RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 NFE4Q86UQ8 179 aa7.98□□□□□ -1.13
MRPL55-234ENST00000497758 NEXN-AS1Q8NBZ9 246 aa7.98□□□□□ -1.13
MRPL55-234ENST00000497758 TSKUQ8WUA8 353 aa7.98□□□□□ -1.13
MRPL55-234ENST00000497758 CNFNQ9BYD5 112 aa7.98□□□□□ -1.13
MRPL55-234ENST00000497758 IGHV3-30P01768 117 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 IGHV3-33P01772 117 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 IGHV3-30-3P0DP02 117 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 IGHV3-30-5P0DP03 117 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 RPL23P62829 140 aaKnown RBP7.97□□□□□ -1.13
MRPL55-234ENST00000497758 TNP2Q05952 138 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 SUMO4Q6EEV6 95 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 ISOC2Q96AB3 205 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 GFRA4Q9GZZ7 299 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 TNFRSF18Q9Y5U5 241 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 URGCP-MRPS24S4R325 110 aa7.97□□□□□ -1.13
MRPL55-234ENST00000497758 FAM231BA6NCW3 169 aa7.96□□□□□ -1.14
MRPL55-234ENST00000497758 HIGD1CA8MV81 97 aa7.96□□□□□ -1.14
MRPL55-234ENST00000497758 M0QY20 66 aa7.96□□□□□ -1.14
MRPL55-234ENST00000497758 KCNIP4Q6PIL6 250 aa7.96□□□□□ -1.14
MRPL55-234ENST00000497758 A0A1B0GUT8 65 aa7.95□□□□□ -1.14
MRPL55-234ENST00000497758 A0A1B0GVY2 172 aa7.95□□□□□ -1.14
MRPL55-234ENST00000497758 FOXA3P55318 350 aaPredicted RBP7.95□□□□□ -1.14
MRPL55-234ENST00000497758 CLLU1Q5K131 121 aa7.95□□□□□ -1.14
MRPL55-234ENST00000497758 RASL11AQ6T310 242 aa7.95□□□□□ -1.14
MRPL55-234ENST00000497758 DAZ4Q86SG3 579 aaKnown RBP7.95□□□□□ -1.14
MRPL55-234ENST00000497758 DNAJC30Q96LL9 226 aa7.95□□□□□ -1.14
MRPL55-234ENST00000497758 DAZ3Q9NR90 486 aaKnown RBP7.95□□□□□ -1.14
MRPL55-234ENST00000497758 V9GYV3 84 aa7.95□□□□□ -1.14
MRPL55-234ENST00000497758 PKHD1P08F94 4074 aa7.95□□□□□ -1.14
MRPL55-234ENST00000497758 A0A087WX48 190 aa7.94□□□□□ -1.14
MRPL55-234ENST00000497758 TRBV6-8A0A0A6YYG3 113 aa7.94□□□□□ -1.14
MRPL55-234ENST00000497758 TMEM97Q5BJF2 176 aa7.94□□□□□ -1.14
MRPL55-234ENST00000497758 IBA57-AS1B1ANH7 110 aa7.93□□□□□ -1.14
MRPL55-234ENST00000497758 Q9HAA7 133 aa7.93□□□□□ -1.14
MRPL55-234ENST00000497758 NIT2Q9NQR4 276 aa7.93□□□□□ -1.14
MRPL55-234ENST00000497758 NAT8BQ9UHF3 227 aa7.93□□□□□ -1.14
MRPL55-234ENST00000497758 PKD1P98161 4303 aa7.93□□□□□ -1.14
MRPL55-234ENST00000497758 TRAV26-2A0A0B4J265 109 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 TMEM262E9PQX1 116 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 EREGO14944 169 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 PSCAO43653 123 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 PKIAP61925 76 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 RIGQ13278 110 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 LAGE3Q14657 143 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 Q6ZRN7 208 aaPredicted RBP7.92□□□□□ -1.14
MRPL55-234ENST00000497758 NIT1Q86X76 327 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 Q8N3U1 123 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 CHCHD5Q9BSY4 110 aa7.92□□□□□ -1.14
MRPL55-234ENST00000497758 TRBV25-1A0A075B6N4 114 aa7.91□□□□□ -1.14
MRPL55-234ENST00000497758 IFITM2Q01629 132 aa7.91□□□□□ -1.14
MRPL55-234ENST00000497758 ELOBQ15370 118 aa7.91□□□□□ -1.14
MRPL55-234ENST00000497758 GATD1Q8NB37 220 aa7.91□□□□□ -1.14
MRPL55-234ENST00000497758 FRZBQ92765 325 aa7.91□□□□□ -1.14
MRPL55-234ENST00000497758 CHCHD7Q9BUK0 85 aa7.91□□□□□ -1.14
MRPL55-234ENST00000497758 TRAV8-3A0A0A6YYJ7 113 aa7.9□□□□□ -1.14
MRPL55-234ENST00000497758 IGHV1-24A0A0C4DH33 117 aa7.9□□□□□ -1.14
MRPL55-234ENST00000497758 SMIM27A0A1W2PRY6 76 aa7.9□□□□□ -1.14
MRPL55-234ENST00000497758 PNRC1Q12796 327 aaPredicted RBP7.9□□□□□ -1.14
MRPL55-234ENST00000497758 TMEM191AQ9H0A3 160 aa7.9□□□□□ -1.14
MRPL55-234ENST00000497758 DNAH11Q96DT5 4516 aa7.9□□□□□ -1.15
MRPL55-234ENST00000497758 PPP1R2P9O14990 202 aa7.89□□□□□ -1.15
MRPL55-234ENST00000497758 COTL1Q14019 142 aa7.89□□□□□ -1.15
MRPL55-234ENST00000497758 TM2D2Q9BX73 214 aa7.89□□□□□ -1.15
MRPL55-234ENST00000497758 KLK12Q9UKR0 248 aa7.89□□□□□ -1.15
MRPL55-234ENST00000497758 A0A1B0GW15 77 aa7.88□□□□□ -1.15
MRPL55-234ENST00000497758 C16orf90A8MZG2 172 aa7.88□□□□□ -1.15
MRPL55-234ENST00000497758 IQCJQ1A5X6 159 aa7.88□□□□□ -1.15
MRPL55-234ENST00000497758 UQCC3Q6UW78 93 aa7.88□□□□□ -1.15
MRPL55-234ENST00000497758 NTM-AS1Q6ZSK4 140 aa7.88□□□□□ -1.15
MRPL55-234ENST00000497758 SPATA12Q7Z6I5 190 aa7.88□□□□□ -1.15
MRPL55-234ENST00000497758 RMI2Q96E14 147 aa7.88□□□□□ -1.15
MRPL55-234ENST00000497758 RPL39LQ96EH5 51 aaKnown RBP7.88□□□□□ -1.15
MRPL55-234ENST00000497758 TMEM243Q9BU79 118 aa7.88□□□□□ -1.15
MRPL55-234ENST00000497758 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
MRPL55-234ENST00000497758 UBE2L6O14933 153 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 CRPP02741 224 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 MT-ND4LP03901 98 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 S100A8P05109 93 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 CAMPP49913 170 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 GAGE6Q13070 117 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 MPV17L2Q567V2 206 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 AMN1Q8IY45 258 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 UBE2WQ96B02 151 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 MRAP2Q96G30 205 aa7.87□□□□□ -1.15
MRPL55-234ENST00000497758 A0A087WTM6 91 aa7.86□□□□□ -1.15
MRPL55-234ENST00000497758 ANGP03950 147 aaKnown RBP7.86□□□□□ -1.15
MRPL55-234ENST00000497758 RAB4AP20338 218 aa7.86□□□□□ -1.15
MRPL55-234ENST00000497758 AMTP48728 403 aa7.86□□□□□ -1.15
MRPL55-234ENST00000497758 Q0VG73 95 aa7.86□□□□□ -1.15
MRPL55-234ENST00000497758 MRPL54Q6P161 138 aaKnown RBP7.86□□□□□ -1.15
MRPL55-234ENST00000497758 COMMD7Q86VX2 200 aa7.86□□□□□ -1.15
MRPL55-234ENST00000497758 DEFB104AQ8WTQ1 72 aa7.86□□□□□ -1.15
MRPL55-234ENST00000497758 ST20Q9HBF5 79 aa7.86□□□□□ -1.15
MRPL55-234ENST00000497758 COX11Q9Y6N1 276 aa7.86□□□□□ -1.15
MRPL55-234ENST00000497758 IGKV2D-24A0A075B6R9 120 aa7.85□□□□□ -1.15
MRPL55-234ENST00000497758 SDHAF1A6NFY7 115 aa7.85□□□□□ -1.15
MRPL55-234ENST00000497758 F8W036 122 aa7.85□□□□□ -1.15
MRPL55-234ENST00000497758 RBX1P62877 108 aa7.85□□□□□ -1.15
MRPL55-234ENST00000497758 HBBP68871 147 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms