RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 MBD3L1Q8WWY6 194 aa7.04□□□□□ -1.28
RFTN1-211ENST00000495666 TCEAL7Q9BRU2 100 aa7.04□□□□□ -1.28
RFTN1-211ENST00000495666 IGLV10-54A0A075B6I4 117 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 TRBV10-1A0A0K0K1A3 114 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 TRBV6-1A0A0K0K1D8 114 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 RAB19A4D1S5 217 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 ELOBQ15370 118 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 COX8CQ7Z4L0 72 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.03□□□□□ -1.28
RFTN1-211ENST00000495666 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 DAZAP1Q96EP5 407 aaKnown RBP7.03□□□□□ -1.28
RFTN1-211ENST00000495666 AP1S3Q96PC3 154 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 COX11Q9Y6N1 276 aa7.03□□□□□ -1.28
RFTN1-211ENST00000495666 S100A9P06702 114 aaKnown RBP7.02□□□□□ -1.29
RFTN1-211ENST00000495666 RAB5CP51148 216 aa7.02□□□□□ -1.29
RFTN1-211ENST00000495666 ENHOQ6UWT2 76 aa7.02□□□□□ -1.29
RFTN1-211ENST00000495666 HERC1Q15751 4861 aa7.02□□□□□ -1.29
RFTN1-211ENST00000495666 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 HMSDA8MTL9 139 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 SNAI2O43623 268 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
RFTN1-211ENST00000495666 GNG4P50150 75 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 NKX2-5P52952 324 aaPredicted RBP7.01□□□□□ -1.29
RFTN1-211ENST00000495666 EIF5AP63241 154 aaKnown RBP7.01□□□□□ -1.29
RFTN1-211ENST00000495666 ATRAIDQ6UW56 229 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 FER1L6-AS1Q8NA97 138 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 MANBALQ9NQG1 85 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 VPS13BQ7Z7G8 4022 aa7.01□□□□□ -1.29
RFTN1-211ENST00000495666 TRBV25-1A0A075B6N4 114 aa7□□□□□ -1.29
RFTN1-211ENST00000495666 IGKV3OR2-268A0A0C4DH90 116 aa7□□□□□ -1.29
RFTN1-211ENST00000495666 USP17L23D6RBM5 183 aa7□□□□□ -1.29
RFTN1-211ENST00000495666 Q0VG73 95 aa7□□□□□ -1.29
RFTN1-211ENST00000495666 NTM-AS1Q6ZSK4 140 aa7□□□□□ -1.29
RFTN1-211ENST00000495666 LINC00269Q8N2A0 174 aa7□□□□□ -1.29
RFTN1-211ENST00000495666 MED9Q9NWA0 146 aa7□□□□□ -1.29
RFTN1-211ENST00000495666 hCG_2014768A0A024R1R8 64 aa6.99□□□□□ -1.29
RFTN1-211ENST00000495666 OR5AL1P0C617 328 aa6.99□□□□□ -1.29
RFTN1-211ENST00000495666 CEBPGP53567 150 aa6.99□□□□□ -1.29
RFTN1-211ENST00000495666 RBX1P62877 108 aa6.99□□□□□ -1.29
RFTN1-211ENST00000495666 SUMO4Q6EEV6 95 aa6.99□□□□□ -1.29
RFTN1-211ENST00000495666 OR10G8Q8NGN5 311 aa6.99□□□□□ -1.29
RFTN1-211ENST00000495666 TEX46H3BTG2 121 aa6.98□□□□□ -1.29
RFTN1-211ENST00000495666 IFNA1P01562 189 aa6.98□□□□□ -1.29
RFTN1-211ENST00000495666 P01737 135 aa6.98□□□□□ -1.29
RFTN1-211ENST00000495666 LYZL1Q6UWQ5 148 aa6.98□□□□□ -1.29
RFTN1-211ENST00000495666 Q6ZSA8 131 aa6.98□□□□□ -1.29
RFTN1-211ENST00000495666 CIRBP-AS1Q8TBR5 109 aa6.98□□□□□ -1.29
RFTN1-211ENST00000495666 CHCHD7Q9BUK0 85 aa6.98□□□□□ -1.29
RFTN1-211ENST00000495666 DNAH8Q96JB1 4490 aa6.97□□□□□ -1.29
RFTN1-211ENST00000495666 TRAV26-2A0A0B4J265 109 aa6.97□□□□□ -1.29
RFTN1-211ENST00000495666 IGHV1-24A0A0C4DH33 117 aa6.97□□□□□ -1.29
RFTN1-211ENST00000495666 CXCL1P09341 107 aa6.97□□□□□ -1.29
RFTN1-211ENST00000495666 MEF2BQ02080 365 aaPredicted RBP6.97□□□□□ -1.29
RFTN1-211ENST00000495666 C14orf177Q52M58 125 aa6.97□□□□□ -1.29
RFTN1-211ENST00000495666 C11orf52Q96A22 123 aa6.97□□□□□ -1.29
RFTN1-211ENST00000495666 CHAC1Q9BUX1 264 aa6.97□□□□□ -1.29
RFTN1-211ENST00000495666 SSBP4Q9BWG4 385 aaPredicted RBP6.97□□□□□ -1.29
RFTN1-211ENST00000495666 KIF25-AS1Q9Y6Z4 181 aa6.97□□□□□ -1.29
RFTN1-211ENST00000495666 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
RFTN1-211ENST00000495666 H7C1H1 209 aa6.96□□□□□ -1.3
RFTN1-211ENST00000495666 UBE2L6O14933 153 aa6.96□□□□□ -1.3
RFTN1-211ENST00000495666 PRSS1P07477 247 aa6.96□□□□□ -1.3
RFTN1-211ENST00000495666 IGLC6P0CF74 106 aa6.96□□□□□ -1.3
RFTN1-211ENST00000495666 RPS20P60866 119 aaKnown RBP6.96□□□□□ -1.3
RFTN1-211ENST00000495666 REG3AQ06141 175 aa6.96□□□□□ -1.3
RFTN1-211ENST00000495666 TWIST1Q15672 202 aa6.96□□□□□ -1.3
RFTN1-211ENST00000495666 EIF5AL1Q6IS14 154 aaKnown RBP6.96□□□□□ -1.3
RFTN1-211ENST00000495666 RNASE7Q9H1E1 156 aaKnown RBP6.96□□□□□ -1.3
RFTN1-211ENST00000495666 IGLV4-60A0A075B6I1 120 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 hDV102S1A0JD36 115 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 XKRY2A2RUG3 117 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 M0QY20 66 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 TRGC1P0CF51 173 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 BCL2P10415 239 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 NTF3P20783 257 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 AMTP48728 403 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 SULT1A2P50226 295 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 CACNG7P62955 275 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 MIAQ16674 131 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 RASL11AQ6T310 242 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 TMEM243Q9BU79 118 aa6.95□□□□□ -1.3
RFTN1-211ENST00000495666 PDE6DO43924 150 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 RPL37AP61513 92 aaKnown RBP6.94□□□□□ -1.3
RFTN1-211ENST00000495666 PKIAP61925 76 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 TMEM97Q5BJF2 176 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 NUDT10Q8NFP7 164 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 DPH3Q96FX2 82 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 NUDT11Q96G61 164 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 GFRA4Q9GZZ7 299 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 DPH3P1Q9H4G8 78 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 VAX2Q9UIW0 290 aa6.94□□□□□ -1.3
RFTN1-211ENST00000495666 PANO1I0J062 215 aa6.93□□□□□ -1.3
RFTN1-211ENST00000495666 ALKAL2Q6UX46 152 aa6.93□□□□□ -1.3
RFTN1-211ENST00000495666 C20orf203Q8NBC4 194 aa6.93□□□□□ -1.3
RFTN1-211ENST00000495666 RPL39LQ96EH5 51 aaKnown RBP6.93□□□□□ -1.3
RFTN1-211ENST00000495666 RPP21Q9H633 154 aaKnown RBP6.93□□□□□ -1.3
RFTN1-211ENST00000495666 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
RFTN1-211ENST00000495666 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms