RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 REG3GQ6UW15 175 aa5.72□□□□□ -1.49
CCDC171-209ENST00000498725 NTM-AS1Q6ZSK4 140 aa5.72□□□□□ -1.49
CCDC171-209ENST00000498725 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.72□□□□□ -1.49
CCDC171-209ENST00000498725 PPP1R1CQ8WVI7 109 aa5.72□□□□□ -1.49
CCDC171-209ENST00000498725 MUC21A0A140T8X8 626 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 F5H697 171 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 STAG3L2P0CL84 134 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 STAG3L3P0CL85 134 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 CRIP1P50238 77 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 UBE2G2P60604 165 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 PKIAP61925 76 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 REG3AQ06141 175 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 Q86TA4 180 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 ZFP82Q8N141 532 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 STPG4Q8N801 248 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 RAB24Q969Q5 203 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 DERL1Q9BUN8 251 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 RBM38Q9H0Z9 239 aaKnown RBP5.71□□□□□ -1.5
CCDC171-209ENST00000498725 PRR34Q9NV39 138 aa5.71□□□□□ -1.5
CCDC171-209ENST00000498725 H2BFSP57053 126 aa5.7□□□□□ -1.5
CCDC171-209ENST00000498725 RAB4BP61018 213 aa5.7□□□□□ -1.5
CCDC171-209ENST00000498725 CYCSP99999 105 aaKnown RBP5.7□□□□□ -1.5
CCDC171-209ENST00000498725 DNLZQ5SXM8 178 aa5.7□□□□□ -1.5
CCDC171-209ENST00000498725 OR10G8Q8NGN5 311 aa5.7□□□□□ -1.5
CCDC171-209ENST00000498725 PRSS3P2Q8NHM4 247 aa5.7□□□□□ -1.5
CCDC171-209ENST00000498725 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
CCDC171-209ENST00000498725 LPAP08519 4548 aa5.7□□□□□ -1.5
CCDC171-209ENST00000498725 TRBV25-1A0A075B6N4 114 aa5.69□□□□□ -1.5
CCDC171-209ENST00000498725 MPC2O95563 127 aa5.69□□□□□ -1.5
CCDC171-209ENST00000498725 HIGD2BQ4VC39 106 aa5.69□□□□□ -1.5
CCDC171-209ENST00000498725 TMEM167BQ9NRX6 74 aa5.69□□□□□ -1.5
CCDC171-209ENST00000498725 IGKV3OR2-268A0A0C4DH90 116 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 TRBV6-1A0A0K0K1D8 114 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 PEX7O00628 323 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 CXorf1O96002 111 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 FAM162BQ5T6X4 162 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 MZT2BQ6NZ67 158 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 SPINK6Q6UWN8 80 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 OR10AG1Q8NH19 301 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 SUN5Q8TC36 379 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 GFRA4Q9GZZ7 299 aa5.68□□□□□ -1.5
CCDC171-209ENST00000498725 IGLV4-60A0A075B6I1 120 aa5.67□□□□□ -1.5
CCDC171-209ENST00000498725 A0A096LNI7 61 aa5.67□□□□□ -1.5
CCDC171-209ENST00000498725 IGHV1-24A0A0C4DH33 117 aa5.67□□□□□ -1.5
CCDC171-209ENST00000498725 NDUFS6O75380 124 aaKnown RBP5.67□□□□□ -1.5
CCDC171-209ENST00000498725 PET100P0DJ07 73 aa5.67□□□□□ -1.5
CCDC171-209ENST00000498725 RPS10P46783 165 aaKnown RBP5.67□□□□□ -1.5
CCDC171-209ENST00000498725 TMEM97Q5BJF2 176 aa5.67□□□□□ -1.5
CCDC171-209ENST00000498725 PRR27Q6MZM9 219 aa5.67□□□□□ -1.5
CCDC171-209ENST00000498725 C20orf203Q8NBC4 194 aa5.67□□□□□ -1.5
CCDC171-209ENST00000498725 ENKURQ8TC29 256 aa5.67□□□□□ -1.5
CCDC171-209ENST00000498725 TRAV8-4A0A0B4J246 113 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 GAGE12HA6NDE8 117 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 A6NHS1 94 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 H7C1H1 209 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 SSNA1O43805 119 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 P01737 135 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 SULT1A2P50226 295 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 UBE2G1P62253 170 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 C15orf56Q8N910 161 aa5.66□□□□□ -1.5
CCDC171-209ENST00000498725 ZNF471Q9BX82 626 aaPredicted RBP5.66□□□□□ -1.5
CCDC171-209ENST00000498725 ACTR3CQ9C0K3 210 aaPredicted RBP5.66□□□□□ -1.5
CCDC171-209ENST00000498725 A0A1W2PRE2 83 aa5.65□□□□□ -1.5
CCDC171-209ENST00000498725 MGPP08493 103 aa5.65□□□□□ -1.5
CCDC171-209ENST00000498725 ATP6V0CP27449 155 aa5.65□□□□□ -1.5
CCDC171-209ENST00000498725 ZNF674Q2M3X9 581 aa5.65□□□□□ -1.5
CCDC171-209ENST00000498725 SPANXN1Q5VSR9 72 aa5.65□□□□□ -1.5
CCDC171-209ENST00000498725 VAX2Q9UIW0 290 aa5.65□□□□□ -1.5
CCDC171-209ENST00000498725 SMIM17P0DL12 118 aa5.64□□□□□ -1.51
CCDC171-209ENST00000498725 SRSF9Q13242 221 aaKnown RBP eCLIP5.64□□□□□ -1.51
CCDC171-209ENST00000498725 IQCJQ1A5X6 159 aa5.64□□□□□ -1.51
CCDC171-209ENST00000498725 INO80EQ8NBZ0 244 aaPredicted RBP5.64□□□□□ -1.51
CCDC171-209ENST00000498725 AQP10Q96PS8 301 aa5.64□□□□□ -1.51
CCDC171-209ENST00000498725 TMEM243Q9BU79 118 aa5.64□□□□□ -1.51
CCDC171-209ENST00000498725 CCDC32Q9BV29 185 aa5.64□□□□□ -1.51
CCDC171-209ENST00000498725 ZFP30Q9Y2G7 519 aa5.64□□□□□ -1.51
CCDC171-209ENST00000498725 FAM74A7A6NL05 159 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 INMT-MINDY4F8WBC2 141 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 UBE2L6O14933 153 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 MBP02144 154 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 GZMBP10144 247 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 NKX2-5P52952 324 aaPredicted RBP5.63□□□□□ -1.51
CCDC171-209ENST00000498725 ZNF726P1Q15940 193 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 CFAP161Q6P656 301 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 Q6ZRP5 223 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 HIST1H2BAQ96A08 127 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 LINC00526Q96FQ7 95 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 FMC1Q96HJ9 113 aa5.63□□□□□ -1.51
CCDC171-209ENST00000498725 PSMG3Q9BT73 122 aaPredicted RBP5.63□□□□□ -1.51
CCDC171-209ENST00000498725 FAM231BA6NCW3 169 aa5.62□□□□□ -1.51
CCDC171-209ENST00000498725 CST9LP1Q5W188 147 aa5.62□□□□□ -1.51
CCDC171-209ENST00000498725 A0A1B0GUV1 79 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 LTAP01374 205 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 AKR1C3P42330 323 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 SERF2P84101 59 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 COX8CQ7Z4L0 72 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 PRR26Q8N8Z3 221 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 AP1S3Q96PC3 154 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 TPPP3Q9BW30 176 aa5.61□□□□□ -1.51
CCDC171-209ENST00000498725 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms