RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TEN1Q86WV5 123 aa14.61□□□□□ -0.07
COL27A1-207ENST00000494090 SPAG11BQ08648 103 aa14.61□□□□□ -0.07
COL27A1-207ENST00000494090 Q8NA96 180 aa14.61□□□□□ -0.07
COL27A1-207ENST00000494090 LINC01620Q4KN68 170 aa14.61□□□□□ -0.07
COL27A1-207ENST00000494090 TMEM61Q8N0U2 210 aa14.61□□□□□ -0.07
COL27A1-207ENST00000494090 IGHV4-4A0A075B6R2 117 aa14.6□□□□□ -0.07
COL27A1-207ENST00000494090 ODF3BA8MYP8 253 aa14.6□□□□□ -0.07
COL27A1-207ENST00000494090 UNQ9165/PRO28630Q6UXU0 137 aa14.59□□□□□ -0.07
COL27A1-207ENST00000494090 DENND4AQ7Z401 1863 aa14.59□□□□□ -0.07
COL27A1-207ENST00000494090 JMJD7-PLA2G4BH0Y9G9 81 aa14.59□□□□□ -0.07
COL27A1-207ENST00000494090 DNAJC9-AS1A6NH13 148 aa14.59□□□□□ -0.07
COL27A1-207ENST00000494090 NDUFA11Q86Y39 141 aa14.59□□□□□ -0.07
COL27A1-207ENST00000494090 NCOA6Q14686 2063 aaPredicted RBP14.58□□□□□ -0.07
COL27A1-207ENST00000494090 FSTL3O95633 263 aa14.58□□□□□ -0.07
COL27A1-207ENST00000494090 WFDC2Q14508 124 aa14.58□□□□□ -0.07
COL27A1-207ENST00000494090 LINC00322Q6ZN03 302 aaPredicted RBP14.58□□□□□ -0.07
COL27A1-207ENST00000494090 ODF3Q96PU9 254 aa14.58□□□□□ -0.07
COL27A1-207ENST00000494090 C14orf177Q52M58 125 aa14.58□□□□□ -0.08
COL27A1-207ENST00000494090 ESM1Q9NQ30 184 aa14.58□□□□□ -0.08
COL27A1-207ENST00000494090 DEFB1P60022 68 aa14.58□□□□□ -0.08
COL27A1-207ENST00000494090 C4orf48Q5BLP8 95 aa14.58□□□□□ -0.08
COL27A1-207ENST00000494090 MLST8Q9BVC4 326 aa14.58□□□□□ -0.08
COL27A1-207ENST00000494090 MUC6Q6W4X9 2439 aa14.58□□□□□ -0.08
COL27A1-207ENST00000494090 RNASE8Q8TDE3 154 aaKnown RBP14.57□□□□□ -0.08
COL27A1-207ENST00000494090 NREPQ16612 68 aa14.57□□□□□ -0.08
COL27A1-207ENST00000494090 ZNF80P51504 273 aaPredicted RBP14.56□□□□□ -0.08
COL27A1-207ENST00000494090 MP68P56378 58 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 C1orf229Q6ZS94 237 aaPredicted RBP14.56□□□□□ -0.08
COL27A1-207ENST00000494090 DIRC1Q969H9 104 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 CCDC140Q96MF4 163 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 PRORYQ9H606 182 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 MAP6D1Q9H9H5 199 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 PTPRQQ9UMZ3 2332 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 TRBV12-3P01733 135 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 PLA2G5P39877 138 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 LMO4P61968 165 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 C20orf203Q8NBC4 194 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 KLK12Q9UKR0 248 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 FREM1Q5H8C1 2179 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 A0A0B4J2C4 111 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 GDF5OSQ5U4N7 250 aa14.56□□□□□ -0.08
COL27A1-207ENST00000494090 CHD3Q12873 2000 aaKnown RBP14.55□□□□□ -0.08
COL27A1-207ENST00000494090 RBM3P98179 157 aaKnown RBP14.55□□□□□ -0.08
COL27A1-207ENST00000494090 MDFICQ9P1T7 246 aa14.55□□□□□ -0.08
COL27A1-207ENST00000494090 ZFHX2Q9C0A1 2572 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-207ENST00000494090 LGALS9O00182 355 aa14.54□□□□□ -0.08
COL27A1-207ENST00000494090 IGHV1-58A0A0C4DH39 117 aa14.54□□□□□ -0.08
COL27A1-207ENST00000494090 SMIM9A6NGZ8 99 aa14.54□□□□□ -0.08
COL27A1-207ENST00000494090 IGLC6P0CF74 106 aa14.54□□□□□ -0.08
COL27A1-207ENST00000494090 MBD6Q96DN6 1003 aa14.54□□□□□ -0.08
COL27A1-207ENST00000494090 COL4A4P53420 1690 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-207ENST00000494090 FOXI1Q12951 378 aa14.53□□□□□ -0.08
COL27A1-207ENST00000494090 DAND5Q8N907 189 aa14.53□□□□□ -0.08
COL27A1-207ENST00000494090 RS1O15537 224 aa14.53□□□□□ -0.08
COL27A1-207ENST00000494090 IGF1P05019 195 aa14.53□□□□□ -0.08
COL27A1-207ENST00000494090 PDE6GP18545 87 aa14.52□□□□□ -0.09
COL27A1-207ENST00000494090 A0A1B0GX51 115 aa14.52□□□□□ -0.09
COL27A1-207ENST00000494090 TRBV10-2A0A0K0K1G8 114 aa14.51□□□□□ -0.09
COL27A1-207ENST00000494090 DYSFO75923 2080 aa14.51□□□□□ -0.09
COL27A1-207ENST00000494090 CRYGBP07316 175 aa14.51□□□□□ -0.09
COL27A1-207ENST00000494090 NCR3O14931 201 aa14.51□□□□□ -0.09
COL27A1-207ENST00000494090 ADAMTS9Q9P2N4 1935 aa14.51□□□□□ -0.09
COL27A1-207ENST00000494090 YPEL4Q96NS1 127 aa14.51□□□□□ -0.09
COL27A1-207ENST00000494090 Q6YL49 198 aa14.5□□□□□ -0.09
COL27A1-207ENST00000494090 C11orf45Q8TAV5 145 aa14.5□□□□□ -0.09
COL27A1-207ENST00000494090 LYRM9A8MSI8 78 aa14.5□□□□□ -0.09
COL27A1-207ENST00000494090 NACAE9PAV3 2078 aa14.5□□□□□ -0.09
COL27A1-207ENST00000494090 B5MCH6 92 aa14.5□□□□□ -0.09
COL27A1-207ENST00000494090 CHKB-CPT1BH3BT56 60 aa14.5□□□□□ -0.09
COL27A1-207ENST00000494090 H3BT86 120 aa14.49□□□□□ -0.09
COL27A1-207ENST00000494090 DEFB4AO15263 64 aa14.49□□□□□ -0.09
COL27A1-207ENST00000494090 IGHV4-28A0A0C4DH34 117 aa14.49□□□□□ -0.09
COL27A1-207ENST00000494090 ALPK3Q96L96 1907 aa14.49□□□□□ -0.09
COL27A1-207ENST00000494090 ATOX1O00244 68 aa14.49□□□□□ -0.09
COL27A1-207ENST00000494090 MIR7-3HGQ8N6C7 128 aa14.49□□□□□ -0.09
COL27A1-207ENST00000494090 ACACBO00763 2458 aa14.48□□□□□ -0.09
COL27A1-207ENST00000494090 G3V4G9 280 aa14.48□□□□□ -0.09
COL27A1-207ENST00000494090 LECT2O14960 151 aa14.48□□□□□ -0.09
COL27A1-207ENST00000494090 LINC01548A6NM66 108 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 TMEM256-PLSCR3K7ERE1 68 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 HIGD2BQ4VC39 106 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 UFSP1Q6NVU6 142 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 SMIM20Q8N5G0 67 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 B9D2Q9BPU9 175 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 ARHGAP21Q5T5U3 1957 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 HIVEP2P31629 2446 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 IGHV4-31P0DP07 118 aa14.47□□□□□ -0.09
COL27A1-207ENST00000494090 PSMB8P28062 276 aa14.46□□□□□ -0.09
COL27A1-207ENST00000494090 H7C423 109 aa14.46□□□□□ -0.1
COL27A1-207ENST00000494090 C22orf34Q6ZV56 151 aa14.46□□□□□ -0.1
COL27A1-207ENST00000494090 TECTAO75443 2155 aa14.46□□□□□ -0.1
COL27A1-207ENST00000494090 CLEC2BQ92478 149 aa14.45□□□□□ -0.1
COL27A1-207ENST00000494090 K7EQG2 157 aa14.45□□□□□ -0.1
COL27A1-207ENST00000494090 COX7BP24311 80 aa14.45□□□□□ -0.1
COL27A1-207ENST00000494090 LY6LH3BQJ8 138 aa14.45□□□□□ -0.1
COL27A1-207ENST00000494090 EBI3Q14213 229 aa14.44□□□□□ -0.1
COL27A1-207ENST00000494090 NFE4Q86UQ8 179 aa14.43□□□□□ -0.1
COL27A1-207ENST00000494090 MIAQ16674 131 aa14.43□□□□□ -0.1
COL27A1-207ENST00000494090 HILS1P60008 231 aa14.42□□□□□ -0.1
COL27A1-207ENST00000494090 DEFB114Q30KQ6 69 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms