RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 DCHS2Q6V1P9 2916 aa2.14□□□□□ -2.07
PTPRC-212ENST00000491302 FABP2P12104 132 aa2.14□□□□□ -2.07
PTPRC-212ENST00000491302 AMELYQ99218 206 aa2.14□□□□□ -2.07
PTPRC-212ENST00000491302 DDA1Q9BW61 102 aa2.14□□□□□ -2.07
PTPRC-212ENST00000491302 ACANP16112 2415 aa2.14□□□□□ -2.07
PTPRC-212ENST00000491302 UNC13CQ8NB66 2214 aa2.14□□□□□ -2.07
PTPRC-212ENST00000491302 CHD3Q12873 2000 aaKnown RBP2.13□□□□□ -2.07
PTPRC-212ENST00000491302 PRRC2CQ9Y520 2896 aaKnown RBP2.13□□□□□ -2.07
PTPRC-212ENST00000491302 SPAG17Q6Q759 2223 aa2.13□□□□□ -2.07
PTPRC-212ENST00000491302 MEGF8Q7Z7M0 2845 aa2.13□□□□□ -2.07
PTPRC-212ENST00000491302 GABARAPH6UMI1 98 aa2.13□□□□□ -2.07
PTPRC-212ENST00000491302 NDUFA6P56556 154 aa2.13□□□□□ -2.07
PTPRC-212ENST00000491302 MRPS36P82909 103 aaKnown RBP2.13□□□□□ -2.07
PTPRC-212ENST00000491302 OR4B1Q8NGF8 309 aa2.13□□□□□ -2.07
PTPRC-212ENST00000491302 DOCK1Q14185 1865 aa2.13□□□□□ -2.07
PTPRC-212ENST00000491302 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.13□□□□□ -2.071e-11■■■■□ 24.8
PTPRC-212ENST00000491302 MGAM2Q2M2H8 2515 aa2.13□□□□□ -2.07
PTPRC-212ENST00000491302 MED23Q9ULK4 1368 aa2.12□□□□□ -2.07
PTPRC-212ENST00000491302 S100A11P31949 105 aa2.12□□□□□ -2.07
PTPRC-212ENST00000491302 TOMM20LQ6UXN7 152 aa2.12□□□□□ -2.07
PTPRC-212ENST00000491302 EFCAB11Q9BUY7 163 aa2.12□□□□□ -2.07
PTPRC-212ENST00000491302 ZNF469Q96JG9 3925 aaPredicted RBP2.12□□□□□ -2.07
PTPRC-212ENST00000491302 H7BYZ3 331 aa2.11□□□□□ -2.07
PTPRC-212ENST00000491302 SDC2P34741 201 aa2.11□□□□□ -2.07
PTPRC-212ENST00000491302 TPRKBQ9Y3C4 175 aa2.11□□□□□ -2.07
PTPRC-212ENST00000491302 NUP210Q8TEM1 1887 aaPredicted RBP2.11□□□□□ -2.07
PTPRC-212ENST00000491302 ZFC3H1O60293 1989 aaKnown RBP2.1□□□□□ -2.07
PTPRC-212ENST00000491302 ZANQ9Y493 2812 aa2.1□□□□□ -2.07
PTPRC-212ENST00000491302 GOLGA4Q13439 2230 aaKnown RBP2.1□□□□□ -2.07
PTPRC-212ENST00000491302 TENM1Q9UKZ4 2725 aa2.1□□□□□ -2.07
PTPRC-212ENST00000491302 SNRNP200O75643 2136 aaKnown RBP2.1□□□□□ -2.07
PTPRC-212ENST00000491302 KLF7O75840 302 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-212ENST00000491302 THEM6Q8WUY1 208 aa2.1□□□□□ -2.07
PTPRC-212ENST00000491302 RMND5BQ96G75 393 aaPredicted RBP2.1□□□□□ -2.07
PTPRC-212ENST00000491302 HSPB8Q9UJY1 196 aa2.1□□□□□ -2.07
PTPRC-212ENST00000491302 VPS13CQ709C8 3753 aa2.1□□□□□ -2.07
PTPRC-212ENST00000491302 PARP14Q460N5 1801 aa2.1□□□□□ -2.07
PTPRC-212ENST00000491302 WNK1Q9H4A3 2382 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 A0A096LPI6 279 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 C9orf170A2RU37 121 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 NCR3O14931 201 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 FABP4P15090 132 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 B2MP61769 119 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 DIRC1Q969H9 104 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 ZC2HC1AQ96GY0 325 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 OR4C12Q96R67 309 aa2.09□□□□□ -2.07
PTPRC-212ENST00000491302 EML5Q05BV3 1969 aa2.09□□□□□ -2.08
PTPRC-212ENST00000491302 ANK2Q01484 3957 aa2.08□□□□□ -2.08
PTPRC-212ENST00000491302 CST11Q9H112 138 aa2.08□□□□□ -2.08
PTPRC-212ENST00000491302 MED31Q9Y3C7 131 aa2.08□□□□□ -2.08
PTPRC-212ENST00000491302 MYH13Q9UKX3 1938 aa2.07□□□□□ -2.08
PTPRC-212ENST00000491302 C5orf58C9J3I9 102 aa2.07□□□□□ -2.08
PTPRC-212ENST00000491302 VMA21Q3ZAQ7 101 aa2.07□□□□□ -2.08
PTPRC-212ENST00000491302 SAMD13Q5VXD3 122 aa2.07□□□□□ -2.08
PTPRC-212ENST00000491302 OR9Q1Q8NGQ5 310 aa2.07□□□□□ -2.08
PTPRC-212ENST00000491302 OR5H6Q8NGV6 325 aa2.07□□□□□ -2.08
PTPRC-212ENST00000491302 GRPEL2Q8TAA5 225 aa2.07□□□□□ -2.08
PTPRC-212ENST00000491302 LXNQ9BS40 222 aa2.07□□□□□ -2.08
PTPRC-212ENST00000491302 SPEF2Q9C093 1822 aa2.06□□□□□ -2.08
PTPRC-212ENST00000491302 S100GP29377 79 aa2.06□□□□□ -2.08
PTPRC-212ENST00000491302 TMEM128Q5BJH2 165 aa2.06□□□□□ -2.08
PTPRC-212ENST00000491302 PSMF1Q92530 271 aa2.06□□□□□ -2.08
PTPRC-212ENST00000491302 PRKDCP78527 4128 aaKnown RBP2.06□□□□□ -2.08
PTPRC-212ENST00000491302 SVEP1Q4LDE5 3571 aa2.05□□□□□ -2.08
PTPRC-212ENST00000491302 JMJD7-PLA2G4BH0Y9G9 81 aa2.05□□□□□ -2.08
PTPRC-212ENST00000491302 H0YJX3 145 aa2.05□□□□□ -2.08
PTPRC-212ENST00000491302 COX6B1P14854 86 aa2.05□□□□□ -2.08
PTPRC-212ENST00000491302 POLR2HP52434 150 aaKnown RBP2.05□□□□□ -2.08
PTPRC-212ENST00000491302 CCL4L1Q8NHW4 92 aa2.05□□□□□ -2.08
PTPRC-212ENST00000491302 PRELID3AQ96N28 172 aa2.05□□□□□ -2.08
PTPRC-212ENST00000491302 SIPA1L3O60292 1781 aaPredicted RBP2.05□□□□□ -2.08
PTPRC-212ENST00000491302 PPYP01298 95 aa2.04□□□□□ -2.08
PTPRC-212ENST00000491302 MAP1AP78559 2803 aaPredicted RBP2.04□□□□□ -2.08
PTPRC-212ENST00000491302 DIAPH2-AS1Q14236 149 aa2.04□□□□□ -2.08
PTPRC-212ENST00000491302 LAMA4Q16363 1823 aa2.04□□□□□ -2.08
PTPRC-212ENST00000491302 LINC00305Q7Z4B0 112 aa2.04□□□□□ -2.08
PTPRC-212ENST00000491302 TAF9BQ9HBM6 251 aa2.04□□□□□ -2.08
PTPRC-212ENST00000491302 ABCA13Q86UQ4 5058 aa2.04□□□□□ -2.08
PTPRC-212ENST00000491302 TSTD3H0UI37 97 aa2.03□□□□□ -2.08
PTPRC-212ENST00000491302 PRB4P10163 310 aaPredicted RBP2.03□□□□□ -2.08
PTPRC-212ENST00000491302 MIR22HGQ0VDD5 57 aa2.03□□□□□ -2.08
PTPRC-212ENST00000491302 FOXI2Q6ZQN5 318 aa2.03□□□□□ -2.08
PTPRC-212ENST00000491302 SKA2Q8WVK7 121 aaPredicted RBP2.03□□□□□ -2.08
PTPRC-212ENST00000491302 ESPL1Q14674 2120 aa2.03□□□□□ -2.08
PTPRC-212ENST00000491302 HERC1Q15751 4861 aa2.03□□□□□ -2.08
PTPRC-212ENST00000491302 MUC2Q02817 5179 aa2.03□□□□□ -2.09
PTPRC-212ENST00000491302 NSD1Q96L73 2696 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-212ENST00000491302 HELZP42694 1942 aaKnown RBP2.02□□□□□ -2.09
PTPRC-212ENST00000491302 TRBV7-6A0A0J9YX20 115 aa2.02□□□□□ -2.09
PTPRC-212ENST00000491302 TPT1P13693 172 aaKnown RBP2.02□□□□□ -2.09
PTPRC-212ENST00000491302 SRP9P49458 86 aaKnown RBP2.02□□□□□ -2.09
PTPRC-212ENST00000491302 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
PTPRC-212ENST00000491302 OR5AK2Q8NH90 309 aa2.02□□□□□ -2.09
PTPRC-212ENST00000491302 KRTAP4-1Q9BYQ7 146 aa2.02□□□□□ -2.09
PTPRC-212ENST00000491302 PI4KAP42356 2102 aa2.02□□□□□ -2.09
PTPRC-212ENST00000491302 MXRA5Q9NR99 2828 aa2.01□□□□□ -2.09
PTPRC-212ENST00000491302 TRBV27A0A0K0K1C4 114 aa2.01□□□□□ -2.09
PTPRC-212ENST00000491302 GNG14A0A1W2PPG7 69 aa2.01□□□□□ -2.09
PTPRC-212ENST00000491302 IGHV3-33P01772 117 aa2.01□□□□□ -2.09
PTPRC-212ENST00000491302 TRACP01848 142 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms