RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 F5H697 171 aa7.6□□□□□ -1.19
COL6A3-213ENST00000493475 OXTP01178 125 aa7.6□□□□□ -1.19
COL6A3-213ENST00000493475 IGLV2-8P01709 118 aa7.6□□□□□ -1.19
COL6A3-213ENST00000493475 CXCL1P09341 107 aa7.6□□□□□ -1.19
COL6A3-213ENST00000493475 ZNF726P1Q15940 193 aa7.6□□□□□ -1.19
COL6A3-213ENST00000493475 C15orf54Q8N8G6 183 aa7.6□□□□□ -1.19
COL6A3-213ENST00000493475 OR10G8Q8NGN5 311 aa7.6□□□□□ -1.19
COL6A3-213ENST00000493475 UMAD1C9J7I0 102 aa7.59□□□□□ -1.19
COL6A3-213ENST00000493475 CRIP1P50238 77 aa7.59□□□□□ -1.19
COL6A3-213ENST00000493475 H7C1H1 209 aa7.58□□□□□ -1.2
COL6A3-213ENST00000493475 ARPC5O15511 151 aa7.58□□□□□ -1.2
COL6A3-213ENST00000493475 HLA-DQA1P01909 254 aa7.58□□□□□ -1.2
COL6A3-213ENST00000493475 EIF5AP63241 154 aaKnown RBP7.58□□□□□ -1.2
COL6A3-213ENST00000493475 LINC01620Q4KN68 170 aa7.58□□□□□ -1.2
COL6A3-213ENST00000493475 DGAT2L7PQ6IED9 249 aa7.58□□□□□ -1.2
COL6A3-213ENST00000493475 CIRBP-AS1Q8TBR5 109 aa7.58□□□□□ -1.2
COL6A3-213ENST00000493475 AP1S3Q96PC3 154 aa7.58□□□□□ -1.2
COL6A3-213ENST00000493475 MRPL18Q9H0U6 180 aaKnown RBP7.58□□□□□ -1.2
COL6A3-213ENST00000493475 TRBV25-1A0A075B6N4 114 aa7.57□□□□□ -1.2
COL6A3-213ENST00000493475 BAGE2Q86Y30 109 aa7.57□□□□□ -1.2
COL6A3-213ENST00000493475 SFT2D1Q8WV19 159 aa7.57□□□□□ -1.2
COL6A3-213ENST00000493475 Q9UF83 564 aa7.57□□□□□ -1.2
COL6A3-213ENST00000493475 PAGE4O60829 102 aa7.56□□□□□ -1.2
COL6A3-213ENST00000493475 OR5AL1P0C617 328 aa7.56□□□□□ -1.2
COL6A3-213ENST00000493475 RPL37AP61513 92 aaKnown RBP7.56□□□□□ -1.2
COL6A3-213ENST00000493475 RPL19P84098 196 aaKnown RBP7.56□□□□□ -1.2
COL6A3-213ENST00000493475 Q5BKY6 102 aa7.56□□□□□ -1.2
COL6A3-213ENST00000493475 NEXN-AS1Q8NBZ9 246 aa7.56□□□□□ -1.2
COL6A3-213ENST00000493475 CLRN3Q8NCR9 226 aa7.56□□□□□ -1.2
COL6A3-213ENST00000493475 DERL1Q9BUN8 251 aa7.56□□□□□ -1.2
COL6A3-213ENST00000493475 XKRY2A2RUG3 117 aa7.55□□□□□ -1.2
COL6A3-213ENST00000493475 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
COL6A3-213ENST00000493475 TEX46H3BTG2 121 aa7.55□□□□□ -1.2
COL6A3-213ENST00000493475 MPV17L2Q567V2 206 aa7.55□□□□□ -1.2
COL6A3-213ENST00000493475 PRR27Q6MZM9 219 aa7.55□□□□□ -1.2
COL6A3-213ENST00000493475 OR10AG1Q8NH19 301 aa7.55□□□□□ -1.2
COL6A3-213ENST00000493475 FAM213BQ8TBF2 198 aa7.55□□□□□ -1.2
COL6A3-213ENST00000493475 DAZAP1Q96EP5 407 aaKnown RBP7.55□□□□□ -1.2
COL6A3-213ENST00000493475 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
COL6A3-213ENST00000493475 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.54□□□□□ -1.2
COL6A3-213ENST00000493475 IGHV1-24A0A0C4DH33 117 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 A0A0D9SG52 128 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 KANTRA0A1W2PQU2 76 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 SNAI2O43623 268 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 RPS20P60866 119 aaKnown RBP7.54□□□□□ -1.2
COL6A3-213ENST00000493475 ZNF345Q14585 488 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 RGS21Q2M5E4 152 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 KCNRGQ8N5I3 272 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 DNAJC30Q96LL9 226 aa7.54□□□□□ -1.2
COL6A3-213ENST00000493475 TRAV8-4A0A0B4J246 113 aa7.53□□□□□ -1.2
COL6A3-213ENST00000493475 P01737 135 aa7.53□□□□□ -1.2
COL6A3-213ENST00000493475 WDR73Q6P4I2 378 aa7.53□□□□□ -1.2
COL6A3-213ENST00000493475 DPH3Q96FX2 82 aa7.53□□□□□ -1.2
COL6A3-213ENST00000493475 TPPP3Q9BW30 176 aa7.53□□□□□ -1.2
COL6A3-213ENST00000493475 MANBALQ9NQG1 85 aa7.53□□□□□ -1.2
COL6A3-213ENST00000493475 VAX2Q9UIW0 290 aa7.53□□□□□ -1.2
COL6A3-213ENST00000493475 UBE2L6O14933 153 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 MGPP08493 103 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 GZMBP10144 247 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 RBX1P62877 108 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 CACNG7P62955 275 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 TMUB2Q71RG4 321 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 MBD3L1Q8WWY6 194 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 BIN3Q9NQY0 253 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 PRR34Q9NV39 138 aa7.52□□□□□ -1.21
COL6A3-213ENST00000493475 A0A1B0GV50 99 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 TRGC1P0CF51 173 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 SSTP61278 116 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 GAGE6Q13070 117 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 IQCJQ1A5X6 159 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 EIF5AL1Q6IS14 154 aaKnown RBP7.51□□□□□ -1.21
COL6A3-213ENST00000493475 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 FER1L6-AS1Q8NA97 138 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 SMIM12Q96EX1 92 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 MLST8Q9BVC4 326 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 CYTL1Q9NRR1 136 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
COL6A3-213ENST00000493475 hDV102S1A0JD36 115 aa7.5□□□□□ -1.21
COL6A3-213ENST00000493475 F2Z2F3 143 aa7.5□□□□□ -1.21
COL6A3-213ENST00000493475 RPL35P42766 123 aaKnown RBP7.5□□□□□ -1.21
COL6A3-213ENST00000493475 REG3AQ06141 175 aa7.5□□□□□ -1.21
COL6A3-213ENST00000493475 CFAP161Q6P656 301 aa7.5□□□□□ -1.21
COL6A3-213ENST00000493475 CLPSL2Q6UWE3 100 aa7.5□□□□□ -1.21
COL6A3-213ENST00000493475 TMEM243Q9BU79 118 aa7.5□□□□□ -1.21
COL6A3-213ENST00000493475 DPH3P1Q9H4G8 78 aa7.5□□□□□ -1.21
COL6A3-213ENST00000493475 IGHV3-64A0A075B6Q5 118 aa7.49□□□□□ -1.21
COL6A3-213ENST00000493475 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
COL6A3-213ENST00000493475 MUC21A0A140T8X8 626 aa7.49□□□□□ -1.21
COL6A3-213ENST00000493475 IFNA1P01562 189 aa7.49□□□□□ -1.21
COL6A3-213ENST00000493475 PRSS1P07477 247 aa7.49□□□□□ -1.21
COL6A3-213ENST00000493475 OR2D3Q8NGH3 330 aa7.49□□□□□ -1.21
COL6A3-213ENST00000493475 RNF185Q96GF1 192 aa7.49□□□□□ -1.21
COL6A3-213ENST00000493475 A0A1B0GUV1 79 aa7.48□□□□□ -1.21
COL6A3-213ENST00000493475 HMSDA8MTL9 139 aa7.48□□□□□ -1.21
COL6A3-213ENST00000493475 BCL2L11O43521 198 aa7.48□□□□□ -1.21
COL6A3-213ENST00000493475 GNG4P50150 75 aa7.48□□□□□ -1.21
COL6A3-213ENST00000493475 SULT1A2P50226 295 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms