RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 ENHOQ6UWT2 76 aa10.85□□□□□ -0.67
PTPRU-208ENST00000493601 AP1S3Q96PC3 154 aa10.85□□□□□ -0.67
PTPRU-208ENST00000493601 CHCHD5Q9BSY4 110 aa10.85□□□□□ -0.67
PTPRU-208ENST00000493601 A0A0D9SG52 128 aa10.84□□□□□ -0.67
PTPRU-208ENST00000493601 KANTRA0A1W2PQU2 76 aa10.84□□□□□ -0.67
PTPRU-208ENST00000493601 HMSDA8MTL9 139 aa10.84□□□□□ -0.67
PTPRU-208ENST00000493601 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
PTPRU-208ENST00000493601 BCL2L11O43521 198 aa10.84□□□□□ -0.67
PTPRU-208ENST00000493601 H2AFB1P0C5Y9 115 aa10.84□□□□□ -0.67
PTPRU-208ENST00000493601 SMIM17P0DL12 118 aa10.84□□□□□ -0.67
PTPRU-208ENST00000493601 MUC21A0A0G2JKD1 596 aa10.83□□□□□ -0.68
PTPRU-208ENST00000493601 MUC21A0A140T8X8 626 aa10.83□□□□□ -0.68
PTPRU-208ENST00000493601 HLA-DQA1P01909 254 aa10.83□□□□□ -0.68
PTPRU-208ENST00000493601 EIF5AP63241 154 aaKnown RBP10.83□□□□□ -0.68
PTPRU-208ENST00000493601 MIAQ16674 131 aa10.83□□□□□ -0.68
PTPRU-208ENST00000493601 TMUB2Q71RG4 321 aa10.83□□□□□ -0.68
PTPRU-208ENST00000493601 CIRBP-AS1Q8TBR5 109 aa10.83□□□□□ -0.68
PTPRU-208ENST00000493601 VAX2Q9UIW0 290 aa10.83□□□□□ -0.68
PTPRU-208ENST00000493601 RPL35P42766 123 aaKnown RBP10.82□□□□□ -0.68
PTPRU-208ENST00000493601 MANBALQ9NQG1 85 aa10.82□□□□□ -0.68
PTPRU-208ENST00000493601 USP17L23D6RBM5 183 aa10.81□□□□□ -0.68
PTPRU-208ENST00000493601 IGLV2-8P01709 118 aa10.81□□□□□ -0.68
PTPRU-208ENST00000493601 SSTP61278 116 aa10.81□□□□□ -0.68
PTPRU-208ENST00000493601 TRBV25-1A0A075B6N4 114 aa10.8□□□□□ -0.68
PTPRU-208ENST00000493601 NTM-AS1Q6ZSK4 140 aa10.8□□□□□ -0.68
PTPRU-208ENST00000493601 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
PTPRU-208ENST00000493601 DERL1Q9BUN8 251 aa10.8□□□□□ -0.68
PTPRU-208ENST00000493601 KIF25-AS1Q9Y6Z4 181 aa10.8□□□□□ -0.68
PTPRU-208ENST00000493601 H7C1H1 209 aa10.79□□□□□ -0.68
PTPRU-208ENST00000493601 PRR34Q9NV39 138 aa10.79□□□□□ -0.68
PTPRU-208ENST00000493601 GNG13Q9P2W3 67 aa10.79□□□□□ -0.68
PTPRU-208ENST00000493601 KRTAP10-4P60372 401 aaPredicted RBP10.78□□□□□ -0.68
PTPRU-208ENST00000493601 RPS20P60866 119 aaKnown RBP10.78□□□□□ -0.68
PTPRU-208ENST00000493601 RBX1P62877 108 aa10.78□□□□□ -0.68
PTPRU-208ENST00000493601 CENPWQ5EE01 88 aa10.78□□□□□ -0.68
PTPRU-208ENST00000493601 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
PTPRU-208ENST00000493601 FER1L6-AS1Q8NA97 138 aa10.78□□□□□ -0.68
PTPRU-208ENST00000493601 TPPP3Q9BW30 176 aa10.78□□□□□ -0.68
PTPRU-208ENST00000493601 IGHV1-24A0A0C4DH33 117 aa10.77□□□□□ -0.69
PTPRU-208ENST00000493601 MGPP08493 103 aa10.77□□□□□ -0.69
PTPRU-208ENST00000493601 GAGE6Q13070 117 aa10.77□□□□□ -0.69
PTPRU-208ENST00000493601 IQCJQ1A5X6 159 aa10.77□□□□□ -0.69
PTPRU-208ENST00000493601 DGAT2L7PQ6IED9 249 aa10.77□□□□□ -0.69
PTPRU-208ENST00000493601 LINC00269Q8N2A0 174 aa10.77□□□□□ -0.69
PTPRU-208ENST00000493601 DAZAP1Q96EP5 407 aaKnown RBP10.77□□□□□ -0.69
PTPRU-208ENST00000493601 TRAV1-1A0A0B4J248 108 aa10.76□□□□□ -0.69
PTPRU-208ENST00000493601 TEX46H3BTG2 121 aa10.76□□□□□ -0.69
PTPRU-208ENST00000493601 M0QY20 66 aa10.76□□□□□ -0.69
PTPRU-208ENST00000493601 PRSS1P07477 247 aa10.76□□□□□ -0.69
PTPRU-208ENST00000493601 IGLC6P0CF74 106 aa10.76□□□□□ -0.69
PTPRU-208ENST00000493601 CACNG7P62955 275 aa10.76□□□□□ -0.69
PTPRU-208ENST00000493601 OR2D3Q8NGH3 330 aa10.76□□□□□ -0.69
PTPRU-208ENST00000493601 SMIM12Q96EX1 92 aa10.76□□□□□ -0.69
PTPRU-208ENST00000493601 XKRY2A2RUG3 117 aa10.75□□□□□ -0.69
PTPRU-208ENST00000493601 GZMBP10144 247 aa10.75□□□□□ -0.69
PTPRU-208ENST00000493601 GNG4P50150 75 aa10.75□□□□□ -0.69
PTPRU-208ENST00000493601 RAB5CP51148 216 aa10.75□□□□□ -0.69
PTPRU-208ENST00000493601 CCL20P78556 96 aa10.75□□□□□ -0.69
PTPRU-208ENST00000493601 OXTP01178 125 aa10.74□□□□□ -0.69
PTPRU-208ENST00000493601 SUMO4Q6EEV6 95 aa10.74□□□□□ -0.69
PTPRU-208ENST00000493601 EIF5AL1Q6IS14 154 aaKnown RBP10.74□□□□□ -0.69
PTPRU-208ENST00000493601 C19orf71A6NCJ1 209 aa10.73□□□□□ -0.69
PTPRU-208ENST00000493601 F2Z2F3 143 aa10.73□□□□□ -0.69
PTPRU-208ENST00000493601 PDE6DO43924 150 aa10.73□□□□□ -0.69
PTPRU-208ENST00000493601 P01737 135 aa10.73□□□□□ -0.69
PTPRU-208ENST00000493601 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
PTPRU-208ENST00000493601 REG3AQ06141 175 aa10.73□□□□□ -0.69
PTPRU-208ENST00000493601 KRTAP26-1Q6PEX3 210 aa10.73□□□□□ -0.69
PTPRU-208ENST00000493601 C9orf163Q8N9P6 203 aa10.73□□□□□ -0.69
PTPRU-208ENST00000493601 CLRN3Q8NCR9 226 aa10.73□□□□□ -0.69
PTPRU-208ENST00000493601 TRGC1P0CF51 173 aa10.72□□□□□ -0.69
PTPRU-208ENST00000493601 NKX2-5P52952 324 aaPredicted RBP10.72□□□□□ -0.69
PTPRU-208ENST00000493601 MEF2BQ02080 365 aaPredicted RBP10.72□□□□□ -0.69
PTPRU-208ENST00000493601 RASL11AQ6T310 242 aa10.72□□□□□ -0.69
PTPRU-208ENST00000493601 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
PTPRU-208ENST00000493601 BIN3Q9NQY0 253 aa10.72□□□□□ -0.69
PTPRU-208ENST00000493601 TRAV8-4A0A0B4J246 113 aa10.71□□□□□ -0.69
PTPRU-208ENST00000493601 IFNA1P01562 189 aa10.71□□□□□ -0.69
PTPRU-208ENST00000493601 LRP1Q07954 4544 aaKnown RBP10.71□□□□□ -0.69
PTPRU-208ENST00000493601 SERTAD4-AS1Q5TG53 156 aa10.71□□□□□ -0.69
PTPRU-208ENST00000493601 PGLYRP4Q96LB8 373 aa10.71□□□□□ -0.69
PTPRU-208ENST00000493601 IGLV10-54A0A075B6I4 117 aa10.7□□□□□ -0.7
PTPRU-208ENST00000493601 A0A1B0GUV1 79 aa10.7□□□□□ -0.7
PTPRU-208ENST00000493601 RAB19A4D1S5 217 aa10.7□□□□□ -0.7
PTPRU-208ENST00000493601 C20orf203Q8NBC4 194 aa10.7□□□□□ -0.7
PTPRU-208ENST00000493601 DPH3P1Q9H4G8 78 aa10.7□□□□□ -0.7
PTPRU-208ENST00000493601 UBE2L6O14933 153 aa10.69□□□□□ -0.7
PTPRU-208ENST00000493601 SULT1A2P50226 295 aa10.69□□□□□ -0.7
PTPRU-208ENST00000493601 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
PTPRU-208ENST00000493601 LYZL1Q6UWQ5 148 aa10.69□□□□□ -0.7
PTPRU-208ENST00000493601 NIT2Q9NQR4 276 aa10.69□□□□□ -0.7
PTPRU-208ENST00000493601 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.69□□□□□ -0.7
PTPRU-208ENST00000493601 TRBV20OR9-2A0A075B6H5 130 aa10.68□□□□□ -0.7
PTPRU-208ENST00000493601 hDV102S1A0JD36 115 aa10.68□□□□□ -0.7
PTPRU-208ENST00000493601 BCL2P10415 239 aa10.68□□□□□ -0.7
PTPRU-208ENST00000493601 NTF3P20783 257 aa10.68□□□□□ -0.7
PTPRU-208ENST00000493601 CTRLP40313 264 aa10.68□□□□□ -0.7
PTPRU-208ENST00000493601 MED9Q9NWA0 146 aa10.68□□□□□ -0.7
PTPRU-208ENST00000493601 IGLV4-60A0A075B6I1 120 aa10.67□□□□□ -0.7
PTPRU-208ENST00000493601 COTL1Q14019 142 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms