RNA–Protein interactions for RNA: ENST00000495426.1

BBS9-213, Transcript of Bardet-Biedl syndrome 9, human

TSL 3

Gene BBS9, Length 481 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-213	ENST00000495426	TCRB	P04435	133 aa		4.55	□□□□□ -1.68
BBS9-213	ENST00000495426	CLPSL2	Q6UWE3	100 aa		4.55	□□□□□ -1.68
BBS9-213	ENST00000495426	SDIM1	Q6ZPB5	146 aa		4.55	□□□□□ -1.68
BBS9-213	ENST00000495426	PSG8	Q9UQ74	426 aa		4.55	□□□□□ -1.68
BBS9-213	ENST00000495426		A0A087WYN8	130 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	TMEM262	E9PQX1	116 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426		K7EQM0	130 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	PHOX2A	O14813	284 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	TCRA	P04437	139 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	CHTF8	P0CG12	524 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	UBE2D3	P61077	147 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	UBE2D2	P62837	147 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	RPL24	P83731	157 aa	Known RBP	4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	RPL36A	P83881	106 aa	Known RBP	4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	FLI1	Q01543	452 aa	Predicted RBP	4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	MIA	Q16674	131 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	LRRC37A5P	Q49AS3	106 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	PRNT	Q86SH4	94 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	C5orf17	Q8NAS9	161 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	LINC01600	Q96MT4	127 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	KIF25-AS1	Q9Y6Z4	181 aa		4.54	□□□□□ -1.68
BBS9-213	ENST00000495426	IGKV3D-20	A0A0C4DH25	116 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	TRBV10-1	A0A0K0K1A3	114 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426		A0A1W2PPV4	95 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	HMGB3	O15347	200 aa	Known RBP	4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	PLA2G10	O15496	165 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	PTTG1	O95997	202 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	ARL14EPL	P0DKL9	152 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	RAB2A	P61019	212 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	OR11H4	Q8NGC9	324 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	SPACA4	Q8TDM5	124 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	C7orf33	Q8WU49	177 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	RNF185	Q96GF1	192 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	IL36B	Q9NZH7	164 aa		4.53	□□□□□ -1.68
BBS9-213	ENST00000495426	TRBV7-3	A0A075B6L6	115 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	IGHV3-64	A0A075B6Q5	118 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	TRBV6-8	A0A0A6YYG3	113 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426		A0A0J9YXV3	536 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426		A0A1B0GUV1	79 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426		B4DEV8	164 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	SIX6	O95475	246 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	CDC34	P49427	236 aa	Predicted RBP	4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	CNBP	P62633	177 aa	Known RBP	4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	PRR3	P79522	188 aa	Known RBP	4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	GAGE6	Q13070	117 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	KRTAP26-1	Q6PEX3	210 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	SCGB1C1	Q8TD33	95 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	CHCHD5	Q9BSY4	110 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	SMIM3	Q9BZL3	60 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	HSPB11	Q9Y547	144 aa		4.52	□□□□□ -1.69
BBS9-213	ENST00000495426	IGLV5-45	A0A087WSX0	123 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426		M0R036	132 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426		M0R381	172 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	ARMS2	P0C7Q2	107 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	PKIA	P61925	76 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	SAPCD1	Q5SSQ6	148 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	CST9LP1	Q5W188	147 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	DPH3	Q96FX2	82 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	SFRP2	Q96HF1	295 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	PRR34	Q9NV39	138 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	PLAC8	Q9NZF1	115 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	ARL2-SNX15	V9GYD0	113 aa		4.51	□□□□□ -1.69
BBS9-213	ENST00000495426	IGLV10-54	A0A075B6I4	117 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	TRAV34	A0A0B4J273	112 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	GRIFIN	A4D1Z8	144 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	FABP5P3	A8MUU1	101 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	TPT1	P13693	172 aa	Known RBP	4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	GCHFR	P30047	84 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	RBX1	P62877	108 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	PNRC1	Q12796	327 aa	Predicted RBP	4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	ZNF56	Q15929	161 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	DNLZ	Q5SXM8	178 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426		Q86TA4	180 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	LINC00269	Q8N2A0	174 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	OR10G8	Q8NGN5	311 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	PHLDA3	Q9Y5J5	127 aa		4.5	□□□□□ -1.69
BBS9-213	ENST00000495426	FAM240B	A0A1B0GVZ2	78 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	KRBOX1	C9JBD0	128 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	STAG3L2	P0CL84	134 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	STAG3L3	P0CL85	134 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	KRTAP10-8	P60410	259 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	REG3G	Q6UW15	175 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	ZFP82	Q8N141	532 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	PPP1R1C	Q8WVI7	109 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	GTSF1	Q8WW33	167 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	EPDR1	Q9UM22	224 aa		4.49	□□□□□ -1.69
BBS9-213	ENST00000495426	FAT4	Q6V0I7	4981 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	TMSB15B	A0A087X1C1	80 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	IGKV2-24	A0A0C4DH68	120 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	SH2D1A	O60880	128 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	PET100	P0DJ07	73 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	RPL12	P30050	165 aa	Known RBP	4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	CYCS	P99999	105 aa	Known RBP	4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	MAJIN	Q3KP22	176 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	NTM-AS1	Q6ZSK4	140 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	SUN5	Q8TC36	379 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	WFDC1	Q9HC57	220 aa		4.48	□□□□□ -1.69
BBS9-213	ENST00000495426	TMEM167B	Q9NRX6	74 aa		4.48	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms