RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CAMPP49913 170 aa11.8□□□□□ -0.52
HDAC6-235ENST00000495515 HBBP68871 147 aa11.8□□□□□ -0.52
HDAC6-235ENST00000495515 RASL11AQ6T310 242 aa11.8□□□□□ -0.52
HDAC6-235ENST00000495515 NEXN-AS1Q8NBZ9 246 aa11.8□□□□□ -0.52
HDAC6-235ENST00000495515 GTSF1LQ9H1H1 148 aa11.8□□□□□ -0.52
HDAC6-235ENST00000495515 TMEM242Q9NWH2 141 aa11.8□□□□□ -0.52
HDAC6-235ENST00000495515 TNFRSF18Q9Y5U5 241 aa11.8□□□□□ -0.52
HDAC6-235ENST00000495515 C7orf77A4D0Y5 90 aa11.79□□□□□ -0.52
HDAC6-235ENST00000495515 SNAPINO95295 136 aa11.79□□□□□ -0.52
HDAC6-235ENST00000495515 MRPL54Q6P161 138 aaKnown RBP11.79□□□□□ -0.52
HDAC6-235ENST00000495515 BTF3L4Q96K17 158 aa11.79□□□□□ -0.52
HDAC6-235ENST00000495515 Q9UF83 564 aa11.79□□□□□ -0.52
HDAC6-235ENST00000495515 A0A087WWC5 75 aa11.78□□□□□ -0.52
HDAC6-235ENST00000495515 S100PP25815 95 aa11.78□□□□□ -0.52
HDAC6-235ENST00000495515 UBE2D3P61077 147 aa11.78□□□□□ -0.52
HDAC6-235ENST00000495515 UBE2D2P62837 147 aa11.78□□□□□ -0.52
HDAC6-235ENST00000495515 RPS10P5Q9NQ39 176 aa11.78□□□□□ -0.52
HDAC6-235ENST00000495515 NIT2Q9NQR4 276 aa11.78□□□□□ -0.52
HDAC6-235ENST00000495515 TRAV8-6A0A0B4J262 113 aa11.77□□□□□ -0.53
HDAC6-235ENST00000495515 SLC7A5P1Q8MH63 180 aa11.77□□□□□ -0.53
HDAC6-235ENST00000495515 MRAP2Q96G30 205 aa11.77□□□□□ -0.53
HDAC6-235ENST00000495515 Q9H8V8 135 aa11.77□□□□□ -0.53
HDAC6-235ENST00000495515 TRAV9-1A0A075B6T8 112 aa11.76□□□□□ -0.53
HDAC6-235ENST00000495515 A0A1B0GXF2 115 aa11.76□□□□□ -0.53
HDAC6-235ENST00000495515 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
HDAC6-235ENST00000495515 LELP1Q5T871 98 aa11.76□□□□□ -0.53
HDAC6-235ENST00000495515 DAZ4Q86SG3 579 aaKnown RBP11.76□□□□□ -0.53
HDAC6-235ENST00000495515 AMN1Q8IY45 258 aa11.76□□□□□ -0.53
HDAC6-235ENST00000495515 GATD1Q8NB37 220 aa11.76□□□□□ -0.53
HDAC6-235ENST00000495515 DAZ3Q9NR90 486 aaKnown RBP11.76□□□□□ -0.53
HDAC6-235ENST00000495515 TRAV26-2A0A0B4J265 109 aa11.75□□□□□ -0.53
HDAC6-235ENST00000495515 SIVA1O15304 175 aa11.75□□□□□ -0.53
HDAC6-235ENST00000495515 RAB4AP20338 218 aa11.75□□□□□ -0.53
HDAC6-235ENST00000495515 OR10J3Q5JRS4 329 aa11.75□□□□□ -0.53
HDAC6-235ENST00000495515 FAM104BQ5XKR9 115 aa11.75□□□□□ -0.53
HDAC6-235ENST00000495515 PPP1R17O96001 155 aa11.74□□□□□ -0.53
HDAC6-235ENST00000495515 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
HDAC6-235ENST00000495515 ALMS1Q8TCU4 4167 aa11.74□□□□□ -0.53
HDAC6-235ENST00000495515 IGLV2-18A0A075B6J9 118 aa11.73□□□□□ -0.53
HDAC6-235ENST00000495515 TTC32Q5I0X7 151 aa11.73□□□□□ -0.53
HDAC6-235ENST00000495515 LYSTQ99698 3801 aa11.72□□□□□ -0.53
HDAC6-235ENST00000495515 TRAV9-2A0A087WT02 112 aa11.71□□□□□ -0.53
HDAC6-235ENST00000495515 IGHV3-38A0A0C4DH36 116 aa11.71□□□□□ -0.53
HDAC6-235ENST00000495515 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
HDAC6-235ENST00000495515 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.53
HDAC6-235ENST00000495515 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
HDAC6-235ENST00000495515 NBDYA0A0U1RRE5 68 aa11.7□□□□□ -0.54
HDAC6-235ENST00000495515 K7EP13 123 aa11.7□□□□□ -0.54
HDAC6-235ENST00000495515 PPBPP02775 128 aa11.7□□□□□ -0.54
HDAC6-235ENST00000495515 CKS2P33552 79 aa11.7□□□□□ -0.54
HDAC6-235ENST00000495515 MRPL51Q4U2R6 128 aaKnown RBP11.7□□□□□ -0.54
HDAC6-235ENST00000495515 WFDC10BQ8IUB3 73 aa11.7□□□□□ -0.54
HDAC6-235ENST00000495515 ST20Q9HBF5 79 aa11.7□□□□□ -0.54
HDAC6-235ENST00000495515 HYDINQ4G0P3 5121 aa11.69□□□□□ -0.54
HDAC6-235ENST00000495515 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
HDAC6-235ENST00000495515 M0R2N4 97 aa11.69□□□□□ -0.54
HDAC6-235ENST00000495515 COX19Q49B96 90 aa11.69□□□□□ -0.54
HDAC6-235ENST00000495515 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
HDAC6-235ENST00000495515 SDHAF1A6NFY7 115 aa11.68□□□□□ -0.54
HDAC6-235ENST00000495515 NCR2O95944 276 aa11.68□□□□□ -0.54
HDAC6-235ENST00000495515 DNAH10OSP0CZ25 163 aa11.68□□□□□ -0.54
HDAC6-235ENST00000495515 COTL1Q14019 142 aa11.68□□□□□ -0.54
HDAC6-235ENST00000495515 TRBV25-1A0A075B6N4 114 aa11.67□□□□□ -0.54
HDAC6-235ENST00000495515 SMKR1H3BMG3 65 aa11.67□□□□□ -0.54
HDAC6-235ENST00000495515 PKIAP61925 76 aa11.67□□□□□ -0.54
HDAC6-235ENST00000495515 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
HDAC6-235ENST00000495515 Q6ZR54 194 aa11.67□□□□□ -0.54
HDAC6-235ENST00000495515 C10orf126Q8N4M7 172 aa11.67□□□□□ -0.54
HDAC6-235ENST00000495515 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
HDAC6-235ENST00000495515 D6R8Y8 96 aa11.66□□□□□ -0.54
HDAC6-235ENST00000495515 I3L3M4 83 aa11.66□□□□□ -0.54
HDAC6-235ENST00000495515 PMCHP20382 165 aa11.66□□□□□ -0.54
HDAC6-235ENST00000495515 RPS10P46783 165 aaKnown RBP11.66□□□□□ -0.54
HDAC6-235ENST00000495515 ORMDL3Q8N138 153 aa11.66□□□□□ -0.54
HDAC6-235ENST00000495515 PHOX2AO14813 284 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 GAS8-AS1O95177 125 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 HLA-DQA1P01909 254 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
HDAC6-235ENST00000495515 SUMO2P61956 95 aaKnown RBP11.65□□□□□ -0.54
HDAC6-235ENST00000495515 IQCJQ1A5X6 159 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 TMEM136Q6ZRR5 245 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 NRACQ8N912 160 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 C20orf78Q9BR46 151 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
HDAC6-235ENST00000495515 EPPK1P58107 5090 aaKnown RBP11.64□□□□□ -0.55
HDAC6-235ENST00000495515 TRBV24-1A0A075B6N3 115 aa11.64□□□□□ -0.55
HDAC6-235ENST00000495515 A0A087WX48 190 aa11.64□□□□□ -0.55
HDAC6-235ENST00000495515 VCYO14598 125 aa11.64□□□□□ -0.55
HDAC6-235ENST00000495515 AMTP48728 403 aa11.64□□□□□ -0.55
HDAC6-235ENST00000495515 NTM-AS1Q6ZSK4 140 aa11.64□□□□□ -0.55
HDAC6-235ENST00000495515 CHCHD7Q9BUK0 85 aa11.64□□□□□ -0.55
HDAC6-235ENST00000495515 GNB1LQ9BYB4 327 aa11.64□□□□□ -0.55
HDAC6-235ENST00000495515 LAMTOR2Q9Y2Q5 125 aa11.64□□□□□ -0.55
HDAC6-235ENST00000495515 TMEM262E9PQX1 116 aa11.63□□□□□ -0.55
HDAC6-235ENST00000495515 TNFRSF6BO95407 300 aa11.63□□□□□ -0.55
HDAC6-235ENST00000495515 MT-ND6P03923 174 aa11.63□□□□□ -0.55
HDAC6-235ENST00000495515 POLR2KP53803 58 aaKnown RBP11.63□□□□□ -0.55
HDAC6-235ENST00000495515 NIT1Q86X76 327 aa11.63□□□□□ -0.55
HDAC6-235ENST00000495515 PRELID3AQ96N28 172 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms