RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 LEPP41159 167 aa7.29□□□□□ -1.24
PDLIM5-207ENST00000503974 FXYD7P58549 80 aa7.29□□□□□ -1.24
PDLIM5-207ENST00000503974 BRD3OSQ6XYD6 125 aa7.29□□□□□ -1.24
PDLIM5-207ENST00000503974 ZNRD1Q9P1U0 126 aa7.29□□□□□ -1.24
PDLIM5-207ENST00000503974 AMMECR1Q9Y4X0 333 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-207ENST00000503974 SONP18583 2426 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-207ENST00000503974 ANK3Q12955 4377 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 FN1P02751 2386 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 IGHV3OR16-10A0A075B7F0 116 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 SMIM26A0A096LP01 95 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 LOC389332A0A1B0GUA5 103 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 DPM3Q9P2X0 92 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 NAV3Q8IVL0 2385 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 ATXN8Q156A1 80 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 NSUN5P1Q3KNT7 163 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 SDIM1Q6ZPB5 146 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 FP248Q71RG6 208 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 WFDC3Q8IUB2 231 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 METTL26Q96S19 204 aa7.28□□□□□ -1.24
PDLIM5-207ENST00000503974 ZNF833PQ6ZTB9 187 aa7.27□□□□□ -1.25
PDLIM5-207ENST00000503974 SVEP1Q4LDE5 3571 aa7.27□□□□□ -1.25
PDLIM5-207ENST00000503974 PRSS46E5RG02 174 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 UPK2O00526 184 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 PROP1O75360 226 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 P01737 135 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 PRSS1P07477 247 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 CFC1BP0CG36 223 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 CFC1P0CG37 223 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 SAA2P0DJI9 122 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 RIGQ13278 110 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 LINC00322Q6ZN03 302 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 DYNAPQ8N1N2 210 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 PRR20EP86478 221 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 PRR20CP86479 221 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 PRR20DP86480 221 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 PRR20BP86481 221 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 PRR20AP86496 221 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 RPL18AQ02543 176 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 Q8N8P6 123 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 SMCR5Q8TEV8 140 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 PRO1854Q9UHT4 67 aa7.26□□□□□ -1.25
PDLIM5-207ENST00000503974 TRAV26-2A0A0B4J265 109 aa7.25□□□□□ -1.25
PDLIM5-207ENST00000503974 LINC01546A6NGU7 62 aa7.25□□□□□ -1.25
PDLIM5-207ENST00000503974 EIF4EBP1Q13541 118 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-207ENST00000503974 DEFB112Q30KQ8 113 aa7.25□□□□□ -1.25
PDLIM5-207ENST00000503974 RNF182Q8N6D2 247 aa7.25□□□□□ -1.25
PDLIM5-207ENST00000503974 MTORP42345 2549 aa7.25□□□□□ -1.25
PDLIM5-207ENST00000503974 A0A1B0GUT8 65 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 TCRAP04437 139 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 C2orf82Q6UX34 121 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 Q6YL49 198 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 S1PR3Q99500 378 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 TRBV7-1A0A0A6YYK4 115 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 IGHV1-3A0A0C4DH29 117 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 RPL39P5Q59GN2 51 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 ZNF329Q86UD4 541 aa7.24□□□□□ -1.25
PDLIM5-207ENST00000503974 D6R8Y8 96 aa7.23□□□□□ -1.25
PDLIM5-207ENST00000503974 MRPL35Q9NZE8 188 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-207ENST00000503974 DUTP33316 252 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-207ENST00000503974 SPINK9Q5DT21 86 aa7.23□□□□□ -1.25
PDLIM5-207ENST00000503974 TEP1Q99973 2627 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-207ENST00000503974 H7C423 109 aa7.22□□□□□ -1.25
PDLIM5-207ENST00000503974 HILS1P60008 231 aa7.22□□□□□ -1.25
PDLIM5-207ENST00000503974 FHL2Q14192 279 aa7.22□□□□□ -1.25
PDLIM5-207ENST00000503974 FAM104BQ5XKR9 115 aa7.22□□□□□ -1.25
PDLIM5-207ENST00000503974 Q6ZRU5 148 aa7.22□□□□□ -1.25
PDLIM5-207ENST00000503974 ORMDL3Q8N138 153 aa7.22□□□□□ -1.25
PDLIM5-207ENST00000503974 MXRA5Q9NR99 2828 aa7.22□□□□□ -1.25
PDLIM5-207ENST00000503974 LINC00473A8K010 186 aa7.21□□□□□ -1.25
PDLIM5-207ENST00000503974 IGHV3-33P01772 117 aa7.21□□□□□ -1.25
PDLIM5-207ENST00000503974 ARMS2P0C7Q2 107 aa7.21□□□□□ -1.25
PDLIM5-207ENST00000503974 SYNJ2BPP57105 145 aa7.21□□□□□ -1.25
PDLIM5-207ENST00000503974 Q8N6K4 173 aa7.21□□□□□ -1.25
PDLIM5-207ENST00000503974 IGHV4-59P01825 116 aa7.21□□□□□ -1.26
PDLIM5-207ENST00000503974 PLNP26678 52 aa7.21□□□□□ -1.26
PDLIM5-207ENST00000503974 ESM1Q9NQ30 184 aa7.21□□□□□ -1.26
PDLIM5-207ENST00000503974 PEMTQ9UBM1 199 aa7.21□□□□□ -1.26
PDLIM5-207ENST00000503974 A6NDX4 124 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 DNAJC9-AS1A6NH13 148 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 H3BUX3 64 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 BRWD1-AS2P59051 145 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 LINC00205P59089 165 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 A0A0B4J2C4 111 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 ERCC8Q13216 396 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 PRR15Q8IV56 129 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 FAM167A-AS1Q96KT0 104 aa7.2□□□□□ -1.26
PDLIM5-207ENST00000503974 IGHV3-72A0A0B4J1Y9 119 aa7.19□□□□□ -1.26
PDLIM5-207ENST00000503974 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
PDLIM5-207ENST00000503974 RNASE1P07998 156 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-207ENST00000503974 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
PDLIM5-207ENST00000503974 MRPL53Q96EL3 112 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-207ENST00000503974 RNF5Q99942 180 aa7.19□□□□□ -1.26
PDLIM5-207ENST00000503974 KNCNA6PVL3 124 aa7.18□□□□□ -1.26
PDLIM5-207ENST00000503974 IGKV1-16P04430 117 aa7.18□□□□□ -1.26
PDLIM5-207ENST00000503974 TMEM190Q8WZ59 177 aa7.18□□□□□ -1.26
PDLIM5-207ENST00000503974 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
PDLIM5-207ENST00000503974 NDUFA3O95167 84 aa7.18□□□□□ -1.26
PDLIM5-207ENST00000503974 MRPL51Q4U2R6 128 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-207ENST00000503974 NPBQ8NG41 125 aa7.18□□□□□ -1.26
PDLIM5-207ENST00000503974 TMEM263Q8WUH6 116 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms