RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 POM121L12Q8N7R1 296 aa12.23□□□□□ -0.45
COL6A1-206ENST00000498614 PPP1R17O96001 155 aa12.23□□□□□ -0.45
COL6A1-206ENST00000498614 TCTEX1D4Q5JR98 221 aa12.23□□□□□ -0.45
COL6A1-206ENST00000498614 C10orf99Q6UWK7 81 aa12.23□□□□□ -0.45
COL6A1-206ENST00000498614 CREBBPQ92793 2442 aa12.23□□□□□ -0.45
COL6A1-206ENST00000498614 IGHV4-59P01825 116 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 APRG1Q8IVJ8 170 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 CARD19Q96LW7 228 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 ACANP16112 2415 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 MUC4Q99102 2169 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 NXPH4O95158 308 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 TCL1BO95988 128 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 DSCR9P59020 149 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 HERVK_113P61574 105 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 PMVKQ15126 192 aa12.22□□□□□ -0.45
COL6A1-206ENST00000498614 MYO9AB2RTY4 2548 aa12.21□□□□□ -0.45
COL6A1-206ENST00000498614 FLNAP21333 2647 aaKnown RBP12.21□□□□□ -0.45
COL6A1-206ENST00000498614 A0A096LNT2 108 aa12.21□□□□□ -0.45
COL6A1-206ENST00000498614 DEFB112Q30KQ8 113 aa12.21□□□□□ -0.45
COL6A1-206ENST00000498614 SUMO4Q6EEV6 95 aa12.21□□□□□ -0.45
COL6A1-206ENST00000498614 CFC1BP0CG36 223 aa12.21□□□□□ -0.46
COL6A1-206ENST00000498614 CFC1P0CG37 223 aa12.21□□□□□ -0.46
COL6A1-206ENST00000498614 POLR2KP53803 58 aaKnown RBP12.21□□□□□ -0.46
COL6A1-206ENST00000498614 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 A0A087WW49 117 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 TGFAP01135 160 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 IGHV3-30P01768 117 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 MT-ATP8P03928 68 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 A0A087WWL8 130 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 PAPPA-AS1Q5QFB9 102 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 TMEM170BQ5T4T1 132 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 LRRC75A-AS1Q8N1F1 130 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 ZNRF2Q8NHG8 242 aa12.2□□□□□ -0.46
COL6A1-206ENST00000498614 CR1P17927 2039 aa12.19□□□□□ -0.46
COL6A1-206ENST00000498614 SPINK8P0C7L1 97 aa12.19□□□□□ -0.46
COL6A1-206ENST00000498614 RPL32P62910 135 aaKnown RBP12.19□□□□□ -0.46
COL6A1-206ENST00000498614 PSMB8P28062 276 aa12.19□□□□□ -0.46
COL6A1-206ENST00000498614 SLC25A29Q8N8R3 303 aa12.19□□□□□ -0.46
COL6A1-206ENST00000498614 CRYBA4P53673 196 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 XGP55808 180 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 LYRM7Q5U5X0 104 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 TEN1Q86WV5 123 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 PPDPFLQ8WWR9 84 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 TMEM141Q96I45 108 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 CLUHP3Q96NS8 147 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 AMELXQ99217 191 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 VCYO14598 125 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 DCANP1Q8TF63 244 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 CUBNO60494 3623 aa12.18□□□□□ -0.46
COL6A1-206ENST00000498614 F5H697 171 aa12.17□□□□□ -0.46
COL6A1-206ENST00000498614 K7EMT4 169 aa12.17□□□□□ -0.46
COL6A1-206ENST00000498614 Q6ZUT4 128 aa12.17□□□□□ -0.46
COL6A1-206ENST00000498614 SDHAF1A6NFY7 115 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 GATA3P23771 443 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 ID1P41134 155 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 TIMM17AQ99595 171 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 KIR2DL4Q99706 377 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 FAM159AQ6UWV7 190 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 LINC01356Q8N9X3 169 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 SVIPQ8NHG7 77 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 GEMIN7Q9H840 131 aaKnown RBP12.16□□□□□ -0.46
COL6A1-206ENST00000498614 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 BAHCC1Q9P281 2608 aa12.16□□□□□ -0.46
COL6A1-206ENST00000498614 SONP18583 2426 aaKnown RBP12.16□□□□□ -0.46
COL6A1-206ENST00000498614 TRBV20-1A0A075B6N2 111 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 TRBV7-9A0A0J9YWB2 115 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 KLLNB2CW77 178 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 J3QQQ9 107 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 TRAV12-3A0A0B4J271 114 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 A8MWV9 139 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 ZNF688P0C7X2 276 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 OPRPNQ99935 248 aaPredicted RBP12.15□□□□□ -0.46
COL6A1-206ENST00000498614 PRO1854Q9UHT4 67 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 MXRA5Q9NR99 2828 aa12.15□□□□□ -0.46
COL6A1-206ENST00000498614 TRAV26-1A0A087WT03 109 aa12.14□□□□□ -0.47
COL6A1-206ENST00000498614 IGKV3-20P01619 116 aa12.14□□□□□ -0.47
COL6A1-206ENST00000498614 SCGB1C2P0DMR2 95 aa12.14□□□□□ -0.47
COL6A1-206ENST00000498614 ANKRD29Q8N6D5 301 aa12.14□□□□□ -0.47
COL6A1-206ENST00000498614 ZNF256Q9Y2P7 627 aaPredicted RBP12.14□□□□□ -0.47
COL6A1-206ENST00000498614 IGHV4-31P0DP07 118 aa12.14□□□□□ -0.47
COL6A1-206ENST00000498614 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
COL6A1-206ENST00000498614 EIF4EBP3O60516 100 aaPredicted RBP12.13□□□□□ -0.47
COL6A1-206ENST00000498614 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
COL6A1-206ENST00000498614 FAM74A4Q5TZK3 123 aa12.13□□□□□ -0.47
COL6A1-206ENST00000498614 SETXQ7Z333 2677 aaKnown RBP12.13□□□□□ -0.47
COL6A1-206ENST00000498614 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
COL6A1-206ENST00000498614 ZNF580Q9UK33 172 aa12.13□□□□□ -0.47
COL6A1-206ENST00000498614 A4D1N5 150 aa12.12□□□□□ -0.47
COL6A1-206ENST00000498614 TRAV12-2A0A075B6T6 113 aa12.12□□□□□ -0.47
COL6A1-206ENST00000498614 LGALS9O00182 355 aa12.12□□□□□ -0.47
COL6A1-206ENST00000498614 DUX5Q96PT3 197 aa12.12□□□□□ -0.47
COL6A1-206ENST00000498614 SYNJ2BPP57105 145 aa12.11□□□□□ -0.47
COL6A1-206ENST00000498614 IGHV3-64A0A075B6Q5 118 aa12.11□□□□□ -0.47
COL6A1-206ENST00000498614 TRBV6-5A0A0K0K1A5 114 aa12.11□□□□□ -0.47
COL6A1-206ENST00000498614 TRPT1Q86TN4 253 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms