RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 ZNF575Q86XF7 245 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 C18orf15Q96N68 181 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 HIST1H4GQ99525 98 aa7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 MRPL35Q9NZE8 188 aaKnown RBP7.95□□□□□ -1.14
PDLIM1-205ENST00000493949 TRBV20-1A0A075B6N2 111 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 IGHV7-4-1A0A0J9YVY3 117 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 BRI3O95415 125 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 HERVK_113P61574 105 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 BLCAPP62952 87 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 HES1Q14469 280 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 DLX4Q92988 240 aaPredicted RBP7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 EEF1AKMT3Q96AZ1 226 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 METTL26Q96S19 204 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 U3KQE9 123 aa7.94□□□□□ -1.14
PDLIM1-205ENST00000493949 A6NDX4 124 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 TMEM11P17152 192 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 ERCC8Q13216 396 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 SPANXN1Q5VSR9 72 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 GTSCR1Q86UQ5 136 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 POM121L12Q8N7R1 296 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 Q8TAT8 98 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 LINC00477Q96M19 166 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 DPH3P1Q9H4G8 78 aa7.93□□□□□ -1.14
PDLIM1-205ENST00000493949 TRAV21A0A0B4J279 112 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 IGKV3D-20A0A0C4DH25 116 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 FAM223BA6NKX1 122 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 OVOL1O14753 267 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 AZU1P20160 251 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 UBE2D1P51668 147 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 CRIP2P52943 208 aaPredicted RBP7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 SUMO2P61956 95 aaKnown RBP7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 APRG1Q8IVJ8 170 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 SBSPONQ8IVN8 264 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 FAM223AQ8IWN6 122 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 NEXN-AS1Q8NBZ9 246 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 C1QTNF4Q9BXJ3 329 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 EDA2RQ9HAV5 297 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 PRO0461Q9UI25 63 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
PDLIM1-205ENST00000493949 IGHV7-81A0A0B4J1V7 117 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 NXPH4O95158 308 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 TMEM141Q96I45 108 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 SCGB3A1Q96QR1 104 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 AGPAT4-IT1Q9H0P7 198 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 MSRB1Q9NZV6 116 aa7.91□□□□□ -1.14
PDLIM1-205ENST00000493949 H3BUA1 57 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 NDPQ00604 133 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 C18orf65Q6ZTR6 163 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 Q8N9W7 124 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 SPANXA1Q9NS26 97 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 MRPL16Q9NX20 251 aaKnown RBP7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 CYSLTR1Q9Y271 337 aa7.9□□□□□ -1.14
PDLIM1-205ENST00000493949 IGHV4OR15-8A0A075B7B6 117 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 A0A087WW49 117 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 TMEM262E9PQX1 116 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 ASIPP42127 132 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 UBE2D3P61077 147 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 UBE2D2P62837 147 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 C15orf32Q32M92 178 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 CFAP126Q5VTH2 177 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 C8orf86Q6ZUL3 223 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 TIMM17AQ99595 171 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 KRTAP4-12Q9BQ66 201 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 NAA38Q9BRA0 125 aaKnown RBP7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 UFC1Q9Y3C8 167 aa7.89□□□□□ -1.15
PDLIM1-205ENST00000493949 KMT2AQ03164 3969 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 DNAH10Q8IVF4 4471 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 K7ERJ3 54 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 APOMO95445 188 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 LGALS1P09382 135 aaKnown RBP7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 FXYD7P58549 80 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 FOXI1Q12951 378 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 TM4SF20Q53R12 229 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 KHDC1LQ5JSQ8 128 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 OR10J6PQ8NGY7 276 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 GLMPQ8WWB7 406 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 PPDPFLQ8WWR9 84 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 LINC01600Q96MT4 127 aa7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 SPAG8Q99932 426 aaPredicted RBP7.88□□□□□ -1.15
PDLIM1-205ENST00000493949 TRAV8-2A0A0B4J237 113 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 TRGV3P03979 118 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 WFDC2Q14508 124 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 MORN3Q6PF18 240 aaPredicted RBP7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 WFDC3Q8IUB2 231 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 MAPKAPK5-AS1Q8N8E1 139 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 PRADC1Q9BSG0 188 aa7.87□□□□□ -1.15
PDLIM1-205ENST00000493949 MUC4Q99102 2169 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 ZNF815PA8K554 130 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 PRAC2D3DTV9 90 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 NDUFA4O00483 81 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 HLA-DMBP28068 263 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 ETDBQ3ZM63 59 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 C9orf66Q5T8R8 295 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 C2orf66Q6UXQ4 117 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 TEN1Q86WV5 123 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 BAALCQ8WXS3 180 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 FAM19A4Q96LR4 140 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms