RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FRZBQ92765 325 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 RPL36ALQ969Q0 106 aaKnown RBP6.36□□□□□ -1.39
MSH5-218ENST00000494646 DERL1Q9BUN8 251 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 FAM30AQ9NZY2 134 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.35□□□□□ -1.39
MSH5-218ENST00000494646 TRBV7-3A0A075B6L6 115 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 A0A087WX48 190 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 RAB19A4D1S5 217 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 F5H697 171 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 GZMBP10144 247 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 RAB4BP61018 213 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 UBE2D3P61077 147 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 UBE2D2P62837 147 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 SPANXN1Q5VSR9 72 aa6.35□□□□□ -1.39
MSH5-218ENST00000494646 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 RBFOX3A6NFN3 312 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 SNAI2O43623 268 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 LINC01620Q4KN68 170 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 KCNIP4Q6PIL6 250 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 NEXN-AS1Q8NBZ9 246 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 UBE2WQ96B02 151 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 TPPP3Q9BW30 176 aa6.34□□□□□ -1.39
MSH5-218ENST00000494646 SSBP4Q9BWG4 385 aaPredicted RBP6.34□□□□□ -1.39
MSH5-218ENST00000494646 IGLV2-8P01709 118 aa6.33□□□□□ -1.4
MSH5-218ENST00000494646 OR10G8Q8NGN5 311 aa6.33□□□□□ -1.4
MSH5-218ENST00000494646 DAZAP1Q96EP5 407 aaKnown RBP6.33□□□□□ -1.4
MSH5-218ENST00000494646 MANBALQ9NQG1 85 aa6.33□□□□□ -1.4
MSH5-218ENST00000494646 LRP1Q07954 4544 aaKnown RBP6.32□□□□□ -1.4
MSH5-218ENST00000494646 TRBV6-8A0A0A6YYG3 113 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 CXCL1P09341 107 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 OR5AL1P0C617 328 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 SMIM17P0DL12 118 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 SULT1A2P50226 295 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 ELOBQ15370 118 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 CENPWQ5EE01 88 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 RMI2Q96E14 147 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 TMEM70Q9BUB7 260 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 MED9Q9NWA0 146 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 COX11Q9Y6N1 276 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 KIF25-AS1Q9Y6Z4 181 aa6.32□□□□□ -1.4
MSH5-218ENST00000494646 TRAV1-1A0A0B4J248 108 aa6.31□□□□□ -1.4
MSH5-218ENST00000494646 TEX46H3BTG2 121 aa6.31□□□□□ -1.4
MSH5-218ENST00000494646 RAB5CP51148 216 aa6.31□□□□□ -1.4
MSH5-218ENST00000494646 EIF5AL1Q6IS14 154 aaKnown RBP6.31□□□□□ -1.4
MSH5-218ENST00000494646 ENHOQ6UWT2 76 aa6.31□□□□□ -1.4
MSH5-218ENST00000494646 C15orf54Q8N8G6 183 aa6.31□□□□□ -1.4
MSH5-218ENST00000494646 OR2D3Q8NGH3 330 aa6.31□□□□□ -1.4
MSH5-218ENST00000494646 C11orf52Q96A22 123 aa6.31□□□□□ -1.4
MSH5-218ENST00000494646 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
MSH5-218ENST00000494646 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
MSH5-218ENST00000494646 C19orf71A6NCJ1 209 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 MGPP08493 103 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 GNG4P50150 75 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 MEF2BQ02080 365 aaPredicted RBP6.3□□□□□ -1.4
MSH5-218ENST00000494646 GAGE6Q13070 117 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 MPV17L2Q567V2 206 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 ATRAIDQ6UW56 229 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 NTM-AS1Q6ZSK4 140 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 Q8N976 141 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.3□□□□□ -1.4
MSH5-218ENST00000494646 DEFB104AQ8WTQ1 72 aa6.3□□□□□ -1.4
MSH5-218ENST00000494646 C1QBP02746 253 aa6.29□□□□□ -1.4
MSH5-218ENST00000494646 ANGP03950 147 aaKnown RBP6.29□□□□□ -1.4
MSH5-218ENST00000494646 IGLC6P0CF74 106 aa6.29□□□□□ -1.4
MSH5-218ENST00000494646 RPS20P60866 119 aaKnown RBP6.29□□□□□ -1.4
MSH5-218ENST00000494646 Q0VG73 95 aa6.29□□□□□ -1.4
MSH5-218ENST00000494646 LYZL1Q6UWQ5 148 aa6.29□□□□□ -1.4
MSH5-218ENST00000494646 SLC51BQ86UW2 128 aa6.29□□□□□ -1.4
MSH5-218ENST00000494646 TCTE3Q8IZS6 198 aa6.29□□□□□ -1.4
MSH5-218ENST00000494646 FER1L6-AS1Q8NA97 138 aa6.29□□□□□ -1.4
MSH5-218ENST00000494646 CHCHD7Q9BUK0 85 aa6.29□□□□□ -1.4
MSH5-218ENST00000494646 TRBV20OR9-2A0A075B6H5 130 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 PDE6DO43924 150 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 IFNA1P01562 189 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 P01737 135 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 CRPP02741 224 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 NTF3P20783 257 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 CLPSL2Q6UWE3 100 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 AP1S3Q96PC3 154 aa6.28□□□□□ -1.4
MSH5-218ENST00000494646 TRBV25-1A0A075B6N4 114 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 M0QY20 66 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 BCL2P10415 239 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 NKX2-5P52952 324 aaPredicted RBP6.27□□□□□ -1.41
MSH5-218ENST00000494646 PTTG1IPP53801 180 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 RBX1P62877 108 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 CACNG7P62955 275 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 TMEM97Q5BJF2 176 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 LINC00269Q8N2A0 174 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 VAX2Q9UIW0 290 aa6.27□□□□□ -1.41
MSH5-218ENST00000494646 XKRY2A2RUG3 117 aa6.26□□□□□ -1.41
MSH5-218ENST00000494646 F2Z2F3 143 aa6.26□□□□□ -1.41
MSH5-218ENST00000494646 HLA-DQA1P01909 254 aa6.26□□□□□ -1.41
MSH5-218ENST00000494646 Q6ZNX1 250 aa6.26□□□□□ -1.41
MSH5-218ENST00000494646 Q6ZSA8 131 aa6.26□□□□□ -1.41
MSH5-218ENST00000494646 OCC1Q8TAD7 63 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms