RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 KALRNO60229 2985 aa13.34□□□□□ -0.27
POLR2J3-209ENST00000504157 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
POLR2J3-209ENST00000504157 EEF1AKMT3Q96AZ1 226 aa13.34□□□□□ -0.27
POLR2J3-209ENST00000504157 CLEC19AQ6UXS0 136 aa13.33□□□□□ -0.27
POLR2J3-209ENST00000504157 LITAFQ99732 161 aa13.33□□□□□ -0.27
POLR2J3-209ENST00000504157 LINC00527Q9UJ94 153 aa13.33□□□□□ -0.27
POLR2J3-209ENST00000504157 KLK5Q9Y337 293 aaPredicted RBP13.33□□□□□ -0.27
POLR2J3-209ENST00000504157 KIF25-AS1Q9Y6Z4 181 aa13.33□□□□□ -0.27
POLR2J3-209ENST00000504157 PKDREJQ9NTG1 2253 aa13.33□□□□□ -0.28
POLR2J3-209ENST00000504157 TPRP12270 2363 aaKnown RBP13.33□□□□□ -0.28
POLR2J3-209ENST00000504157 LINC00315P59091 139 aa13.33□□□□□ -0.28
POLR2J3-209ENST00000504157 OR13C6PQ8NH95 151 aa13.33□□□□□ -0.28
POLR2J3-209ENST00000504157 CLEC2BQ92478 149 aa13.33□□□□□ -0.28
POLR2J3-209ENST00000504157 FAM19A4Q96LR4 140 aa13.33□□□□□ -0.28
POLR2J3-209ENST00000504157 ZNF256Q9Y2P7 627 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-209ENST00000504157 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 OVOL1O14753 267 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 C20orf173Q96LM9 149 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 IGHV3OR16-13A0A075B7E8 117 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 IGHV3-74A0A0B4J1X5 117 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 IGHV1-69P01742 117 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 IGF1P05019 195 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 CRYGAP11844 174 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 COX7CP15954 63 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 SDIM1Q6ZPB5 146 aa13.32□□□□□ -0.28
POLR2J3-209ENST00000504157 PIEZO2Q9H5I5 2752 aa13.31□□□□□ -0.28
POLR2J3-209ENST00000504157 SMCR5Q8TEV8 140 aa13.31□□□□□ -0.28
POLR2J3-209ENST00000504157 RNASE3P12724 160 aaKnown RBP13.31□□□□□ -0.28
POLR2J3-209ENST00000504157 UBTD1Q9HAC8 227 aa13.31□□□□□ -0.28
POLR2J3-209ENST00000504157 ACACBO00763 2458 aa13.3□□□□□ -0.28
POLR2J3-209ENST00000504157 CXCL5P42830 114 aa13.3□□□□□ -0.28
POLR2J3-209ENST00000504157 ECSCRQ19T08 205 aa13.3□□□□□ -0.28
POLR2J3-209ENST00000504157 C5orf38Q86SI9 138 aa13.3□□□□□ -0.28
POLR2J3-209ENST00000504157 ATP6V0E1O15342 81 aa13.29□□□□□ -0.28
POLR2J3-209ENST00000504157 I3L3M4 83 aa13.29□□□□□ -0.28
POLR2J3-209ENST00000504157 GAGE2AQ6NT46 116 aa13.29□□□□□ -0.28
POLR2J3-209ENST00000504157 DCANP1Q8TF63 244 aa13.29□□□□□ -0.28
POLR2J3-209ENST00000504157 C2orf48Q96LS8 159 aa13.29□□□□□ -0.28
POLR2J3-209ENST00000504157 IGHV3-49A0A0A0MS15 119 aa13.28□□□□□ -0.28
POLR2J3-209ENST00000504157 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
POLR2J3-209ENST00000504157 IGHV3-64A0A075B6Q5 118 aa13.28□□□□□ -0.28
POLR2J3-209ENST00000504157 TRBV6-5A0A0K0K1A5 114 aa13.28□□□□□ -0.28
POLR2J3-209ENST00000504157 SOCS3O14543 225 aa13.28□□□□□ -0.28
POLR2J3-209ENST00000504157 BSNQ9UPA5 3926 aa13.27□□□□□ -0.28
POLR2J3-209ENST00000504157 DEFB104AQ8WTQ1 72 aa13.27□□□□□ -0.28
POLR2J3-209ENST00000504157 EDA2RQ9HAV5 297 aa13.27□□□□□ -0.28
POLR2J3-209ENST00000504157 PRSS2P07478 247 aa13.27□□□□□ -0.29
POLR2J3-209ENST00000504157 SUMO4Q6EEV6 95 aa13.27□□□□□ -0.29
POLR2J3-209ENST00000504157 TRAV8-3A0A0A6YYJ7 113 aa13.26□□□□□ -0.29
POLR2J3-209ENST00000504157 MAP1BP46821 2468 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-209ENST00000504157 TMEM61Q8N0U2 210 aa13.25□□□□□ -0.29
POLR2J3-209ENST00000504157 GNRH2O43555 120 aa13.25□□□□□ -0.29
POLR2J3-209ENST00000504157 IGHV3-30-3P0DP02 117 aa13.25□□□□□ -0.29
POLR2J3-209ENST00000504157 ADAMTSL4-AS1Q5T5F5 129 aa13.25□□□□□ -0.29
POLR2J3-209ENST00000504157 OPRPNQ99935 248 aaPredicted RBP13.25□□□□□ -0.29
POLR2J3-209ENST00000504157 ZNF580Q9UK33 172 aa13.25□□□□□ -0.29
POLR2J3-209ENST00000504157 WNK2Q9Y3S1 2297 aa13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 HIST1H4AP62805 103 aaKnown RBP13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 MIAQ16674 131 aa13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 PF4V1P10720 104 aa13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 RNASE4P34096 147 aaKnown RBP13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 RHOHQ15669 191 aa13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 Q6ZSV7 163 aa13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 PRORYQ9H606 182 aa13.24□□□□□ -0.29
POLR2J3-209ENST00000504157 PKD1L2Q7Z442 2459 aa13.23□□□□□ -0.29
POLR2J3-209ENST00000504157 ITPR1Q14643 2758 aa13.23□□□□□ -0.29
POLR2J3-209ENST00000504157 A0A0J9YXV3 536 aa13.23□□□□□ -0.29
POLR2J3-209ENST00000504157 PEMTQ9UBM1 199 aa13.23□□□□□ -0.29
POLR2J3-209ENST00000504157 G3V318 75 aa13.22□□□□□ -0.29
POLR2J3-209ENST00000504157 TIMM21Q9BVV7 248 aa13.22□□□□□ -0.29
POLR2J3-209ENST00000504157 RP1L1Q8IWN7 2480 aaPredicted RBP13.22□□□□□ -0.29
POLR2J3-209ENST00000504157 ARHGAP32A7KAX9 2087 aa13.21□□□□□ -0.29
POLR2J3-209ENST00000504157 FAM223BA6NKX1 122 aa13.21□□□□□ -0.29
POLR2J3-209ENST00000504157 ADARB2-AS1A8MUL3 147 aa13.21□□□□□ -0.29
POLR2J3-209ENST00000504157 ATOX1O00244 68 aa13.21□□□□□ -0.29
POLR2J3-209ENST00000504157 FAM223AQ8IWN6 122 aa13.21□□□□□ -0.29
POLR2J3-209ENST00000504157 CITED2Q99967 270 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-209ENST00000504157 SIRPDQ9H106 197 aa13.21□□□□□ -0.29
POLR2J3-209ENST00000504157 MUC4Q99102 2169 aa13.21□□□□□ -0.3
POLR2J3-209ENST00000504157 TLN1Q9Y490 2541 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-209ENST00000504157 TRACP01848 142 aa13.2□□□□□ -0.3
POLR2J3-209ENST00000504157 TRAV41A0A0B4J266 112 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 KLLNB2CW77 178 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 Q8NA96 180 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 DUX5Q96PT3 197 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 hADV29S1A0JD25 119 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 NDUFA4O00483 81 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 LY6HO94772 140 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 TMEM258P61165 79 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 C19orf54Q5BKX5 351 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 DPH3Q96FX2 82 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 JPT2Q9H910 190 aa13.19□□□□□ -0.3
POLR2J3-209ENST00000504157 ATRXP46100 2492 aa13.18□□□□□ -0.3
POLR2J3-209ENST00000504157 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
POLR2J3-209ENST00000504157 C20orf203Q8NBC4 194 aa13.18□□□□□ -0.3
POLR2J3-209ENST00000504157 NDUFA12Q9UI09 145 aa13.18□□□□□ -0.3
POLR2J3-209ENST00000504157 F5H697 171 aa13.17□□□□□ -0.3
POLR2J3-209ENST00000504157 DAND5Q8N907 189 aa13.17□□□□□ -0.3
POLR2J3-209ENST00000504157 LINC01560Q8TB33 94 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms