RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 ZNF575Q86XF7 245 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 C18orf15Q96N68 181 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 HIST1H4GQ99525 98 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 MRPL35Q9NZE8 188 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 TRBV20-1A0A075B6N2 111 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 IGHV7-4-1A0A0J9YVY3 117 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 BRI3O95415 125 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 HERVK_113P61574 105 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 BLCAPP62952 87 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 HES1Q14469 280 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 DLX4Q92988 240 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 EEF1AKMT3Q96AZ1 226 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 METTL26Q96S19 204 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 U3KQE9 123 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 A6NDX4 124 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 TMEM11P17152 192 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 ERCC8Q13216 396 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 SPANXN1Q5VSR9 72 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 GTSCR1Q86UQ5 136 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 POM121L12Q8N7R1 296 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 Q8TAT8 98 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 LINC00477Q96M19 166 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 DPH3P1Q9H4G8 78 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 TRAV21A0A0B4J279 112 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 IGKV3D-20A0A0C4DH25 116 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 FAM223BA6NKX1 122 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 OVOL1O14753 267 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 AZU1P20160 251 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 UBE2D1P51668 147 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 CRIP2P52943 208 aaPredicted RBP7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 SUMO2P61956 95 aaKnown RBP7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 APRG1Q8IVJ8 170 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 SBSPONQ8IVN8 264 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 FAM223AQ8IWN6 122 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 NEXN-AS1Q8NBZ9 246 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 C1QTNF4Q9BXJ3 329 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 EDA2RQ9HAV5 297 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 PRO0461Q9UI25 63 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 IGHV7-81A0A0B4J1V7 117 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 NXPH4O95158 308 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 TMEM141Q96I45 108 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 SCGB3A1Q96QR1 104 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 AGPAT4-IT1Q9H0P7 198 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 MSRB1Q9NZV6 116 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 H3BUA1 57 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 NDPQ00604 133 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 C18orf65Q6ZTR6 163 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 Q8N9W7 124 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 SPANXA1Q9NS26 97 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 MRPL16Q9NX20 251 aaKnown RBP7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 CYSLTR1Q9Y271 337 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 IGHV4OR15-8A0A075B7B6 117 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 A0A087WW49 117 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 TMEM262E9PQX1 116 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 ASIPP42127 132 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 UBE2D3P61077 147 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 UBE2D2P62837 147 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 C15orf32Q32M92 178 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 CFAP126Q5VTH2 177 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 C8orf86Q6ZUL3 223 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 TIMM17AQ99595 171 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 KRTAP4-12Q9BQ66 201 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 NAA38Q9BRA0 125 aaKnown RBP7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 UFC1Q9Y3C8 167 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 KMT2AQ03164 3969 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 DNAH10Q8IVF4 4471 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 K7ERJ3 54 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 APOMO95445 188 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 LGALS1P09382 135 aaKnown RBP7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 FXYD7P58549 80 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 FOXI1Q12951 378 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 TM4SF20Q53R12 229 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 KHDC1LQ5JSQ8 128 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 OR10J6PQ8NGY7 276 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 GLMPQ8WWB7 406 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 PPDPFLQ8WWR9 84 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 LINC01600Q96MT4 127 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 SPAG8Q99932 426 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 TRAV8-2A0A0B4J237 113 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 TRGV3P03979 118 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 WFDC2Q14508 124 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 MORN3Q6PF18 240 aaPredicted RBP7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 WFDC3Q8IUB2 231 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 MAPKAPK5-AS1Q8N8E1 139 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 PRADC1Q9BSG0 188 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 MUC4Q99102 2169 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 ZNF815PA8K554 130 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 PRAC2D3DTV9 90 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 NDUFA4O00483 81 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 HLA-DMBP28068 263 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 ETDBQ3ZM63 59 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 C9orf66Q5T8R8 295 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 C2orf66Q6UXQ4 117 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 TEN1Q86WV5 123 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 BAALCQ8WXS3 180 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 FAM19A4Q96LR4 140 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms