RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 IGHV3-35A0A0C4DH35 117 aa9.58□□□□□ -0.88
HDAC3-213ENST00000492506 MYOD1P15172 320 aa9.58□□□□□ -0.88
HDAC3-213ENST00000492506 RPL32P62910 135 aaKnown RBP9.58□□□□□ -0.88
HDAC3-213ENST00000492506 PRCDQ00LT1 54 aa9.58□□□□□ -0.88
HDAC3-213ENST00000492506 TWIST1Q15672 202 aa9.58□□□□□ -0.88
HDAC3-213ENST00000492506 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
HDAC3-213ENST00000492506 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
HDAC3-213ENST00000492506 NHP2Q9NX24 153 aaKnown RBP9.58□□□□□ -0.88
HDAC3-213ENST00000492506 UFC1Q9Y3C8 167 aa9.58□□□□□ -0.88
HDAC3-213ENST00000492506 TRBV20-1A0A075B6N2 111 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 LINC01546A6NGU7 62 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 SNAI2O43623 268 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 SLC25A5P05141 298 aaKnown RBP9.57□□□□□ -0.88
HDAC3-213ENST00000492506 MRPL23Q16540 153 aaKnown RBP9.57□□□□□ -0.88
HDAC3-213ENST00000492506 C12orf74Q32Q52 190 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 CFAP126Q5VTH2 177 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 C10orf113Q5VZT2 155 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 LINC00336Q6ZUF6 198 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 ZC2HC1AQ96GY0 325 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
HDAC3-213ENST00000492506 HSPG2P98160 4391 aa9.56□□□□□ -0.88
HDAC3-213ENST00000492506 NCR2O95944 276 aa9.56□□□□□ -0.88
HDAC3-213ENST00000492506 TEN1Q86WV5 123 aa9.56□□□□□ -0.88
HDAC3-213ENST00000492506 APRG1Q8IVJ8 170 aa9.56□□□□□ -0.88
HDAC3-213ENST00000492506 ORMDL3Q8N138 153 aa9.56□□□□□ -0.88
HDAC3-213ENST00000492506 RHODO00212 210 aa9.55□□□□□ -0.88
HDAC3-213ENST00000492506 ZNF688P0C7X2 276 aa9.55□□□□□ -0.88
HDAC3-213ENST00000492506 SH2D6Q7Z4S9 175 aa9.55□□□□□ -0.88
HDAC3-213ENST00000492506 FXYD5Q96DB9 178 aa9.55□□□□□ -0.88
HDAC3-213ENST00000492506 PRELID3AQ96N28 172 aa9.55□□□□□ -0.88
HDAC3-213ENST00000492506 TRBV25-1A0A075B6N4 114 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 DEFB4AO15263 64 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 DPM2O94777 84 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 IGKCP01834 107 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 MT-ATP8P03928 68 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 IL4P05112 153 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 GAGE2BQ13066 116 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 THAP8Q8NA92 274 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 C20orf78Q9BR46 151 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 DAZ1Q9NQZ3 744 aaKnown RBP9.54□□□□□ -0.88
HDAC3-213ENST00000492506 OTORQ9NRC9 128 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
HDAC3-213ENST00000492506 FABP5P3A8MUU1 101 aa9.53□□□□□ -0.88
HDAC3-213ENST00000492506 B5MCH6 92 aa9.53□□□□□ -0.88
HDAC3-213ENST00000492506 XGP55808 180 aa9.53□□□□□ -0.88
HDAC3-213ENST00000492506 Q86TA4 180 aa9.53□□□□□ -0.88
HDAC3-213ENST00000492506 PCP2Q8IVA1 136 aa9.53□□□□□ -0.88
HDAC3-213ENST00000492506 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
HDAC3-213ENST00000492506 F11RQ9Y624 299 aaKnown RBP9.53□□□□□ -0.88
HDAC3-213ENST00000492506 AGRNO00468 2067 aa9.52□□□□□ -0.88
HDAC3-213ENST00000492506 A0A096LNJ9 63 aa9.52□□□□□ -0.89
HDAC3-213ENST00000492506 RTL8CO15255 209 aa9.52□□□□□ -0.89
HDAC3-213ENST00000492506 SNCGO76070 127 aa9.52□□□□□ -0.89
HDAC3-213ENST00000492506 ERHP84090 104 aaKnown RBP9.52□□□□□ -0.89
HDAC3-213ENST00000492506 TTC32Q5I0X7 151 aa9.52□□□□□ -0.89
HDAC3-213ENST00000492506 LINC00479Q96M42 142 aa9.52□□□□□ -0.89
HDAC3-213ENST00000492506 SLC25A39Q9BZJ4 359 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-213ENST00000492506 IGHV3OR16-8A0A075B7F1 116 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 TRAV5A0A0B4J249 113 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 PGPA6NDG6 321 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 A8MWV9 139 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-213ENST00000492506 K7EMT4 169 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 NDUFA4O00483 81 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 UPK2O00526 184 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 TCRAP04437 139 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 IFITM1P13164 125 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 NDUFV3P56181 108 aaKnown RBP9.51□□□□□ -0.89
HDAC3-213ENST00000492506 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
HDAC3-213ENST00000492506 TRAV3A0A0B4J244 114 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 PRSS29PA6NIE9 313 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
HDAC3-213ENST00000492506 PLNP26678 52 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 FCER1GP30273 86 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 ODF1Q14990 250 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 SMIM20Q8N5G0 67 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 TMEM75Q8N9X5 138 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 Q8NAQ8 132 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 OR10J6PQ8NGY7 276 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 TMEM14CQ9P0S9 112 aa9.5□□□□□ -0.89
HDAC3-213ENST00000492506 K7ERJ3 54 aa9.49□□□□□ -0.89
HDAC3-213ENST00000492506 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-213ENST00000492506 LYPD1Q8N2G4 141 aa9.49□□□□□ -0.89
HDAC3-213ENST00000492506 TMEM116Q8NCL8 245 aa9.49□□□□□ -0.89
HDAC3-213ENST00000492506 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
HDAC3-213ENST00000492506 HIST1H4GQ99525 98 aa9.49□□□□□ -0.89
HDAC3-213ENST00000492506 SRSF8Q9BRL6 282 aaKnown RBP9.49□□□□□ -0.89
HDAC3-213ENST00000492506 TRBV7-3A0A075B6L6 115 aa9.48□□□□□ -0.89
HDAC3-213ENST00000492506 IGHV4-4A0A075B6R2 117 aa9.48□□□□□ -0.89
HDAC3-213ENST00000492506 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
HDAC3-213ENST00000492506 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
HDAC3-213ENST00000492506 ZNF138P52744 262 aa9.48□□□□□ -0.89
HDAC3-213ENST00000492506 CMC4P56277 68 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-213ENST00000492506 WT1-ASQ06250 92 aa9.48□□□□□ -0.89
HDAC3-213ENST00000492506 RBMY1FQ15415 496 aaKnown RBP9.48□□□□□ -0.89
HDAC3-213ENST00000492506 TIMM8BQ9Y5J9 83 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-213ENST00000492506 A0A087WX48 190 aa9.47□□□□□ -0.89
HDAC3-213ENST00000492506 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms