RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TEX29Q8N6K0 151 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 OR10P1Q8NGE3 313 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 OR8B3Q8NGG8 313 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 RMI2Q96E14 147 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNF714Q96N38 554 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 AQP10Q96PS8 301 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 OR8B2Q96RD0 313 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 TCEAL7Q9BRU2 100 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 DERL1Q9BUN8 251 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 TTTY13Q9BZ97 58 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 NKX6-2Q9C056 277 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNF355PQ9NSJ1 428 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 MED9Q9NWA0 146 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 TNFSF18Q9UNG2 199 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 LINC00588Q9Y4M8 146 aa2.85□□□□□ -1.95
HMGB1P21-201ENST00000502313 PRKDCP78527 4128 aaKnown RBP2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 PKD1L1Q8TDX9 2849 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 IGKV1D-17A0A075B6S4 117 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 LOC107984640A0A0U1RRK4 108 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 FABP5P3A8MUU1 101 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 LEUTXA8MZ59 168 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 OOSP1A8MZH6 123 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 K7ERU9 68 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNF737O75373 536 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 DPM2O94777 84 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 GYPAP02724 150 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 MT-ND4LP03901 98 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 PRM2P04554 102 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 EVI2AP22794 236 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 TSPEAR-AS2P59090 65 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 VMA21Q3ZAQ7 101 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 Q6ZR03 302 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZNF818PQ6ZRF7 136 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 C9orf62Q8N4C0 152 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 LINC00311Q8N616 119 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 ZFAND2AQ8N6M9 145 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 OR2T10Q8NGZ9 312 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 C14orf144Q96I85 54 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 PRADC1Q9BSG0 188 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 NPVFQ9HCQ7 196 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 PSENENQ9NZ42 101 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 OR5AC2Q9NZP5 309 aa2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 KLK5Q9Y337 293 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P21-201ENST00000502313 ABCA1O95477 2261 aa2.84□□□□□ -1.96
HMGB1P21-201ENST00000502313 DNAH3Q8TD57 4116 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 CEBPZOSA8MTT3 80 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 LY6LH3BQJ8 138 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 TMEM256-PLSCR3K7ERE1 68 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 M0R1W7 72 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 M0R378 163 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 LECT2O14960 151 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 IFNA4P05014 189 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 COL8A2P25067 703 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 PSMB8P28062 276 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 SUPT4H1P63272 117 aaKnown RBP2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 RHOGP84095 191 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 KRTAP21-3Q3LHN1 58 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 KRTAP7-1Q8IUC3 87 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 LYG1Q8N1E2 194 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 MAPK1IP1LQ8NDC0 245 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 AP1S3Q96PC3 154 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 TXNDC17Q9BRA2 123 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 SLC39A9Q9NUM3 307 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 NAT8BQ9UHF3 227 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 MGAM2Q2M2H8 2515 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 ARFGEF3Q5TH69 2177 aa2.83□□□□□ -1.96
HMGB1P21-201ENST00000502313 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 VWFP04275 2813 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 IGKV3D-20A0A0C4DH25 116 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 C17orf98A8MV24 154 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 FNDC10F2Z333 226 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 CORTO00230 105 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 LEPROTO15243 131 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 PLXNB1O43157 2135 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 PITX3O75364 302 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 GAS8-AS1O95177 125 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 CFDP00746 253 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 CXCL1P09341 107 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 NPPCP23582 126 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 HLA-DMBP28068 263 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 MEF2BQ02080 365 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 DEFB113Q30KQ7 82 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 LINC01554Q52M75 96 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 NMSQ5H8A3 153 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 SPANXN5Q5MJ07 72 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 C10orf91Q5T1B1 145 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 MINOS1Q5TGZ0 78 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 MIR7-3HGQ8N6C7 128 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 HIST1H2BAQ96A08 127 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 TMEM133Q9H2Q1 129 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 C11orf1Q9H5F2 150 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 TUBA4BQ9H853 241 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 NAT8Q9UHE5 227 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 ICOSQ9Y6W8 199 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 MINOS1-NBL1R4GNA1 71 aa2.82□□□□□ -1.96
HMGB1P21-201ENST00000502313 MEGF8Q7Z7M0 2845 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 TRAV30A0A087WSZ9 112 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 A0A096LNJ9 63 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 H3BMM0 161 aa2.81□□□□□ -1.96
HMGB1P21-201ENST00000502313 PHOX2AO14813 284 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms