RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SVBPQ8N300 66 aa3.4□□□□□ -1.86
LMNB1-208ENST00000504788 SYT8Q8NBV8 401 aa3.4□□□□□ -1.86
LMNB1-208ENST00000504788 AP1S3Q96PC3 154 aa3.4□□□□□ -1.86
LMNB1-208ENST00000504788 TRAV26-2A0A0B4J265 109 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 A0A0J9YY99 117 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 IGLL5B9A064 214 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 RHODO00212 210 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 SNAPINO95295 136 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 RPS10P46783 165 aaKnown RBP3.4□□□□□ -1.87
LMNB1-208ENST00000504788 TCTAP57738 103 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 RAB4BP61018 213 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 SSTP61278 116 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 TWIST1Q15672 202 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 ESRGQ1W209 222 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 FAM74A4Q5TZK3 123 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 FAM104BQ5XKR9 115 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 ATP5L2Q7Z4Y8 100 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 AMN1Q8IY45 258 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 NRACQ8N912 160 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 NEXN-AS1Q8NBZ9 246 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 TPPP3Q9BW30 176 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 KRTAP4-5Q9BYR2 181 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 MRPL18Q9H0U6 180 aaKnown RBP3.4□□□□□ -1.87
LMNB1-208ENST00000504788 DPH3P1Q9H4G8 78 aa3.4□□□□□ -1.87
LMNB1-208ENST00000504788 TRBV24-1A0A075B6N3 115 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 TRAV9-1A0A075B6T8 112 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 TRBV10-1A0A0K0K1A3 114 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 LOC105371267A0A1B0GV96 52 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 PHOX2AO14813 284 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 TRGC1P0CF51 173 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 HTN3P15516 51 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 UBE2D3P61077 147 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 UBE2D2P62837 147 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 SLAQ13239 276 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 RHOHQ15669 191 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 MRPL54Q6P161 138 aaKnown RBP3.39□□□□□ -1.87
LMNB1-208ENST00000504788 TMEM136Q6ZRR5 245 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 NTM-AS1Q6ZSK4 140 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 C15orf53Q8NAA6 179 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 LINC00476Q8WZB0 136 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 FRZBQ92765 325 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 LINC00588Q9Y4M8 146 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 DNAH11Q96DT5 4516 aa3.39□□□□□ -1.87
LMNB1-208ENST00000504788 PKD1P98161 4303 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 TRGV4A0A0C4DH28 118 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 TRBV6-5A0A0K0K1A5 114 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 GYPEP15421 78 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 POLR2KP53803 58 aaKnown RBP3.38□□□□□ -1.87
LMNB1-208ENST00000504788 TIRAPP58753 221 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 HBBP68871 147 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 MRPL51Q4U2R6 128 aaKnown RBP3.38□□□□□ -1.87
LMNB1-208ENST00000504788 RASL11AQ6T310 242 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 LYPD5Q6UWN5 251 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 CBLN2Q8IUK8 224 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 RPL39LQ96EH5 51 aaKnown RBP3.38□□□□□ -1.87
LMNB1-208ENST00000504788 BTF3L4Q96K17 158 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 UPK3BQ9BT76 320 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 RPS10P5Q9NQ39 176 aa3.38□□□□□ -1.87
LMNB1-208ENST00000504788 IGLV2-18A0A075B6J9 118 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 TRBV7-3A0A075B6L6 115 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 TGIF2-C20orf24A0A0A6YYL0 155 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 A0A1B0GW15 77 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 PRSS47A8MTI9 375 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 CAMPP49913 170 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 RIGQ13278 110 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 ANKRD39Q53RE8 183 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 LGALS9CQ6DKI2 356 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 ZNRF2Q8NHG8 242 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 NIT2Q9NQR4 276 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 KLK5Q9Y337 293 aaPredicted RBP3.37□□□□□ -1.87
LMNB1-208ENST00000504788 URGCP-MRPS24S4R325 110 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 EPPK1P58107 5090 aaKnown RBP3.37□□□□□ -1.87
LMNB1-208ENST00000504788 LCE6AA0A183 80 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 COLCA2A8K830 154 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 SMKR1H3BMG3 65 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 SCO1O75880 301 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 ZNF56Q15929 161 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 MRPL23Q16540 153 aaKnown RBP3.37□□□□□ -1.87
LMNB1-208ENST00000504788 Q6ZR54 194 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 FAM104AQ969W3 186 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 TMEM70Q9BUB7 260 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 GNB1LQ9BYB4 327 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 ICOSQ9Y6W8 199 aa3.37□□□□□ -1.87
LMNB1-208ENST00000504788 TRBV27A0A0K0K1C4 114 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 GAGE12JA6NER3 117 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 NCR2O95944 276 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 NPYP01303 97 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 RPL32P62910 135 aaKnown RBP3.36□□□□□ -1.87
LMNB1-208ENST00000504788 GAGE1Q13065 139 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 GAGE4Q13068 117 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 GAGE5Q13069 117 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 GAGE13Q4V321 117 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 NEGR1Q7Z3B1 354 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 MRAP2Q96G30 205 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 DNAJC30Q96LL9 226 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 MRPS16Q9Y3D3 137 aaKnown RBP3.36□□□□□ -1.87
LMNB1-208ENST00000504788 DNAH5Q8TE73 4624 aa3.36□□□□□ -1.87
LMNB1-208ENST00000504788 PKHD1P08F94 4074 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms