RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 VAX2Q9UIW0 290 aa13.85□□□□□ -0.19
CLIC4-204ENST00000497755 BORCS7-ASMTA0A0B4J1R7 106 aa13.84□□□□□ -0.19
CLIC4-204ENST00000497755 TMEM97Q5BJF2 176 aa13.84□□□□□ -0.19
CLIC4-204ENST00000497755 ZNF471Q9BX82 626 aaPredicted RBP13.84□□□□□ -0.19
CLIC4-204ENST00000497755 CNBPP62633 177 aaKnown RBP13.83□□□□□ -0.2
CLIC4-204ENST00000497755 INO80EQ8NBZ0 244 aaPredicted RBP13.83□□□□□ -0.2
CLIC4-204ENST00000497755 DERL1Q9BUN8 251 aa13.83□□□□□ -0.2
CLIC4-204ENST00000497755 SSBP4Q9BWG4 385 aaPredicted RBP13.83□□□□□ -0.2
CLIC4-204ENST00000497755 MUC21A0A0G2JKD1 596 aa13.82□□□□□ -0.2
CLIC4-204ENST00000497755 MUC21A0A140T8X8 626 aa13.82□□□□□ -0.2
CLIC4-204ENST00000497755 A6NHS1 94 aa13.82□□□□□ -0.2
CLIC4-204ENST00000497755 F5H697 171 aa13.82□□□□□ -0.2
CLIC4-204ENST00000497755 FHITP49789 147 aa13.82□□□□□ -0.2
CLIC4-204ENST00000497755 AKR1C8PQ5T2L2 129 aa13.82□□□□□ -0.2
CLIC4-204ENST00000497755 SNAI2O43623 268 aa13.81□□□□□ -0.2
CLIC4-204ENST00000497755 SLPIP03973 132 aa13.81□□□□□ -0.2
CLIC4-204ENST00000497755 CST9LP1Q5W188 147 aa13.81□□□□□ -0.2
CLIC4-204ENST00000497755 DPH3Q96FX2 82 aa13.81□□□□□ -0.2
CLIC4-204ENST00000497755 TCEAL7Q9BRU2 100 aa13.81□□□□□ -0.2
CLIC4-204ENST00000497755 KIF25-AS1Q9Y6Z4 181 aa13.81□□□□□ -0.2
CLIC4-204ENST00000497755 IGLV10-54A0A075B6I4 117 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 TRBV25-1A0A075B6N4 114 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 A0A087WYN8 130 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 MAP1LC3B2A6NCE7 125 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 CXCL1P09341 107 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 AKR1C3P42330 323 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 REG3AQ06141 175 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 MAP1LC3BQ9GZQ8 125 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 MED28Q9H204 178 aa13.8□□□□□ -0.2
CLIC4-204ENST00000497755 hDV102S1A0JD36 115 aa13.79□□□□□ -0.2
CLIC4-204ENST00000497755 CHTF8P0CG12 524 aa13.79□□□□□ -0.2
CLIC4-204ENST00000497755 SSTP61278 116 aa13.79□□□□□ -0.2
CLIC4-204ENST00000497755 IQCJQ1A5X6 159 aa13.79□□□□□ -0.2
CLIC4-204ENST00000497755 SPANXN1Q5VSR9 72 aa13.79□□□□□ -0.2
CLIC4-204ENST00000497755 IGHV3-64A0A075B6Q5 118 aa13.78□□□□□ -0.2
CLIC4-204ENST00000497755 OR5AL1P0C617 328 aa13.78□□□□□ -0.2
CLIC4-204ENST00000497755 RNF185Q96GF1 192 aa13.78□□□□□ -0.2
CLIC4-204ENST00000497755 MLST8Q9BVC4 326 aa13.78□□□□□ -0.2
CLIC4-204ENST00000497755 C20orf203Q8NBC4 194 aa13.77□□□□□ -0.21
CLIC4-204ENST00000497755 STOML3Q8TAV4 291 aa13.77□□□□□ -0.21
CLIC4-204ENST00000497755 FXYD6-FXYD2A0A087WZ82 144 aa13.76□□□□□ -0.21
CLIC4-204ENST00000497755 IGHV1-24A0A0C4DH33 117 aa13.76□□□□□ -0.21
CLIC4-204ENST00000497755 PAGE4O60829 102 aa13.76□□□□□ -0.21
CLIC4-204ENST00000497755 GIPP09681 153 aaPredicted RBP13.76□□□□□ -0.21
CLIC4-204ENST00000497755 SPACA4Q8TDM5 124 aa13.76□□□□□ -0.21
CLIC4-204ENST00000497755 TRAV8-4A0A0B4J246 113 aa13.75□□□□□ -0.21
CLIC4-204ENST00000497755 P01737 135 aa13.75□□□□□ -0.21
CLIC4-204ENST00000497755 S100A9P06702 114 aaKnown RBP13.74□□□□□ -0.21
CLIC4-204ENST00000497755 SMIM17P0DL12 118 aa13.74□□□□□ -0.21
CLIC4-204ENST00000497755 RAB5CP51148 216 aa13.74□□□□□ -0.21
CLIC4-204ENST00000497755 BAGE2Q86Y30 109 aa13.74□□□□□ -0.21
CLIC4-204ENST00000497755 GFRA4Q9GZZ7 299 aa13.74□□□□□ -0.21
CLIC4-204ENST00000497755 AP5S1Q9NUS5 200 aa13.74□□□□□ -0.21
CLIC4-204ENST00000497755 PLAC8Q9NZF1 115 aa13.74□□□□□ -0.21
CLIC4-204ENST00000497755 IGLV4-60A0A075B6I1 120 aa13.73□□□□□ -0.21
CLIC4-204ENST00000497755 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.73□□□□□ -0.21
CLIC4-204ENST00000497755 M0QY20 66 aa13.73□□□□□ -0.21
CLIC4-204ENST00000497755 PHOX2AO14813 284 aa13.73□□□□□ -0.21
CLIC4-204ENST00000497755 CYTL1Q9NRR1 136 aa13.73□□□□□ -0.21
CLIC4-204ENST00000497755 A0A1B0GUV1 79 aa13.72□□□□□ -0.21
CLIC4-204ENST00000497755 SCO2A0A1W2PP80 73 aa13.71□□□□□ -0.21
CLIC4-204ENST00000497755 LINC01600Q96MT4 127 aa13.71□□□□□ -0.21
CLIC4-204ENST00000497755 AP1S3Q96PC3 154 aa13.71□□□□□ -0.21
CLIC4-204ENST00000497755 DPH3P1Q9H4G8 78 aa13.71□□□□□ -0.21
CLIC4-204ENST00000497755 GZMBP10144 247 aa13.7□□□□□ -0.22
CLIC4-204ENST00000497755 ODF1Q14990 250 aa13.69□□□□□ -0.22
CLIC4-204ENST00000497755 TMEM243Q9BU79 118 aa13.69□□□□□ -0.22
CLIC4-204ENST00000497755 G3V3Q6 166 aa13.68□□□□□ -0.22
CLIC4-204ENST00000497755 SUMO4Q6EEV6 95 aa13.68□□□□□ -0.22
CLIC4-204ENST00000497755 C7orf33Q8WU49 177 aa13.68□□□□□ -0.22
CLIC4-204ENST00000497755 MGPP08493 103 aa13.67□□□□□ -0.22
CLIC4-204ENST00000497755 NKX2-5P52952 324 aaPredicted RBP13.67□□□□□ -0.22
CLIC4-204ENST00000497755 COX6A2Q02221 97 aa13.67□□□□□ -0.22
CLIC4-204ENST00000497755 TMUB2Q71RG4 321 aa13.67□□□□□ -0.22
CLIC4-204ENST00000497755 SFT2D1Q8WV19 159 aa13.67□□□□□ -0.22
CLIC4-204ENST00000497755 MBD3L1Q8WWY6 194 aa13.67□□□□□ -0.22
CLIC4-204ENST00000497755 H7C1H1 209 aa13.66□□□□□ -0.22
CLIC4-204ENST00000497755 C15orf56Q8N910 161 aa13.66□□□□□ -0.22
CLIC4-204ENST00000497755 A0A1B0GV50 99 aa13.65□□□□□ -0.22
CLIC4-204ENST00000497755 ARPC5O15511 151 aa13.64□□□□□ -0.23
CLIC4-204ENST00000497755 IGLC6P0CF74 106 aa13.64□□□□□ -0.23
CLIC4-204ENST00000497755 PRSS3P2Q8NHM4 247 aa13.64□□□□□ -0.23
CLIC4-204ENST00000497755 GTSF1Q8WW33 167 aa13.64□□□□□ -0.23
CLIC4-204ENST00000497755 TPPP3Q9BW30 176 aa13.64□□□□□ -0.23
CLIC4-204ENST00000497755 GAGE12HA6NDE8 117 aa13.63□□□□□ -0.23
CLIC4-204ENST00000497755 PFDN1O60925 122 aa13.63□□□□□ -0.23
CLIC4-204ENST00000497755 RPS10P46783 165 aaKnown RBP13.63□□□□□ -0.23
CLIC4-204ENST00000497755 PRR3P79522 188 aaKnown RBP13.63□□□□□ -0.23
CLIC4-204ENST00000497755 MAJINQ3KP22 176 aa13.63□□□□□ -0.23
CLIC4-204ENST00000497755 RASL11AQ6T310 242 aa13.63□□□□□ -0.23
CLIC4-204ENST00000497755 PGLYRP4Q96LB8 373 aa13.63□□□□□ -0.23
CLIC4-204ENST00000497755 NDUFS6O75380 124 aaKnown RBP13.62□□□□□ -0.23
CLIC4-204ENST00000497755 RPL35P42766 123 aaKnown RBP13.62□□□□□ -0.23
CLIC4-204ENST00000497755 SULT1A2P50226 295 aa13.62□□□□□ -0.23
CLIC4-204ENST00000497755 WDR73Q6P4I2 378 aa13.62□□□□□ -0.23
CLIC4-204ENST00000497755 CFAP161Q6P656 301 aa13.62□□□□□ -0.23
CLIC4-204ENST00000497755 FER1L6-AS1Q8NA97 138 aa13.62□□□□□ -0.23
CLIC4-204ENST00000497755 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
CLIC4-204ENST00000497755 KRTAP10-8P60410 259 aa13.61□□□□□ -0.23
CLIC4-204ENST00000497755 NIT2Q9NQR4 276 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms