aa13.63□□□□□ -0.23
HERC6-205ENST00000504905 KCNIP4Q6PIL6 250 aa13.63□□□□□ -0.23
HERC6-205ENST00000504905 NIT1Q86X76 327 aa13.63□□□□□ -0.23
HERC6-205ENST00000504905 Q8N3U1 123 aa13.63□□□□□ -0.23
HERC6-205ENST00000504905 IBA57-AS1B1ANH7 110 aa13.62□□□□□ -0.23
HERC6-205ENST00000504905 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
HERC6-205ENST00000504905 KRTAP4-5Q9BYR2 181 aa13.62□□□□□ -0.23
HERC6-205ENST00000504905 A0A087WX48 190 aa13.61□□□□□ -0.23
HERC6-205ENST00000504905 A0A1B0GW15 77 aa13.61□□□□□ -0.23
HERC6-205ENST00000504905 C10orf91Q5T1B1 145 aa13.61□□□□□ -0.23
HERC6-205ENST00000504905 Q6ZRN7 208 aaPredicted RBP13.61□□□□□ -0.23
HERC6-205ENST00000504905 NTM-AS1Q6ZSK4 140 aa13.61□□□□□ -0.23
HERC6-205ENST00000504905 AMN1Q8IY45 258 aa13.61□□□□□ -0.23
HERC6-205ENST00000504905 SLC7A5P1Q8MH63 180 aa13.61□□□□□ -0.23
HERC6-205ENST00000504905 RPL39LQ96EH5 51 aaKnown RBP13.61□□□□□ -0.23
HERC6-205ENST00000504905 CHCHD5Q9BSY4 110 aa13.61□□□□□ -0.23
HERC6-205ENST00000504905 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
HERC6-205ENST00000504905 TMEM262E9PQX1 116 aa13.6□□□□□ -0.23
HERC6-205ENST00000504905 RAB4AP20338 218 aa13.6□□□□□ -0.23
HERC6-205ENST00000504905 CAMPP49913 170 aa13.6□□□□□ -0.23
HERC6-205ENST00000504905 RNF185Q96GF1 192 aa13.6□□□□□ -0.23
HERC6-205ENST00000504905 CHCHD7Q9BUK0 85 aa13.6□□□□□ -0.23
HERC6-205ENST00000504905 IGHV1-24A0A0C4DH33 117 aa13.59□□□□□ -0.23
HERC6-205ENST00000504905 PKIAP61925 76 aa13.59□□□□□ -0.23
HERC6-205ENST00000504905 LAGE3Q14657 143 aa13.59□□□□□ -0.23
HERC6-205ENST00000504905 MRPL54Q6P161 138 aaKnown RBP13.59□□□□□ -0.23
HERC6-205ENST00000504905 MRAP2Q96G30 205 aa13.59□□□□□ -0.23
HERC6-205ENST00000504905 Q9HAA7 133 aa13.59□□□□□ -0.23
HERC6-205ENST00000504905 S100A8P05109 93 aa13.58□□□□□ -0.24
HERC6-205ENST00000504905 IQCJQ1A5X6 159 aa13.58□□□□□ -0.24
HERC6-205ENST00000504905 CARHSP1Q9Y2V2 147 aaKnown RBP13.58□□□□□ -0.24
HERC6-205ENST00000504905 HBBP68871 147 aa13.57□□□□□ -0.24
HERC6-205ENST00000504905 COTL1Q14019 142 aa13.57□□□□□ -0.24
HERC6-205ENST00000504905 GAS8-AS1O95177 125 aa13.56□□□□□ -0.24
HERC6-205ENST00000504905 ELOBQ15370 118 aa13.56□□□□□ -0.24
HERC6-205ENST00000504905 FAM104BQ5XKR9 115 aa13.56□□□□□ -0.24
HERC6-205ENST00000504905 KLK12Q9UKR0 248 aa13.56□□□□□ -0.24
HERC6-205ENST00000504905 TRAV8-3A0A0A6YYJ7 113 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 TRBV6-5A0A0K0K1A5 114 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 A0A1B0GXF2 115 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 SDHAF1A6NFY7 115 aa13.55□□□□□ -0.24
HERC6-205ENST00000504905 GAGE6Q13070 117 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms