RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 DNAH10Q8IVF4 4471 aa17.12■□□□□ 0.33
LSM6-202ENST00000502781 TTC32Q5I0X7 151 aa17.12■□□□□ 0.33
LSM6-202ENST00000502781 ANAPC16Q96DE5 110 aa17.12■□□□□ 0.33
LSM6-202ENST00000502781 TMEM191AQ9H0A3 160 aa17.12■□□□□ 0.33
LSM6-202ENST00000502781 DNAH10OSP0CZ25 163 aa17.11■□□□□ 0.33
LSM6-202ENST00000502781 RIGQ13278 110 aa17.11■□□□□ 0.33
LSM6-202ENST00000502781 RASL11AQ6T310 242 aa17.11■□□□□ 0.33
LSM6-202ENST00000502781 DNAJC30Q96LL9 226 aa17.11■□□□□ 0.33
LSM6-202ENST00000502781 DNAH2Q9P225 4427 aa17.1■□□□□ 0.33
LSM6-202ENST00000502781 A0A087WWC5 75 aa17.1■□□□□ 0.33
LSM6-202ENST00000502781 MT-ND4LP03901 98 aa17.1■□□□□ 0.33
LSM6-202ENST00000502781 C10orf91Q5T1B1 145 aa17.1■□□□□ 0.33
LSM6-202ENST00000502781 TRAV8-6A0A0B4J262 113 aa17.09■□□□□ 0.33
LSM6-202ENST00000502781 GATD1Q8NB37 220 aa17.09■□□□□ 0.33
LSM6-202ENST00000502781 OR10J3Q5JRS4 329 aa17.08■□□□□ 0.32
LSM6-202ENST00000502781 FRZBQ92765 325 aa17.08■□□□□ 0.32
LSM6-202ENST00000502781 NIT2Q9NQR4 276 aa17.08■□□□□ 0.32
LSM6-202ENST00000502781 IGHV3-38A0A0C4DH36 116 aa17.07■□□□□ 0.32
LSM6-202ENST00000502781 TRAV26-2A0A0B4J265 109 aa17.06■□□□□ 0.32
LSM6-202ENST00000502781 A0A1B0GW15 77 aa17.06■□□□□ 0.32
LSM6-202ENST00000502781 K7EP13 123 aa17.06■□□□□ 0.32
LSM6-202ENST00000502781 LINC01556Q5JQF7 62 aa17.06■□□□□ 0.32
LSM6-202ENST00000502781 DAZ4Q86SG3 579 aaKnown RBP17.06■□□□□ 0.32
LSM6-202ENST00000502781 RNF185Q96GF1 192 aa17.06■□□□□ 0.32
LSM6-202ENST00000502781 DAZ3Q9NR90 486 aaKnown RBP17.06■□□□□ 0.32
LSM6-202ENST00000502781 TNFRSF18Q9Y5U5 241 aa17.06■□□□□ 0.32
LSM6-202ENST00000502781 RTL8CO15255 209 aa17.05■□□□□ 0.32
LSM6-202ENST00000502781 C1orf134Q5TEV5 83 aa17.05■□□□□ 0.32
LSM6-202ENST00000502781 CARHSP1Q9Y2V2 147 aaKnown RBP17.05■□□□□ 0.32
LSM6-202ENST00000502781 A0A1B0GXF2 115 aa17.04■□□□□ 0.32
LSM6-202ENST00000502781 BTF3P20290 206 aaKnown RBP17.04■□□□□ 0.32
LSM6-202ENST00000502781 RAB4AP20338 218 aa17.03■□□□□ 0.32
LSM6-202ENST00000502781 TRBV6-8A0A0A6YYG3 113 aa17.02■□□□□ 0.32
LSM6-202ENST00000502781 AMN1Q8IY45 258 aa17.02■□□□□ 0.32
LSM6-202ENST00000502781 C6orf223Q8N319 242 aa17.02■□□□□ 0.32
LSM6-202ENST00000502781 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.02■□□□□ 0.32
LSM6-202ENST00000502781 TRAV9-2A0A087WT02 112 aa17.02■□□□□ 0.31
LSM6-202ENST00000502781 MRPL54Q6P161 138 aaKnown RBP17.02■□□□□ 0.31
LSM6-202ENST00000502781 NTM-AS1Q6ZSK4 140 aa17.02■□□□□ 0.31
LSM6-202ENST00000502781 ATP5L2Q7Z4Y8 100 aa17.02■□□□□ 0.31
LSM6-202ENST00000502781 CAMPP49913 170 aa17.01■□□□□ 0.31
LSM6-202ENST00000502781 HBBP68871 147 aa17.01■□□□□ 0.31
LSM6-202ENST00000502781 TMEM97Q5BJF2 176 aa17.01■□□□□ 0.31
LSM6-202ENST00000502781 GAS8-AS1O95177 125 aa17■□□□□ 0.31
LSM6-202ENST00000502781 FAM104BQ5XKR9 115 aa17■□□□□ 0.31
LSM6-202ENST00000502781 RPL39LQ96EH5 51 aaKnown RBP17■□□□□ 0.31
LSM6-202ENST00000502781 MRAP2Q96G30 205 aa17■□□□□ 0.31
LSM6-202ENST00000502781 CTDSP1Q9GZU7 261 aa17■□□□□ 0.31
LSM6-202ENST00000502781 FRAS1Q86XX4 4008 aa16.99■□□□□ 0.31
LSM6-202ENST00000502781 DNAH17Q9UFH2 4485 aa16.99■□□□□ 0.31
LSM6-202ENST00000502781 TRBV6-5A0A0K0K1A5 114 aa16.99■□□□□ 0.31
LSM6-202ENST00000502781 S100A8P05109 93 aa16.99■□□□□ 0.31
LSM6-202ENST00000502781 LINC00336Q6ZUF6 198 aa16.99■□□□□ 0.31
LSM6-202ENST00000502781 C10orf126Q8N4M7 172 aa16.99■□□□□ 0.31
LSM6-202ENST00000502781 IMMP2LQ96T52 175 aa16.99■□□□□ 0.31
LSM6-202ENST00000502781 FAT2Q9NYQ8 4349 aa16.98■□□□□ 0.31
LSM6-202ENST00000502781 NIT1Q86X76 327 aa16.98■□□□□ 0.31
LSM6-202ENST00000502781 Q8N3U1 123 aa16.97■□□□□ 0.31
LSM6-202ENST00000502781 IQCJQ1A5X6 159 aa16.96■□□□□ 0.31
LSM6-202ENST00000502781 TMEM242Q9NWH2 141 aa16.96■□□□□ 0.31
LSM6-202ENST00000502781 IGHV3-30P01768 117 aa16.95■□□□□ 0.3
LSM6-202ENST00000502781 IGHV3-33P01772 117 aa16.95■□□□□ 0.3
LSM6-202ENST00000502781 IGHV3-30-3P0DP02 117 aa16.95■□□□□ 0.3
LSM6-202ENST00000502781 IGHV3-30-5P0DP03 117 aa16.95■□□□□ 0.3
LSM6-202ENST00000502781 MRPL51Q4U2R6 128 aaKnown RBP16.95■□□□□ 0.3
LSM6-202ENST00000502781 C7orf77A4D0Y5 90 aa16.94■□□□□ 0.3
LSM6-202ENST00000502781 SDHAF1A6NFY7 115 aa16.94■□□□□ 0.3
LSM6-202ENST00000502781 IBA57-AS1B1ANH7 110 aa16.94■□□□□ 0.3
LSM6-202ENST00000502781 RPS10P46783 165 aaKnown RBP16.94■□□□□ 0.3
LSM6-202ENST00000502781 Q6ZRN7 208 aaPredicted RBP16.94■□□□□ 0.3
LSM6-202ENST00000502781 CLRN3Q8NCR9 226 aa16.94■□□□□ 0.3
LSM6-202ENST00000502781 BTF3L4Q96K17 158 aa16.94■□□□□ 0.3
LSM6-202ENST00000502781 CHCHD7Q9BUK0 85 aa16.94■□□□□ 0.3
LSM6-202ENST00000502781 TRBV25-1A0A075B6N4 114 aa16.93■□□□□ 0.3
LSM6-202ENST00000502781 RHEBQ15382 184 aa16.93■□□□□ 0.3
LSM6-202ENST00000502781 KCNIP4Q6PIL6 250 aa16.93■□□□□ 0.3
LSM6-202ENST00000502781 NRACQ8N912 160 aa16.92■□□□□ 0.3
LSM6-202ENST00000502781 EPPK1P58107 5090 aaKnown RBP16.92■□□□□ 0.3
LSM6-202ENST00000502781 IGHV1-24A0A0C4DH33 117 aa16.91■□□□□ 0.3
LSM6-202ENST00000502781 SMKR1H3BMG3 65 aa16.91■□□□□ 0.3
LSM6-202ENST00000502781 PRSS29PA6NIE9 313 aa16.9■□□□□ 0.3
LSM6-202ENST00000502781 NCR2O95944 276 aa16.9■□□□□ 0.3
LSM6-202ENST00000502781 POLR2KP53803 58 aaKnown RBP16.9■□□□□ 0.3
LSM6-202ENST00000502781 COTL1Q14019 142 aa16.9■□□□□ 0.3
LSM6-202ENST00000502781 LAGE3Q14657 143 aa16.9■□□□□ 0.3
LSM6-202ENST00000502781 TMEM70Q9BUB7 260 aa16.9■□□□□ 0.3
LSM6-202ENST00000502781 ST20Q9HBF5 79 aa16.9■□□□□ 0.3
LSM6-202ENST00000502781 TRAV9-1A0A075B6T8 112 aa16.89■□□□□ 0.3
LSM6-202ENST00000502781 PPP1R17O96001 155 aa16.89■□□□□ 0.3
LSM6-202ENST00000502781 NFE4Q86UQ8 179 aa16.89■□□□□ 0.3
LSM6-202ENST00000502781 CHCHD5Q9BSY4 110 aa16.89■□□□□ 0.3
LSM6-202ENST00000502781 URGCP-MRPS24S4R325 110 aa16.89■□□□□ 0.3
LSM6-202ENST00000502781 A0A087WX48 190 aa16.89■□□□□ 0.29
LSM6-202ENST00000502781 APOC3P02656 99 aa16.89■□□□□ 0.29
LSM6-202ENST00000502781 PKIAP61925 76 aa16.88■□□□□ 0.29
LSM6-202ENST00000502781 DEFB104AQ8WTQ1 72 aa16.88■□□□□ 0.29
LSM6-202ENST00000502781 TRBV24-1A0A075B6N3 115 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 TRBV27A0A0K0K1C4 114 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 A0A1B0GVY2 172 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 I3L3M4 83 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms