RNA–Protein interactions for RNA: ENST00000503204.1

CPNE4-203, Transcript of copine 4, humanhuman

TSL 2

Gene CPNE4, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-203ENST00000503204 C4orf51C9J302 202 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 HMGN4O00479 90 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 FSTL3O95633 263 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 LTAP01374 205 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 MGST1P10620 155 aaKnown RBP3.2□□□□□ -1.9
CPNE4-203ENST00000503204 NPPCP23582 126 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 EFNA4P52798 201 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 LINC00313P59037 77 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 ATP5EP2Q5VTU8 51 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 ZFP2Q6ZN57 461 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 PHF5AQ7RTV0 110 aaKnown RBP3.2□□□□□ -1.9
CPNE4-203ENST00000503204 LYZL2Q7Z4W2 148 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 PCP2Q8IVA1 136 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 OR8A1Q8NGG7 326 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 ZNF492Q9P255 531 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 CELA1Q9UNI1 258 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 HHLA3Q9XRX5 114 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 KLK5Q9Y337 293 aaPredicted RBP3.2□□□□□ -1.9
CPNE4-203ENST00000503204 MAP1BP46821 2468 aaKnown RBP3.2□□□□□ -1.9
CPNE4-203ENST00000503204 ABCA7Q8IZY2 2146 aa3.2□□□□□ -1.9
CPNE4-203ENST00000503204 NAV2Q8IVL1 2488 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 MED12LQ86YW9 2145 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 TRBV20OR9-2A0A075B6H5 130 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 IGHV1-45A0A0A0MS14 117 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 LOC107984156A0A0G2JMH3 177 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 LINC01546A6NGU7 62 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 LINC01549A6NIU2 74 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 IBA57-AS1B1ANH7 110 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 INAFM2P0DMQ5 153 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 IL9P15248 144 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 SLC25A16P16260 332 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 PLNP26678 52 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 IFI27P40305 119 aaPredicted RBP3.19□□□□□ -1.9
CPNE4-203ENST00000503204 KLKP1Q107X0 134 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 S100A7L2Q5SY68 101 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 NTM-AS1Q6ZSK4 140 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 WDR86Q86TI4 376 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 ARL17AQ8IVW1 177 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 CHCHD7Q9BUK0 85 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 CXCL16Q9H2A7 254 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 TENM4Q6N022 2769 aa3.19□□□□□ -1.9
CPNE4-203ENST00000503204 USP9XQ93008 2570 aaPredicted RBP3.18□□□□□ -1.9
CPNE4-203ENST00000503204 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.18□□□□□ -1.9
CPNE4-203ENST00000503204 TRBV30A0A0K0K1B3 111 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 TRBV10-3A0A0K0K1G6 114 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 IGLV3-25P01717 112 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 IGLV3-27P01718 113 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 COX6CP09669 75 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 ZNF823P16415 610 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 CKS2P33552 79 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 CMC4P56277 68 aaPredicted RBP3.18□□□□□ -1.9
CPNE4-203ENST00000503204 IGLV3-21P80748 117 aaPredicted RBP3.18□□□□□ -1.9
CPNE4-203ENST00000503204 FP248Q71RG6 208 aaPredicted RBP3.18□□□□□ -1.9
CPNE4-203ENST00000503204 TOMM6Q96B49 74 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 Q96M85 177 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 PRO1854Q9UHT4 67 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 DSPP15924 2871 aaKnown RBP3.18□□□□□ -1.9
CPNE4-203ENST00000503204 ITPR1Q14643 2758 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 GVINP1Q7Z2Y8 2422 aa3.18□□□□□ -1.9
CPNE4-203ENST00000503204 RIF1Q5UIP0 2472 aaKnown RBP3.17□□□□□ -1.9
CPNE4-203ENST00000503204 COL12A1Q99715 3063 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 IGHV3-49A0A0A0MS15 119 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 A0A0D9SEW6 157 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 K7ERJ3 54 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 M0R381 172 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 CCKP06307 115 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 SNRPD3P62318 126 aaKnown RBP3.17□□□□□ -1.9
CPNE4-203ENST00000503204 UBE2BP63146 152 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 EIF4EBP1Q13541 118 aaPredicted RBP3.17□□□□□ -1.9
CPNE4-203ENST00000503204 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 LINC01590Q5TEZ4 76 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 Q6JHZ5 121 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 Q8N7P7 452 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 WFDC11Q8NEX6 87 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 DYNLRB2Q8TF09 96 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 DMXL2Q8TDJ6 3036 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 COL4A1P02462 1669 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 GREB1Q4ZG55 1949 aa3.17□□□□□ -1.9
CPNE4-203ENST00000503204 ZNF236Q9UL36 1845 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 NLRC5Q86WI3 1866 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 FREM2Q5SZK8 3169 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 TRAV13-2A0A0B4J235 113 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 H3BVH4 76 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 TIMM17BO60830 172 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 Q1T7F1 81 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 SP6Q3SY56 376 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 LCA10Q71F78 164 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 C3orf56Q8N813 242 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 KLK6Q92876 244 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 SPTSSAQ969W0 71 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 ZNF714Q96N38 554 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 SLC50A1Q9BRV3 221 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 NPCDR1Q9BY65 106 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 PSENENQ9NZ42 101 aa3.16□□□□□ -1.9
CPNE4-203ENST00000503204 MRPL35Q9NZE8 188 aaKnown RBP3.16□□□□□ -1.9
CPNE4-203ENST00000503204 TEP1Q99973 2627 aaKnown RBP3.16□□□□□ -1.9
CPNE4-203ENST00000503204 FAM208BQ5VWN6 2430 aa3.15□□□□□ -1.9
CPNE4-203ENST00000503204 ANAPC1Q9H1A4 1944 aa3.15□□□□□ -1.9
CPNE4-203ENST00000503204 ANKRD17O75179 2603 aaKnown RBP3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms