RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RMI2Q96E14 147 aa11.85□□□□□ -0.51
HMGN1-219ENST00000491183 TRBV20OR9-2A0A075B6H5 130 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-219ENST00000491183 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 GNG4P50150 75 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 ELOBQ15370 118 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 ATRAIDQ6UW56 229 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 Q6ZNX1 250 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 DAZAP1Q96EP5 407 aaKnown RBP11.84□□□□□ -0.51
HMGN1-219ENST00000491183 SMIM12Q96EX1 92 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 MED9Q9NWA0 146 aa11.84□□□□□ -0.51
HMGN1-219ENST00000491183 PDE6DO43924 150 aa11.83□□□□□ -0.52
HMGN1-219ENST00000491183 SMIM17P0DL12 118 aa11.83□□□□□ -0.52
HMGN1-219ENST00000491183 BCL2P10415 239 aa11.83□□□□□ -0.52
HMGN1-219ENST00000491183 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
HMGN1-219ENST00000491183 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
HMGN1-219ENST00000491183 AP1S3Q96PC3 154 aa11.83□□□□□ -0.52
HMGN1-219ENST00000491183 TPPP3Q9BW30 176 aa11.83□□□□□ -0.52
HMGN1-219ENST00000491183 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
HMGN1-219ENST00000491183 DNAH8Q96JB1 4490 aa11.82□□□□□ -0.52
HMGN1-219ENST00000491183 MPV17L2Q567V2 206 aa11.82□□□□□ -0.52
HMGN1-219ENST00000491183 KCNIP4Q6PIL6 250 aa11.82□□□□□ -0.52
HMGN1-219ENST00000491183 M0QY20 66 aa11.81□□□□□ -0.52
HMGN1-219ENST00000491183 IFNA1P01562 189 aa11.81□□□□□ -0.52
HMGN1-219ENST00000491183 Q0VG73 95 aa11.81□□□□□ -0.52
HMGN1-219ENST00000491183 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
HMGN1-219ENST00000491183 Q6ZSA8 131 aa11.81□□□□□ -0.52
HMGN1-219ENST00000491183 Q8N976 141 aa11.81□□□□□ -0.52
HMGN1-219ENST00000491183 FAM229AH3BQW9 127 aa11.8□□□□□ -0.52
HMGN1-219ENST00000491183 C15orf54Q8N8G6 183 aa11.8□□□□□ -0.52
HMGN1-219ENST00000491183 CHCHD5Q9BSY4 110 aa11.8□□□□□ -0.52
HMGN1-219ENST00000491183 P01737 135 aa11.79□□□□□ -0.52
HMGN1-219ENST00000491183 MGPP08493 103 aa11.79□□□□□ -0.52
HMGN1-219ENST00000491183 CACNG7P62955 275 aa11.79□□□□□ -0.52
HMGN1-219ENST00000491183 SUMO4Q6EEV6 95 aa11.79□□□□□ -0.52
HMGN1-219ENST00000491183 LYZL1Q6UWQ5 148 aa11.79□□□□□ -0.52
HMGN1-219ENST00000491183 C9orf62Q8N4C0 152 aa11.79□□□□□ -0.52
HMGN1-219ENST00000491183 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-219ENST00000491183 NUDT10Q8NFP7 164 aa11.79□□□□□ -0.52
HMGN1-219ENST00000491183 NUDT11Q96G61 164 aa11.79□□□□□ -0.52
HMGN1-219ENST00000491183 F2Z2F3 143 aa11.78□□□□□ -0.52
HMGN1-219ENST00000491183 ANGP03950 147 aaKnown RBP11.78□□□□□ -0.52
HMGN1-219ENST00000491183 TMEM97Q5BJF2 176 aa11.78□□□□□ -0.52
HMGN1-219ENST00000491183 VPS13BQ7Z7G8 4022 aa11.78□□□□□ -0.52
HMGN1-219ENST00000491183 XKRY2A2RUG3 117 aa11.77□□□□□ -0.53
HMGN1-219ENST00000491183 NTF3P20783 257 aa11.77□□□□□ -0.53
HMGN1-219ENST00000491183 C1orf43Q9BWL3 253 aa11.77□□□□□ -0.53
HMGN1-219ENST00000491183 BIN3Q9NQY0 253 aa11.77□□□□□ -0.53
HMGN1-219ENST00000491183 TAGLN2P37802 199 aaKnown RBP11.76□□□□□ -0.53
HMGN1-219ENST00000491183 RBX1P62877 108 aa11.76□□□□□ -0.53
HMGN1-219ENST00000491183 GAGE6Q13070 117 aa11.76□□□□□ -0.53
HMGN1-219ENST00000491183 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
HMGN1-219ENST00000491183 TRBV25-1A0A075B6N4 114 aa11.75□□□□□ -0.53
HMGN1-219ENST00000491183 K7EN84 100 aa11.75□□□□□ -0.53
HMGN1-219ENST00000491183 CRPP02741 224 aa11.75□□□□□ -0.53
HMGN1-219ENST00000491183 NKX2-5P52952 324 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-219ENST00000491183 PKIAP61925 76 aa11.75□□□□□ -0.53
HMGN1-219ENST00000491183 IQCJQ1A5X6 159 aa11.75□□□□□ -0.53
HMGN1-219ENST00000491183 AKAP14Q86UN6 197 aa11.75□□□□□ -0.53
HMGN1-219ENST00000491183 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
HMGN1-219ENST00000491183 H7C1H1 209 aa11.74□□□□□ -0.53
HMGN1-219ENST00000491183 TRGC1P0CF51 173 aa11.74□□□□□ -0.53
HMGN1-219ENST00000491183 CTRLP40313 264 aa11.74□□□□□ -0.53
HMGN1-219ENST00000491183 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
HMGN1-219ENST00000491183 RASL11AQ6T310 242 aa11.74□□□□□ -0.53
HMGN1-219ENST00000491183 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
HMGN1-219ENST00000491183 SRRM2Q9UQ35 2752 aaKnown RBP11.73□□□□□ -0.53
HMGN1-219ENST00000491183 hCG_2014768A0A024R1R8 64 aa11.73□□□□□ -0.53
HMGN1-219ENST00000491183 IGHV1-24A0A0C4DH33 117 aa11.73□□□□□ -0.53
HMGN1-219ENST00000491183 MIAQ16674 131 aa11.73□□□□□ -0.53
HMGN1-219ENST00000491183 KRTAP26-1Q6PEX3 210 aa11.73□□□□□ -0.53
HMGN1-219ENST00000491183 ALKAL2Q6UX46 152 aa11.73□□□□□ -0.53
HMGN1-219ENST00000491183 LINC00269Q8N2A0 174 aa11.73□□□□□ -0.53
HMGN1-219ENST00000491183 DPH3P1Q9H4G8 78 aa11.73□□□□□ -0.53
HMGN1-219ENST00000491183 CLPSL2Q6UWE3 100 aa11.72□□□□□ -0.53
HMGN1-219ENST00000491183 CNFNQ9BYD5 112 aa11.72□□□□□ -0.53
HMGN1-219ENST00000491183 RPP21Q9H633 154 aaKnown RBP11.72□□□□□ -0.53
HMGN1-219ENST00000491183 NIT2Q9NQR4 276 aa11.72□□□□□ -0.53
HMGN1-219ENST00000491183 TWIST1Q15672 202 aa11.71□□□□□ -0.53
HMGN1-219ENST00000491183 SCXQ7RTU7 201 aa11.71□□□□□ -0.53
HMGN1-219ENST00000491183 LYPD6BQ8NI32 183 aa11.71□□□□□ -0.53
HMGN1-219ENST00000491183 DEFB104AQ8WTQ1 72 aa11.71□□□□□ -0.53
HMGN1-219ENST00000491183 FLG2Q5D862 2391 aaPredicted RBP11.71□□□□□ -0.54
HMGN1-219ENST00000491183 USP17L23D6RBM5 183 aa11.7□□□□□ -0.54
HMGN1-219ENST00000491183 HLA-DQA1P01909 254 aa11.7□□□□□ -0.54
HMGN1-219ENST00000491183 BLOC1S1P78537 153 aa11.7□□□□□ -0.54
HMGN1-219ENST00000491183 C14orf177Q52M58 125 aa11.7□□□□□ -0.54
HMGN1-219ENST00000491183 C20orf203Q8NBC4 194 aa11.7□□□□□ -0.54
HMGN1-219ENST00000491183 GTSF1Q8WW33 167 aa11.7□□□□□ -0.54
HMGN1-219ENST00000491183 TMEM250H0YL14 139 aa11.69□□□□□ -0.54
HMGN1-219ENST00000491183 LINC00528Q8N1L1 170 aa11.69□□□□□ -0.54
HMGN1-219ENST00000491183 PGLYRP4Q96LB8 373 aa11.69□□□□□ -0.54
HMGN1-219ENST00000491183 CHAC1Q9BUX1 264 aa11.69□□□□□ -0.54
HMGN1-219ENST00000491183 IGLV4-60A0A075B6I1 120 aa11.68□□□□□ -0.54
HMGN1-219ENST00000491183 PRSS1P07477 247 aa11.68□□□□□ -0.54
HMGN1-219ENST00000491183 GATD1Q8NB37 220 aa11.68□□□□□ -0.54
HMGN1-219ENST00000491183 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
HMGN1-219ENST00000491183 HERC1Q15751 4861 aa11.68□□□□□ -0.54
HMGN1-219ENST00000491183 A0A1B0GUV1 79 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms