RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 C1orf43Q9BWL3 253 aa9.09□□□□□ -0.95
IRF1-210ENST00000493208 KRTAP17-1Q9BYP8 105 aa9.09□□□□□ -0.95
IRF1-210ENST00000493208 TRBV25-1A0A075B6N4 114 aa9.08□□□□□ -0.96
IRF1-210ENST00000493208 UBE2WQ96B02 151 aa9.08□□□□□ -0.96
IRF1-210ENST00000493208 KLK12Q9UKR0 248 aa9.08□□□□□ -0.96
IRF1-210ENST00000493208 MGPP08493 103 aa9.07□□□□□ -0.96
IRF1-210ENST00000493208 SSTP61278 116 aa9.07□□□□□ -0.96
IRF1-210ENST00000493208 NEXN-AS1Q8NBZ9 246 aa9.07□□□□□ -0.96
IRF1-210ENST00000493208 DERL1Q9BUN8 251 aa9.07□□□□□ -0.96
IRF1-210ENST00000493208 WDR73Q6P4I2 378 aa9.06□□□□□ -0.96
IRF1-210ENST00000493208 ANGP03950 147 aaKnown RBP9.05□□□□□ -0.96
IRF1-210ENST00000493208 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
IRF1-210ENST00000493208 MIAQ16674 131 aa9.05□□□□□ -0.96
IRF1-210ENST00000493208 BORCS7Q96B45 105 aa9.05□□□□□ -0.96
IRF1-210ENST00000493208 DPH3P1Q9H4G8 78 aa9.05□□□□□ -0.96
IRF1-210ENST00000493208 RYR1P21817 5038 aa9.05□□□□□ -0.96
IRF1-210ENST00000493208 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 IGHV1-24A0A0C4DH33 117 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 MUC21A0A0G2JKD1 596 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 MUC21A0A140T8X8 626 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 RAB19A4D1S5 217 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 C19orf71A6NCJ1 209 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 TMEM250H0YL14 139 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 UBE2L6O14933 153 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 IGLC6P0CF74 106 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 TEX261Q6UWH6 196 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 Q6ZNX1 250 aa9.04□□□□□ -0.96
IRF1-210ENST00000493208 RPP21Q9H633 154 aaKnown RBP9.04□□□□□ -0.96
IRF1-210ENST00000493208 PCLOQ9Y6V0 5065 aa9.03□□□□□ -0.96
IRF1-210ENST00000493208 RASL11AQ6T310 242 aa9.03□□□□□ -0.96
IRF1-210ENST00000493208 C9orf62Q8N4C0 152 aa9.03□□□□□ -0.96
IRF1-210ENST00000493208 C15orf54Q8N8G6 183 aa9.03□□□□□ -0.96
IRF1-210ENST00000493208 Q9UF83 564 aa9.03□□□□□ -0.96
IRF1-210ENST00000493208 FUSP35637 526 aaKnown RBP eCLIP9.02□□□□□ -0.97
IRF1-210ENST00000493208 TWIST1Q15672 202 aa9.02□□□□□ -0.97
IRF1-210ENST00000493208 Q5VSD8 79 aa9.02□□□□□ -0.97
IRF1-210ENST00000493208 ATRAIDQ6UW56 229 aa9.02□□□□□ -0.97
IRF1-210ENST00000493208 BAALCQ8WXS3 180 aa9.02□□□□□ -0.97
IRF1-210ENST00000493208 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.01□□□□□ -0.97
IRF1-210ENST00000493208 IGLV2-8P01709 118 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 GZMBP10144 247 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 NTF3P20783 257 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 XGP55808 180 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 IQCJQ1A5X6 159 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 LYZL1Q6UWQ5 148 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 NUDT10Q8NFP7 164 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 NUDT11Q96G61 164 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 NIT2Q9NQR4 276 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
IRF1-210ENST00000493208 A8MWL6 223 aa9□□□□□ -0.97
IRF1-210ENST00000493208 M0QY20 66 aa9□□□□□ -0.97
IRF1-210ENST00000493208 LECT2O14960 151 aa9□□□□□ -0.97
IRF1-210ENST00000493208 NDUFS6O75380 124 aaKnown RBP9□□□□□ -0.97
IRF1-210ENST00000493208 PLA2G1BP04054 148 aaKnown RBP9□□□□□ -0.97
IRF1-210ENST00000493208 INAFM2P0DMQ5 153 aa9□□□□□ -0.97
IRF1-210ENST00000493208 CTRLP40313 264 aa9□□□□□ -0.97
IRF1-210ENST00000493208 COTL1Q14019 142 aa9□□□□□ -0.97
IRF1-210ENST00000493208 MPV17L2Q567V2 206 aa9□□□□□ -0.97
IRF1-210ENST00000493208 SUMO4Q6EEV6 95 aa9□□□□□ -0.97
IRF1-210ENST00000493208 Q8N3U1 123 aa9□□□□□ -0.97
IRF1-210ENST00000493208 PGLYRP4Q96LB8 373 aa9□□□□□ -0.97
IRF1-210ENST00000493208 TMEM243Q9BU79 118 aa9□□□□□ -0.97
IRF1-210ENST00000493208 EIF5A2Q9GZV4 153 aaKnown RBP9□□□□□ -0.97
IRF1-210ENST00000493208 KIF25-AS1Q9Y6Z4 181 aa9□□□□□ -0.97
IRF1-210ENST00000493208 HSPG2P98160 4391 aa9□□□□□ -0.97
IRF1-210ENST00000493208 hCG_2014768A0A024R1R8 64 aa8.99□□□□□ -0.97
IRF1-210ENST00000493208 TRAV8-4A0A0B4J246 113 aa8.99□□□□□ -0.97
IRF1-210ENST00000493208 HLA-DQA1P01909 254 aa8.99□□□□□ -0.97
IRF1-210ENST00000493208 ALKAL2Q6UX46 152 aa8.99□□□□□ -0.97
IRF1-210ENST00000493208 FAM210AQ96ND0 272 aa8.99□□□□□ -0.97
IRF1-210ENST00000493208 KRTAP4-5Q9BYR2 181 aa8.99□□□□□ -0.97
IRF1-210ENST00000493208 GATCO43716 136 aaKnown RBP8.98□□□□□ -0.97
IRF1-210ENST00000493208 NKX2-5P52952 324 aaPredicted RBP8.98□□□□□ -0.97
IRF1-210ENST00000493208 CEBPGP53567 150 aa8.98□□□□□ -0.97
IRF1-210ENST00000493208 GAGE6Q13070 117 aa8.98□□□□□ -0.97
IRF1-210ENST00000493208 CT83Q5H943 113 aa8.98□□□□□ -0.97
IRF1-210ENST00000493208 CNFNQ9BYD5 112 aa8.98□□□□□ -0.97
IRF1-210ENST00000493208 TRBV20OR9-2A0A075B6H5 130 aa8.97□□□□□ -0.97
IRF1-210ENST00000493208 A0A1B0GUV1 79 aa8.97□□□□□ -0.97
IRF1-210ENST00000493208 AMTP48728 403 aa8.97□□□□□ -0.97
IRF1-210ENST00000493208 RBX1P62877 108 aa8.97□□□□□ -0.97
IRF1-210ENST00000493208 FAM231DQ6ZW35 169 aa8.97□□□□□ -0.97
IRF1-210ENST00000493208 CLRN3Q8NCR9 226 aa8.97□□□□□ -0.97
IRF1-210ENST00000493208 OCC1Q8TAD7 63 aa8.97□□□□□ -0.97
IRF1-210ENST00000493208 RNASE7Q9H1E1 156 aaKnown RBP8.97□□□□□ -0.97
IRF1-210ENST00000493208 NCR2O95944 276 aa8.96□□□□□ -0.98
IRF1-210ENST00000493208 DGAT2L7PQ6IED9 249 aa8.96□□□□□ -0.98
IRF1-210ENST00000493208 LINC00269Q8N2A0 174 aa8.96□□□□□ -0.98
IRF1-210ENST00000493208 PRR34Q9NV39 138 aa8.96□□□□□ -0.98
IRF1-210ENST00000493208 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
IRF1-210ENST00000493208 REG3AQ06141 175 aa8.95□□□□□ -0.98
IRF1-210ENST00000493208 AMMECR1LQ6DCA0 310 aa8.95□□□□□ -0.98
IRF1-210ENST00000493208 ENHOQ6UWT2 76 aa8.95□□□□□ -0.98
IRF1-210ENST00000493208 LYPD6BQ8NI32 183 aa8.95□□□□□ -0.98
IRF1-210ENST00000493208 SMIM7Q9BQ49 75 aa8.95□□□□□ -0.98
IRF1-210ENST00000493208 AP5S1Q9NUS5 200 aa8.95□□□□□ -0.98
IRF1-210ENST00000493208 APOBP04114 4563 aaKnown RBP8.94□□□□□ -0.98
IRF1-210ENST00000493208 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.94□□□□□ -0.98
IRF1-210ENST00000493208 FAM231BA6NCW3 169 aa8.94□□□□□ -0.98
IRF1-210ENST00000493208 ZNF727A8MUV8 499 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms