RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 RAB5CP51148 216 aa6.22□□□□□ -1.41
UBR4-216ENST00000494503 HNRNPA3P51991 378 aaKnown RBP6.22□□□□□ -1.41
UBR4-216ENST00000494503 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
UBR4-216ENST00000494503 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
UBR4-216ENST00000494503 A0A0D9SG52 128 aa6.21□□□□□ -1.42
UBR4-216ENST00000494503 PAGE4O60829 102 aa6.21□□□□□ -1.42
UBR4-216ENST00000494503 PFDN1O60925 122 aa6.21□□□□□ -1.42
UBR4-216ENST00000494503 GIPP09681 153 aaPredicted RBP6.21□□□□□ -1.42
UBR4-216ENST00000494503 RBX1P62877 108 aa6.21□□□□□ -1.42
UBR4-216ENST00000494503 DGAT2L7PQ6IED9 249 aa6.21□□□□□ -1.42
UBR4-216ENST00000494503 OR10G8Q8NGN5 311 aa6.21□□□□□ -1.42
UBR4-216ENST00000494503 DAZAP1Q96EP5 407 aaKnown RBP6.21□□□□□ -1.42
UBR4-216ENST00000494503 AP5S1Q9NUS5 200 aa6.21□□□□□ -1.42
UBR4-216ENST00000494503 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.42
UBR4-216ENST00000494503 ARPC5O15511 151 aa6.2□□□□□ -1.42
UBR4-216ENST00000494503 TMEM97Q5BJF2 176 aa6.2□□□□□ -1.42
UBR4-216ENST00000494503 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
UBR4-216ENST00000494503 IGHV1-24A0A0C4DH33 117 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 TRBV6-1A0A0K0K1D8 114 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 SCO2A0A1W2PP80 73 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 PANO1I0J062 215 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 FHITP49789 147 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 REG3AQ06141 175 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 COX8CQ7Z4L0 72 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 BAGE2Q86Y30 109 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 C9orf163Q8N9P6 203 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 FAM213BQ8TBF2 198 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 SFT2D1Q8WV19 159 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 TCEAL7Q9BRU2 100 aa6.19□□□□□ -1.42
UBR4-216ENST00000494503 HMCN2Q8NDA2 5059 aa6.18□□□□□ -1.42
UBR4-216ENST00000494503 IGHV3-64A0A075B6Q5 118 aa6.18□□□□□ -1.42
UBR4-216ENST00000494503 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.18□□□□□ -1.42
UBR4-216ENST00000494503 IGKV3OR2-268A0A0C4DH90 116 aa6.18□□□□□ -1.42
UBR4-216ENST00000494503 UBE2L6O14933 153 aa6.18□□□□□ -1.42
UBR4-216ENST00000494503 CHTF8P0CG12 524 aa6.18□□□□□ -1.42
UBR4-216ENST00000494503 SULT1A2P50226 295 aa6.18□□□□□ -1.42
UBR4-216ENST00000494503 NTM-AS1Q6ZSK4 140 aa6.18□□□□□ -1.42
UBR4-216ENST00000494503 CLRN3Q8NCR9 226 aa6.18□□□□□ -1.42
UBR4-216ENST00000494503 H7C1H1 209 aa6.17□□□□□ -1.42
UBR4-216ENST00000494503 S100A9P06702 114 aaKnown RBP6.17□□□□□ -1.42
UBR4-216ENST00000494503 NKX2-5P52952 324 aaPredicted RBP6.17□□□□□ -1.42
UBR4-216ENST00000494503 WDR73Q6P4I2 378 aa6.17□□□□□ -1.42
UBR4-216ENST00000494503 PRR34Q9NV39 138 aa6.17□□□□□ -1.42
UBR4-216ENST00000494503 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
UBR4-216ENST00000494503 SNAI2O43623 268 aa6.16□□□□□ -1.42
UBR4-216ENST00000494503 OR5AL1P0C617 328 aa6.16□□□□□ -1.42
UBR4-216ENST00000494503 GZMBP10144 247 aa6.16□□□□□ -1.42
UBR4-216ENST00000494503 SDIM1Q6ZPB5 146 aa6.16□□□□□ -1.42
UBR4-216ENST00000494503 KCNRGQ8N5I3 272 aa6.16□□□□□ -1.42
UBR4-216ENST00000494503 C7orf33Q8WU49 177 aa6.16□□□□□ -1.42
UBR4-216ENST00000494503 TMEM243Q9BU79 118 aa6.16□□□□□ -1.42
UBR4-216ENST00000494503 A0A087WYN8 130 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 IGKV2-24A0A0C4DH68 120 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 CXCL1P09341 107 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 IQCJQ1A5X6 159 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 SUMO4Q6EEV6 95 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 Q6ZRU5 148 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 FER1L6-AS1Q8NA97 138 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 GTSF1Q8WW33 167 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 VAX2Q9UIW0 290 aa6.15□□□□□ -1.42
UBR4-216ENST00000494503 IGLV4-60A0A075B6I1 120 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 TRAV8-4A0A0B4J246 113 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 PHOX2AO14813 284 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 P01737 135 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 RPL35P42766 123 aaKnown RBP6.14□□□□□ -1.43
UBR4-216ENST00000494503 AMTP48728 403 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 CNBPP62633 177 aaKnown RBP6.14□□□□□ -1.43
UBR4-216ENST00000494503 HIGD2BQ4VC39 106 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 TMUB2Q71RG4 321 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 C20orf203Q8NBC4 194 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 OR2D3Q8NGH3 330 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 SSBP4Q9BWG4 385 aaPredicted RBP6.14□□□□□ -1.43
UBR4-216ENST00000494503 CYTL1Q9NRR1 136 aa6.14□□□□□ -1.43
UBR4-216ENST00000494503 GAGE12HA6NDE8 117 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 M0QY20 66 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 H2AFB1P0C5Y9 115 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 MAJINQ3KP22 176 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 AMMECR1LQ6DCA0 310 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 RASL11AQ6T310 242 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 LYPD6BQ8NI32 183 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 GNG13Q9P2W3 67 aa6.13□□□□□ -1.43
UBR4-216ENST00000494503 KANTRA0A1W2PQU2 76 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 XKRY2A2RUG3 117 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 UMAD1C9J7I0 102 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 TRGC1P0CF51 173 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 RPS20P60866 119 aaKnown RBP6.12□□□□□ -1.43
UBR4-216ENST00000494503 CACNG7P62955 275 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 COX6A2Q02221 97 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 COTL1Q14019 142 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 CENPWQ5EE01 88 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 CFAP161Q6P656 301 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 SPACA4Q8TDM5 124 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 RNF185Q96GF1 192 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 MLST8Q9BVC4 326 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 GFRA4Q9GZZ7 299 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 KIF25-AS1Q9Y6Z4 181 aa6.12□□□□□ -1.43
UBR4-216ENST00000494503 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms