RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 Q6ZSV7 163 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 C19orf71A6NCJ1 209 aa8.79□□□□□ -1
BRCA1-222ENST00000493919 BUB3O43684 328 aa8.79□□□□□ -1
BRCA1-222ENST00000493919 MYCNOSP40205 109 aa8.79□□□□□ -1
BRCA1-222ENST00000493919 RITA1Q96K30 269 aa8.79□□□□□ -1
BRCA1-222ENST00000493919 MOB4Q9Y3A3 225 aa8.79□□□□□ -1
BRCA1-222ENST00000493919 IGKV1D-13A0A0B4J2D9 117 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 H3BVH4 76 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 IGKV1-13P0DP09 117 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 LINC00205P59089 165 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 AAMDCQ9H7C9 122 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 H3BMM0 161 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 SYNGR2O43760 224 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 APOC4P55056 127 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 BLCAPP62952 87 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 LINC01559Q495D7 138 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 HIST2H2BDQ6DRA6 164 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 CEMP1Q6PRD7 247 aaPredicted RBP8.78□□□□□ -1
BRCA1-222ENST00000493919 UBE2WQ96B02 151 aa8.78□□□□□ -1
BRCA1-222ENST00000493919 TRBV7-3A0A075B6L6 115 aa8.77□□□□□ -1.01
BRCA1-222ENST00000493919 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
BRCA1-222ENST00000493919 PROP1O75360 226 aa8.77□□□□□ -1.01
BRCA1-222ENST00000493919 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
BRCA1-222ENST00000493919 LINC01006Q8NI28 216 aa8.77□□□□□ -1.01
BRCA1-222ENST00000493919 PRSS22Q9GZN4 317 aa8.77□□□□□ -1.01
BRCA1-222ENST00000493919 ZNF702PQ9H963 129 aa8.77□□□□□ -1.01
BRCA1-222ENST00000493919 U3KQE9 123 aa8.77□□□□□ -1.01
BRCA1-222ENST00000493919 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 PAX4O43316 350 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 SRSF9Q13242 221 aaKnown RBP eCLIP8.76□□□□□ -1.01
BRCA1-222ENST00000493919 Q6ZS46 218 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 LINC00305Q7Z4B0 112 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 HIST1H4GQ99525 98 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 CLPSL1A2RUU4 121 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 SPINK4O60575 86 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 MFAP2P55001 183 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 ERCC8Q13216 396 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 Q8N6K4 173 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 C5orf56Q8N8D9 126 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-222ENST00000493919 GPHA2Q96T91 129 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 CCL28Q9NRJ3 127 aa8.76□□□□□ -1.01
BRCA1-222ENST00000493919 A0A1B0GXF2 115 aa8.75□□□□□ -1.01
BRCA1-222ENST00000493919 UPK2O00526 184 aa8.75□□□□□ -1.01
BRCA1-222ENST00000493919 IGKV1-16P04430 117 aa8.75□□□□□ -1.01
BRCA1-222ENST00000493919 SCO2A0A1W2PP80 73 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 LINC01548A6NM66 108 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 LINC00473A8K010 186 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 RPL18AQ02543 176 aaKnown RBP8.74□□□□□ -1.01
BRCA1-222ENST00000493919 PLGLAQ15195 96 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 BEAN1Q3B7T3 259 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 ZNF414Q96IQ9 312 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 SPRY2O43597 315 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 IGLV2-14P01704 120 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 UBE2D1P51668 147 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 ZNF818PQ6ZRF7 136 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 Q8N9W7 124 aa8.74□□□□□ -1.01
BRCA1-222ENST00000493919 UBE2L5PA0A1B0GUS4 154 aa8.73□□□□□ -1.01
BRCA1-222ENST00000493919 LTAP01374 205 aa8.73□□□□□ -1.01
BRCA1-222ENST00000493919 SPATA3Q8NHX4 192 aa8.73□□□□□ -1.01
BRCA1-222ENST00000493919 TMEM190Q8WZ59 177 aa8.73□□□□□ -1.01
BRCA1-222ENST00000493919 PROK1P58294 105 aa8.72□□□□□ -1.01
BRCA1-222ENST00000493919 HBBP68871 147 aa8.72□□□□□ -1.01
BRCA1-222ENST00000493919 GDF5OSQ5U4N7 250 aa8.72□□□□□ -1.01
BRCA1-222ENST00000493919 FP248Q71RG6 208 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-222ENST00000493919 Q8N2B8 174 aa8.72□□□□□ -1.01
BRCA1-222ENST00000493919 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
BRCA1-222ENST00000493919 CFHR3Q02985 330 aa8.71□□□□□ -1.02
BRCA1-222ENST00000493919 ZFP2Q6ZN57 461 aa8.71□□□□□ -1.02
BRCA1-222ENST00000493919 ZNF503Q96F45 646 aa8.71□□□□□ -1.02
BRCA1-222ENST00000493919 C17orf77Q96MU5 243 aa8.71□□□□□ -1.02
BRCA1-222ENST00000493919 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 LINC01549A6NIU2 74 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 NDUFA3O95167 84 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 CACNG7P62955 275 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 PRR20EP86478 221 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 PRR20CP86479 221 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 PRR20DP86480 221 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 PRR20BP86481 221 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 PRR20AP86496 221 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 FAM104BQ5XKR9 115 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 PRR26Q8N8Z3 221 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 NPBQ8NG41 125 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 CYSTM1Q9H1C7 97 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 INS-IGF2F8WCM5 200 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 ATP5EP56381 51 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-222ENST00000493919 SYNJ2BPP57105 145 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 KRTAP10-3P60369 221 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 EIF4EBP1Q13541 118 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-222ENST00000493919 ORMDL2Q53FV1 153 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 CENPWQ5EE01 88 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 RNF5Q99942 180 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 PSENENQ9NZ42 101 aa8.7□□□□□ -1.02
BRCA1-222ENST00000493919 K7EMT4 169 aa8.69□□□□□ -1.02
BRCA1-222ENST00000493919 PEX7O00628 323 aa8.69□□□□□ -1.02
BRCA1-222ENST00000493919 SDIM1Q6ZPB5 146 aa8.69□□□□□ -1.02
BRCA1-222ENST00000493919 ZNF329Q86UD4 541 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms