RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 XGP55808 180 aa7.87□□□□□ -1.15
THBS3-208ENST00000496332 NTN5Q8WTR8 489 aaPredicted RBP7.87□□□□□ -1.15
THBS3-208ENST00000496332 AP1S3Q96PC3 154 aa7.87□□□□□ -1.15
THBS3-208ENST00000496332 BIN3Q9NQY0 253 aa7.87□□□□□ -1.15
THBS3-208ENST00000496332 TRBV6-8A0A0A6YYG3 113 aa7.86□□□□□ -1.15
THBS3-208ENST00000496332 XKRY2A2RUG3 117 aa7.86□□□□□ -1.15
THBS3-208ENST00000496332 CACNG7P62955 275 aa7.86□□□□□ -1.15
THBS3-208ENST00000496332 KCNIP4Q6PIL6 250 aa7.86□□□□□ -1.15
THBS3-208ENST00000496332 ALKAL2Q6UX46 152 aa7.86□□□□□ -1.15
THBS3-208ENST00000496332 DNAJC30Q96LL9 226 aa7.86□□□□□ -1.15
THBS3-208ENST00000496332 KLK12Q9UKR0 248 aa7.86□□□□□ -1.15
THBS3-208ENST00000496332 TMEM262E9PQX1 116 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 F2Z2F3 143 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 LECT2O14960 151 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 NKX2-5P52952 324 aaPredicted RBP7.85□□□□□ -1.15
THBS3-208ENST00000496332 BLOC1S1P78537 153 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 WFDC2Q14508 124 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 ELOBQ15370 118 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.85□□□□□ -1.15
THBS3-208ENST00000496332 NUDT10Q8NFP7 164 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 RMI2Q96E14 147 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 NUDT11Q96G61 164 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 CHCHD7Q9BUK0 85 aa7.85□□□□□ -1.15
THBS3-208ENST00000496332 IGKV2D-24A0A075B6R9 120 aa7.84□□□□□ -1.15
THBS3-208ENST00000496332 MGPP08493 103 aa7.84□□□□□ -1.15
THBS3-208ENST00000496332 LYZL1Q6UWQ5 148 aa7.84□□□□□ -1.15
THBS3-208ENST00000496332 OCC1Q8TAD7 63 aa7.84□□□□□ -1.15
THBS3-208ENST00000496332 BAALCQ8WXS3 180 aa7.84□□□□□ -1.15
THBS3-208ENST00000496332 UBE2WQ96B02 151 aa7.84□□□□□ -1.15
THBS3-208ENST00000496332 COX11Q9Y6N1 276 aa7.84□□□□□ -1.15
THBS3-208ENST00000496332 K7EN84 100 aa7.83□□□□□ -1.16
THBS3-208ENST00000496332 M0QY20 66 aa7.83□□□□□ -1.16
THBS3-208ENST00000496332 SUMO4Q6EEV6 95 aa7.83□□□□□ -1.16
THBS3-208ENST00000496332 NTM-AS1Q6ZSK4 140 aa7.83□□□□□ -1.16
THBS3-208ENST00000496332 CHCHD5Q9BSY4 110 aa7.83□□□□□ -1.16
THBS3-208ENST00000496332 RNASE7Q9H1E1 156 aaKnown RBP7.83□□□□□ -1.16
THBS3-208ENST00000496332 H7C1H1 209 aa7.82□□□□□ -1.16
THBS3-208ENST00000496332 NTF3P20783 257 aa7.82□□□□□ -1.16
THBS3-208ENST00000496332 MPV17L2Q567V2 206 aa7.82□□□□□ -1.16
THBS3-208ENST00000496332 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
THBS3-208ENST00000496332 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
THBS3-208ENST00000496332 RPP21Q9H633 154 aaKnown RBP7.82□□□□□ -1.16
THBS3-208ENST00000496332 EPM2AB3EWF7 344 aa7.81□□□□□ -1.16
THBS3-208ENST00000496332 TMEM250H0YL14 139 aa7.81□□□□□ -1.16
THBS3-208ENST00000496332 TRGC1P0CF51 173 aa7.81□□□□□ -1.16
THBS3-208ENST00000496332 Q0VG73 95 aa7.81□□□□□ -1.16
THBS3-208ENST00000496332 WDR73Q6P4I2 378 aa7.81□□□□□ -1.16
THBS3-208ENST00000496332 C15orf54Q8N8G6 183 aa7.81□□□□□ -1.16
THBS3-208ENST00000496332 TMEM70Q9BUB7 260 aa7.81□□□□□ -1.16
THBS3-208ENST00000496332 DPH3P1Q9H4G8 78 aa7.81□□□□□ -1.16
THBS3-208ENST00000496332 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
THBS3-208ENST00000496332 TRBV25-1A0A075B6N4 114 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 ANGP03950 147 aaKnown RBP7.8□□□□□ -1.16
THBS3-208ENST00000496332 CTRLP40313 264 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 CEBPGP53567 150 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 PKIAP61925 76 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 HAMPP81172 84 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 TWIST1Q15672 202 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 RASL11AQ6T310 242 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 ATRAIDQ6UW56 229 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 ENHOQ6UWT2 76 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 Q8N976 141 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
THBS3-208ENST00000496332 CRPP02741 224 aa7.79□□□□□ -1.16
THBS3-208ENST00000496332 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
THBS3-208ENST00000496332 GAGE6Q13070 117 aa7.79□□□□□ -1.16
THBS3-208ENST00000496332 CNFNQ9BYD5 112 aa7.79□□□□□ -1.16
THBS3-208ENST00000496332 EIF5A2Q9GZV4 153 aaKnown RBP7.79□□□□□ -1.16
THBS3-208ENST00000496332 IGHV1-24A0A0C4DH33 117 aa7.78□□□□□ -1.16
THBS3-208ENST00000496332 GATCO43716 136 aaKnown RBP7.78□□□□□ -1.16
THBS3-208ENST00000496332 RBX1P62877 108 aa7.78□□□□□ -1.16
THBS3-208ENST00000496332 IQCJQ1A5X6 159 aa7.78□□□□□ -1.16
THBS3-208ENST00000496332 GTSF1Q8WW33 167 aa7.78□□□□□ -1.16
THBS3-208ENST00000496332 FRZBQ92765 325 aa7.78□□□□□ -1.16
THBS3-208ENST00000496332 C1orf43Q9BWL3 253 aa7.78□□□□□ -1.16
THBS3-208ENST00000496332 NIT2Q9NQR4 276 aa7.78□□□□□ -1.16
THBS3-208ENST00000496332 FAM30AQ9NZY2 134 aa7.78□□□□□ -1.16
THBS3-208ENST00000496332 Q5VSD8 79 aa7.77□□□□□ -1.17
THBS3-208ENST00000496332 FAM231DQ6ZW35 169 aa7.77□□□□□ -1.17
THBS3-208ENST00000496332 A8MWL6 223 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 MIAQ16674 131 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 LINC01620Q4KN68 170 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 CLPSL2Q6UWE3 100 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 LINC00269Q8N2A0 174 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 GATD1Q8NB37 220 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 DEFB104AQ8WTQ1 72 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 FAM210AQ96ND0 272 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 SMIM7Q9BQ49 75 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 PRR34Q9NV39 138 aa7.76□□□□□ -1.17
THBS3-208ENST00000496332 TRAV26-2A0A0B4J265 109 aa7.75□□□□□ -1.17
THBS3-208ENST00000496332 FAM229AH3BQW9 127 aa7.75□□□□□ -1.17
THBS3-208ENST00000496332 NDUFS6O75380 124 aaKnown RBP7.75□□□□□ -1.17
THBS3-208ENST00000496332 FOXA3P55318 350 aaPredicted RBP7.75□□□□□ -1.17
THBS3-208ENST00000496332 SMIM15Q7Z3B0 74 aa7.75□□□□□ -1.17
THBS3-208ENST00000496332 PGLYRP4Q96LB8 373 aa7.75□□□□□ -1.17
THBS3-208ENST00000496332 TMEM243Q9BU79 118 aa7.75□□□□□ -1.17
THBS3-208ENST00000496332 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
THBS3-208ENST00000496332 HLA-DQA1P01909 254 aa7.74□□□□□ -1.17
THBS3-208ENST00000496332 SRP19P09132 144 aaKnown RBP7.74□□□□□ -1.17
THBS3-208ENST00000496332 INAFM2P0DMQ5 153 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms